data_TVD
#

_chem_comp.id                                   TVD
_chem_comp.name                                 "N-acetyl-2-(acetylamino)-2-deoxy-beta-D-glucopyranosylamine"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C10 H18 N2 O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-04-01
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       262.260
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    TVD
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5NF7
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
TVD  O7   O7   O  0  1  N  N  N  26.932   -9.654   1.444   2.721  -0.902   1.276  O7   TVD   1  
TVD  C7   C7   C  0  1  N  N  N  26.243  -10.586   1.863   2.663  -1.438   0.189  C7   TVD   2  
TVD  C8   C8   C  0  1  N  N  N  26.658  -11.473   3.032   3.911  -2.005  -0.438  C8   TVD   3  
TVD  N2   N2   N  0  1  N  N  N  25.051  -10.966   1.341   1.483  -1.532  -0.454  N2   TVD   4  
TVD  C2   C2   C  0  1  N  N  R  24.613  -10.287   0.093   0.269  -0.987   0.159  C2   TVD   5  
TVD  C1   C1   C  0  1  N  N  R  25.019  -11.129  -1.155   0.154   0.503  -0.171  C1   TVD   6  
TVD  N1   N1   N  0  1  N  N  N  26.440  -10.933  -1.431   1.296   1.220   0.404  N1   TVD   7  
TVD  C9   C9   C  0  1  N  N  N  27.139  -12.047  -1.913   1.827   2.273  -0.247  C9   TVD   8  
TVD  C10  C10  C  0  1  N  N  N  28.641  -12.037  -1.812   3.001   3.011   0.344  C10  TVD   9  
TVD  O9   O9   O  0  1  N  N  N  26.536  -12.989  -2.435   1.361   2.628  -1.309  O9   TVD  10  
TVD  C3   C3   C  0  1  N  N  R  23.095  -10.236   0.213  -0.957  -1.720  -0.394  C3   TVD  11  
TVD  O3   O3   O  0  1  N  N  N  22.828   -9.365   1.357  -0.895  -3.100  -0.027  O3   TVD  12  
TVD  C4   C4   C  0  1  N  N  S  22.521   -9.687  -1.048  -2.223  -1.090   0.195  C4   TVD  13  
TVD  C5   C5   C  0  1  N  N  R  22.988  -10.560  -2.239  -2.241   0.405  -0.137  C5   TVD  14  
TVD  C6   C6   C  0  1  N  N  N  22.514   -9.993  -3.581  -3.473   1.053   0.499  C6   TVD  15  
TVD  O6   O6   O  0  1  N  N  N  22.658   -8.563  -3.830  -3.552   2.421   0.095  O6   TVD  16  
TVD  O5   O5   O  0  1  N  N  N  24.382  -10.527  -2.229  -1.059   1.020   0.379  O5   TVD  17  
TVD  O4   O4   O  0  1  N  N  N  21.135   -9.810  -0.899  -3.376  -1.718  -0.370  O4   TVD  18  
TVD  H81  H81  H  0  1  N  N  N  27.636  -11.144   3.413   4.759  -1.840   0.226  H81  TVD  19  
TVD  H82  H82  H  0  1  N  N  N  25.908  -11.398   3.833   3.781  -3.074  -0.603  H82  TVD  20  
TVD  H83  H83  H  0  1  N  N  N  26.729  -12.517   2.693   4.095  -1.510  -1.392  H83  TVD  21  
TVD  HN2  HN2  H  0  1  N  N  N  24.491  -11.671   1.776   1.437  -1.961  -1.323  HN2  TVD  22  
TVD  H2   H2   H  0  1  N  N  N  25.033   -9.273   0.021   0.316  -1.119   1.240  H2   TVD  23  
TVD  H1   H1   H  0  1  N  N  N  24.757  -12.189  -1.019   0.149   0.637  -1.253  H1   TVD  24  
TVD  HN1  HN1  H  0  1  N  N  N  26.889  -10.052  -1.284   1.668   0.937   1.253  HN1  TVD  25  
TVD  H11  H11  H  0  1  N  N  N  29.045  -12.957  -2.259   3.839   2.324   0.463  H11  TVD  26  
TVD  H12  H12  H  0  1  N  N  N  29.039  -11.164  -2.349   3.290   3.826  -0.319  H12  TVD  27  
TVD  H13  H13  H  0  1  N  N  N  28.937  -11.982  -0.754   2.723   3.416   1.317  H13  TVD  28  
TVD  H3   H3   H  0  1  N  N  N  22.704  -11.247   0.398  -0.976  -1.632  -1.480  H3   TVD  29  
