data_RND
# 
_chem_comp.id                                    RND 
_chem_comp.name                                  "N-[1-(1H-indol-3-ylmethyl)piperidin-4-yl]-L-tryptophanamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H29 N5 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-12-25 
_chem_comp.pdbx_modified_date                    2014-03-07 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        415.531 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     RND 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4NYM 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
RND C01 C01 C 0 1 Y N N 35.710 30.014 24.701 -6.444 0.171  -0.631 C01 RND 1  
RND C02 C02 C 0 1 Y N N 35.641 30.062 26.141 -7.722 0.203  -0.149 C02 RND 2  
RND C03 C03 C 0 1 Y N N 34.450 29.829 26.816 -8.154 -0.744 0.770  C03 RND 3  
RND C04 C04 C 0 1 Y N N 33.316 29.536 26.078 -7.302 -1.732 1.212  C04 RND 4  
RND C05 C05 C 0 1 Y N N 33.387 29.482 24.607 -5.996 -1.784 0.735  C05 RND 5  
RND C06 C06 C 0 1 Y N N 34.554 29.717 23.945 -5.566 -0.825 -0.200 C06 RND 6  
RND N07 N07 N 0 1 Y N N 32.405 29.211 23.647 -4.932 -2.623 0.976  N07 RND 7  
RND C08 C08 C 0 1 Y N N 34.280 29.582 22.516 -4.168 -1.148 -0.497 C08 RND 8  
RND C09 C09 C 0 1 Y N N 32.921 29.269 22.425 -3.851 -2.228 0.235  C09 RND 9  
RND C10 C10 C 0 1 N N N 35.202 29.739 21.346 -3.260 -0.410 -1.446 C10 RND 10 
RND N11 N11 N 0 1 N N N 36.200 28.636 21.294 -2.738 0.794  -0.787 N11 RND 11 
RND C12 C12 C 0 1 N N N 37.170 27.959 22.201 -2.043 1.661  -1.747 C12 RND 12 
RND C13 C13 C 0 1 N N N 37.837 26.778 21.604 -1.641 2.968  -1.060 C13 RND 13 
RND C14 C14 C 0 1 N N N 38.426 27.140 20.317 -0.727 2.654  0.127  C14 RND 14 
RND C15 C15 C 0 1 N N N 37.374 27.646 19.427 -1.457 1.712  1.089  C15 RND 15 
RND C16 C16 C 0 1 N N N 36.767 28.901 19.984 -1.863 0.441  0.339  C16 RND 16 
RND N17 N17 N 0 1 N N N 39.423 28.233 20.458 0.498  2.010  -0.354 N17 RND 17 
RND C18 C18 C 0 1 N N N 40.824 28.032 20.831 1.631  2.091  0.370  C18 RND 18 
RND C19 C19 C 0 1 N N S 41.769 29.186 20.931 2.891  1.429  -0.125 C19 RND 19 
RND O20 O20 O 0 1 N N N 41.262 26.928 21.052 1.638  2.697  1.421  O20 RND 20 
RND C21 C21 C 0 1 N N N 41.679 29.955 22.264 2.840  -0.067 0.193  C21 RND 21 
RND N22 N22 N 0 1 N N N 41.599 30.068 19.845 4.055  2.031  0.539  N22 RND 22 
RND C23 C23 C 0 1 Y N N 40.471 30.725 22.742 4.040  -0.750 -0.409 C23 RND 23 
RND N24 N24 N 0 1 Y N N 38.918 31.536 24.183 5.349  -1.870 -1.809 N24 RND 24 
RND C25 C25 C 0 1 Y N N 40.023 30.735 24.066 4.094  -1.368 -1.600 C25 RND 25 
RND C26 C26 C 0 1 Y N N 39.552 31.602 22.020 5.372  -0.861 0.191  C26 RND 26 
RND C27 C27 C 0 1 Y N N 38.617 32.066 22.960 6.156  -1.577 -0.732 C27 RND 27 
RND C28 C28 C 0 1 Y N N 37.536 32.969 22.571 7.488  -1.843 -0.433 C28 RND 28 
RND C29 C29 C 0 1 Y N N 37.447 33.363 21.261 8.023  -1.403 0.757  C29 RND 29 
RND C30 C30 C 0 1 Y N N 38.382 32.899 20.303 7.246  -0.696 1.665  C30 RND 30 
RND C31 C31 C 0 1 Y N N 39.446 32.011 20.689 5.935  -0.424 1.391  C31 RND 31 
RND H1  H1  H 0 1 N N N 36.647 30.205 24.200 -6.116 0.911  -1.346 H1  RND 32 
RND H2  H2  H 0 1 N N N 36.534 30.284 26.706 -8.403 0.971  -0.486 H2  RND 33 
RND H3  H3  H 0 1 N N N 34.409 29.875 27.894 -9.167 -0.706 1.141  H3  RND 34 
RND H4  H4  H 0 1 N N N 32.379 29.347 26.580 -7.647 -2.464 1.927  H4  RND 35 
RND H5  H5  H 0 1 N N N 31.449 29.003 23.853 -4.946 -3.382 1.580  H5  RND 36 
RND H6  H6  H 0 1 N N N 32.377 29.101 21.507 -2.887 -2.714 0.238  H6  RND 37 
RND H7  H7  H 0 1 N N N 35.732 30.699 21.434 -2.430 -1.057 -1.731 H7  RND 38 
RND H8  H8  H 0 1 N N N 34.610 29.731 20.419 -3.819 -0.124 -2.336 H8  RND 39 
RND H10 H10 H 0 1 N N N 37.945 28.687 22.483 -1.150 1.154  -2.114 H10 RND 40 
RND H11 H11 H 0 1 N N N 36.630 27.632 23.101 -2.705 1.879  -2.585 H11 RND 41 
RND H12 H12 H 0 1 N N N 37.097 25.978 21.455 -1.112 3.604  -1.769 H12 RND 42 
RND H13 H13 H 0 1 N N N 38.628 26.424 22.281 -2.535 3.482  -0.706 H13 RND 43 
RND H14 H14 H 0 1 N N N 38.906 26.260 19.864 -0.472 3.579  0.645  H14 RND 44 
RND H15 H15 H 0 1 N N N 36.590 26.881 19.323 -0.795 1.451  1.915  H15 RND 45 
RND H16 H16 H 0 1 N N N 37.809 27.862 18.440 -2.347 2.207  1.477  H16 RND 46 
RND H17 H17 H 0 1 N N N 37.544 29.674 20.073 -2.396 -0.226 1.017  H17 RND 47 
RND H18 H18 H 0 1 N N N 35.974 29.254 19.308 -0.971 -0.060 -0.037 H18 RND 48 
RND H19 H19 H 0 1 N N N 39.116 29.169 20.286 0.493  1.526  -1.194 H19 RND 49 
RND H20 H20 H 0 1 N N N 42.787 28.773 20.878 2.975  1.568  -1.203 H20 RND 50 
RND H21 H21 H 0 1 N N N 41.879 29.209 23.047 2.845  -0.209 1.274  H21 RND 51 
RND H22 H22 H 0 1 N N N 42.500 30.686 22.236 1.929  -0.496 -0.225 H22 RND 52 
RND H23 H23 H 0 1 N N N 42.239 30.831 19.931 4.000  1.915  1.540  H23 RND 53 
RND H24 H24 H 0 1 N N N 41.774 29.581 18.989 4.916  1.649  0.177  H24 RND 54 
RND H26 H26 H 0 1 N N N 38.412 31.706 25.029 5.630  -2.358 -2.599 H26 RND 55 
RND H27 H27 H 0 1 N N N 40.481 30.191 24.878 3.268  -1.456 -2.290 H27 RND 56 
RND H28 H28 H 0 1 N N N 36.821 33.319 23.301 8.101  -2.392 -1.133 H28 RND 57 
RND H29 H29 H 0 1 N N N 36.657 34.033 20.956 9.058  -1.609 0.987  H29 RND 58 
RND H30 H30 H 0 1 N N N 38.295 33.215 19.274 7.681  -0.358 2.594  H30 RND 59 
RND H31 H31 H 0 1 N N N 40.158 31.663 19.955 5.336  0.126  2.102  H31 RND 60 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
RND C15 C16 SING N N 1  
RND C15 C14 SING N N 2  
RND N22 C19 SING N N 3  
RND C16 N11 SING N N 4  
RND C30 C31 DOUB Y N 5  
RND C30 C29 SING Y N 6  
RND C14 N17 SING N N 7  
RND C14 C13 SING N N 8  
RND N17 C18 SING N N 9  
RND C31 C26 SING Y N 10 
RND C18 C19 SING N N 11 
RND C18 O20 DOUB N N 12 
RND C19 C21 SING N N 13 
RND C29 C28 DOUB Y N 14 
RND N11 C10 SING N N 15 
RND N11 C12 SING N N 16 
RND C10 C08 SING N N 17 
RND C13 C12 SING N N 18 
RND C26 C23 SING Y N 19 
RND C26 C27 DOUB Y N 20 
RND C21 C23 SING N N 21 
RND C09 C08 DOUB Y N 22 
RND C09 N07 SING Y N 23 
RND C08 C06 SING Y N 24 
RND C28 C27 SING Y N 25 
RND C23 C25 DOUB Y N 26 