TVD  HO3  HO3  H  0  1  N  Y  N  23.207   -9.745   2.141  -1.642  -3.625  -0.345  HO3  TVD  30  
TVD  H4   H4   H  0  1  N  N  N  22.834   -8.643  -1.200  -2.228  -1.224   1.276  H4   TVD  31  
TVD  H5   H5   H  0  1  N  N  N  22.605  -11.584  -2.114  -2.278   0.537  -1.218  H5   TVD  32  
TVD  H61  H61  H  0  1  N  N  N  21.444  -10.231  -3.673  -4.370   0.526   0.174  H61  TVD  33  
TVD  H62  H62  H  0  1  N  N  N  23.075  -10.516  -4.369  -3.393   0.998   1.585  H62  TVD  34  
TVD  HO6  HO6  H  0  1  N  Y  N  22.325   -8.357  -4.695  -4.311   2.896   0.462  HO6  TVD  35  
TVD  HO4  HO4  H  0  1  N  Y  N  20.846   -9.275  -0.169  -4.215  -1.368  -0.041  HO4  TVD  36  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
TVD  O6   C6   SING  N  N   1  
TVD  C6   C5   SING  N  N   2  
TVD  O9   C9   DOUB  N  N   3  
TVD  C5   O5   SING  N  N   4  
TVD  C5   C4   SING  N  N   5  
TVD  O5   C1   SING  N  N   6  
TVD  C9   C10  SING  N  N   7  
TVD  C9   N1   SING  N  N   8  
TVD  N1   C1   SING  N  N   9  
TVD  C1   C2   SING  N  N  10  
TVD  C4   O4   SING  N  N  11  
TVD  C4   C3   SING  N  N  12  
TVD  C2   C3   SING  N  N  13  
TVD  C2   N2   SING  N  N  14  
TVD  C3   O3   SING  N  N  15  
TVD  N2   C7   SING  N  N  16  
TVD  O7   C7   DOUB  N  N  17  
TVD  C7   C8   SING  N  N  18  
TVD  C8   H81  SING  N  N  19  
TVD  C8   H82  SING  N  N  20  
TVD  C8   H83  SING  N  N  21  
TVD  N2   HN2  SING  N  N  22  
TVD  C2   H2   SING  N  N  23  
TVD  C1   H1   SING  N  N  24  
TVD  N1   HN1  SING  N  N  25  
TVD  C10  H11  SING  N  N  26  
TVD  C10  H12  SING  N  N  27  
TVD  C10  H13  SING  N  N  28  
TVD  C3   H3   SING  N  N  29  
TVD  O3   HO3  SING  N  N  30  
TVD  C4   H4   SING  N  N  31  
TVD  C5   H5   SING  N  N  32  
TVD  C6   H61  SING  N  N  33  
TVD  C6   H62  SING  N  N  34  
TVD  O6   HO6  SING  N  N  35  
TVD  O4   HO4  SING  N  N  36  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
TVD  SMILES            ACDLabs               12.01  "O=C(C)NC1C(O)C(O)C(OC1NC(C)=O)CO"  
TVD  InChI             InChI                 1.03   "InChI=1S/C10H18N2O6/c1-4(14)11-7-9(17)8(16)6(3-13)18-10(7)12-5(2)15/h6-10,13,16-17H,3H2,1-2H3,(H,11,14)(H,12,15)/t6-,7-,8-,9-,10-/m1/s1"  
TVD  InChIKey          InChI                 1.03   MVMHZICMHUYFIW-VVULQXIFSA-N  
TVD  SMILES_CANONICAL  CACTVS                3.385  "CC(=O)N[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1NC(C)=O"  
TVD  SMILES            CACTVS                3.385  "CC(=O)N[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1NC(C)=O"  
TVD  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1NC(=O)C)CO)O)O"  
TVD  SMILES            "OpenEye OEToolkits"  2.0.7  "CC(=O)NC1C(C(C(OC1NC(=O)C)CO)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
TVD  "SYSTEMATIC NAME"  ACDLabs               12.01  "N-acetyl-2-(acetylamino)-2-deoxy-beta-D-glucopyranosylamine"  
TVD  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "~{N}-[(2~{R},3~{R},4~{R},5~{S},6~{R})-2-acetamido-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-3-yl]ethanamide"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
TVD  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
TVD  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
TVD  "CARBOHYDRATE ANOMER"                  beta      PDB  ?  
TVD  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
TVD  "Create component"  2020-04-01  RCSB  
TVD  "Initial release"   2020-07-29  RCSB  
##