RND C27 N24 SING Y N 27 
RND N07 C05 SING Y N 28 
RND C06 C05 DOUB Y N 29 
RND C06 C01 SING Y N 30 
RND C25 N24 SING Y N 31 
RND C05 C04 SING Y N 32 
RND C01 C02 DOUB Y N 33 
RND C04 C03 DOUB Y N 34 
RND C02 C03 SING Y N 35 
RND C01 H1  SING N N 36 
RND C02 H2  SING N N 37 
RND C03 H3  SING N N 38 
RND C04 H4  SING N N 39 
RND N07 H5  SING N N 40 
RND C09 H6  SING N N 41 
RND C10 H7  SING N N 42 
RND C10 H8  SING N N 43 
RND C12 H10 SING N N 44 
RND C12 H11 SING N N 45 
RND C13 H12 SING N N 46 
RND C13 H13 SING N N 47 
RND C14 H14 SING N N 48 
RND C15 H15 SING N N 49 
RND C15 H16 SING N N 50 
RND C16 H17 SING N N 51 
RND C16 H18 SING N N 52 
RND N17 H19 SING N N 53 
RND C19 H20 SING N N 54 
RND C21 H21 SING N N 55 
RND C21 H22 SING N N 56 
RND N22 H23 SING N N 57 
RND N22 H24 SING N N 58 
RND N24 H26 SING N N 59 
RND C25 H27 SING N N 60 
RND C28 H28 SING N N 61 
RND C29 H29 SING N N 62 
RND C30 H30 SING N N 63 
RND C31 H31 SING N N 64 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
RND SMILES           ACDLabs              12.01 "O=C(NC3CCN(Cc1cnc2ccccc12)CC3)C(N)Cc5c4ccccc4nc5"                                                                                                                                 
RND InChI            InChI                1.03  "InChI=1S/C25H29N5O/c26-22(13-17-14-27-23-7-3-1-5-20(17)23)25(31)29-19-9-11-30(12-10-19)16-18-15-28-24-8-4-2-6-21(18)24/h1-8,14-15,19,22,27-28H,9-13,16,26H2,(H,29,31)/t22-/m0/s1" 
RND InChIKey         InChI                1.03  YLGBZXMOCLUOKZ-QFIPXVFZSA-N                                                                                                                                                        
RND SMILES_CANONICAL CACTVS               3.385 "N[C@@H](Cc1c[nH]c2ccccc12)C(=O)NC3CCN(CC3)Cc4c[nH]c5ccccc45"                                                                                                                      
RND SMILES           CACTVS               3.385 "N[CH](Cc1c[nH]c2ccccc12)C(=O)NC3CCN(CC3)Cc4c[nH]c5ccccc45"                                                                                                                        
RND SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc2c(c1)c(c[nH]2)C[C@@H](C(=O)NC3CCN(CC3)Cc4c[nH]c5c4cccc5)N"                                                                                                                  
RND SMILES           "OpenEye OEToolkits" 1.7.6 "c1ccc2c(c1)c(c[nH]2)CC(C(=O)NC3CCN(CC3)Cc4c[nH]c5c4cccc5)N"                                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
RND "SYSTEMATIC NAME" ACDLabs              12.01 "N-[1-(1H-indol-3-ylmethyl)piperidin-4-yl]-L-tryptophanamide"                          
RND "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S)-2-azanyl-3-(1H-indol-3-yl)-N-[1-(1H-indol-3-ylmethyl)piperidin-4-yl]propanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
RND "Create component" 2013-12-25 RCSB 
RND "Initial release"  2014-03-12 RCSB 
# 
