data_NQD
#

_chem_comp.id                                   NQD
_chem_comp.name                                 "(2Z,6E,10E)-13-[(2R)-6-hydroxy-2,8-dimethyl-3,4-dihydro-2H-1-benzopyran-2-yl]-2,6,10-trimethyltrideca-2,6,10-trienoic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C27 H38 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "garcinoic acid"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-05-23
_chem_comp.pdbx_modified_date                   2020-11-06
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       426.588
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    NQD
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6P2B
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
NQD  C12  C1   C  0  1  N  N  N  11.607  35.988  22.022   -2.269   0.565   0.965  C12  NQD   1  
NQD  C11  C2   C  0  1  N  N  N  10.899  35.146  20.946   -3.759   0.500   1.178  C11  NQD   2  
NQD  C01  C3   C  0  1  N  N  N   8.745  36.291  21.484   -3.529  -1.922   1.385  C01  NQD   3  
NQD  C02  C4   C  0  1  N  N  N   9.587  35.273  20.704   -4.335  -0.649   1.431  C02  NQD   4  
NQD  C03  C5   C  0  1  N  N  N   8.933  34.384  19.626   -5.803  -0.698   1.769  C03  NQD   5  
NQD  C04  C6   C  0  1  N  N  N   9.062  32.892  19.918   -6.608  -0.989   0.502  C04  NQD   6  
NQD  C05  C7   C  0  1  N  N  N  10.471  32.430  19.541   -8.076  -1.038   0.840  C05  NQD   7  
NQD  C06  C8   C  0  1  N  N  N  11.103  31.412  20.099   -8.935  -0.257   0.190  C06  NQD   8  
NQD  C07  C9   C  0  1  N  N  N  12.508  31.094  19.589  -10.383  -0.218   0.607  C07  NQD   9  
NQD  C08  C10  C  0  1  N  N  N  10.514  30.531  21.213   -8.472   0.567  -0.936  C08  NQD  10  
NQD  C13  C11  C  0  1  N  N  N  11.938  34.978  23.135   -1.975   1.178  -0.405  C13  NQD  11  
NQD  C14  C12  C  0  1  N  N  N  13.045  35.404  24.127   -0.485   1.244  -0.618  C14  NQD  12  
NQD  C15  C13  C  0  1  N  N  N  14.228  36.261  23.686    0.301   2.414  -0.087  C15  NQD  13  
NQD  C16  C14  C  0  1  N  N  N  12.916  34.986  25.390    0.127   0.283  -1.265  C16  NQD  14  
NQD  C17  C15  C  0  1  N  N  N  13.918  35.273  26.515    1.630   0.284  -1.370  C17  NQD  15  
NQD  C18  C16  C  0  1  N  N  N  13.278  34.796  27.840    2.189  -0.981  -0.716  C18  NQD  16  
NQD  C19  C17  C  0  1  N  N  R  13.488  33.310  28.256    3.715  -0.980  -0.823  C19  NQD  17  
NQD  C20  C18  C  0  1  N  N  N  12.735  33.695  29.558    4.129  -0.820  -2.287  C20  NQD  18  
NQD  C21  C19  C  0  1  N  N  N  14.971  33.576  28.136    4.273  -2.297  -0.269  C21  NQD  19  
NQD  C22  C20  C  0  1  N  N  N  15.627  32.290  27.728    5.787  -2.310  -0.493  C22  NQD  20  
NQD  C23  C21  C  0  1  Y  N  N  14.790  31.593  26.638    6.380  -1.004  -0.029  C23  NQD  21  
NQD  C24  C22  C  0  1  Y  N  N  15.461  30.614  25.890    7.743  -0.939   0.209  C24  NQD  22  
NQD  C25  C23  C  0  1  Y  N  N  14.792  29.925  24.890    8.322   0.246   0.634  C25  NQD  23  
NQD  C26  C24  C  0  1  Y  N  N  13.434  30.201  24.613    7.535   1.372   0.821  C26  NQD  24  
NQD  C27  C25  C  0  1  Y  N  N  12.759  31.183  25.352    6.176   1.308   0.586  C27  NQD  25  
NQD  C28  C26  C  0  1  Y  N  N  13.442  31.884  26.375    5.593   0.119   0.161  C28  NQD  26  
NQD  C30  C27  C  0  1  N  N  N  11.289  31.492  25.039    5.321   2.532   0.789  C30  NQD  27  
NQD  O09  O1   O  0  1  N  N  N  10.897  29.341  21.322   -8.267   1.754  -0.775  O09  NQD  28  
NQD  O10  O2   O  0  1  N  N  N   9.666  30.956  22.040   -8.276   0.007  -2.146  O10  NQD  29  
NQD  O29  O3   O  0  1  N  N  N  12.735  32.901  27.132    4.250   0.096  -0.052  O29  NQD  30  
NQD  O31  O4   O  0  1  N  N  N  15.491  28.966  24.165    9.661   0.304   0.867  O31  NQD  31  
NQD  H1   H1   H  0  1  N  N  N  12.525  36.441  21.621   -1.817   1.181   1.743  H1   NQD  32  
NQD  H2   H2   H  0  1  N  N  N  10.942  36.779  22.398   -1.851  -0.440   1.010  H2   NQD  33  
NQD  H3   H3   H  0  1  N  N  N  11.474  34.435  20.371   -4.353   1.400   1.121  H3   NQD  34  
NQD  H4   H4   H  0  1  N  N  N   9.386  36.824  22.202   -3.037  -2.075   2.345  H4   NQD  35  
NQD  H5   H5   H  0  1  N  N  N   8.300  37.013  20.783   -4.191  -2.763   1.177  H5   NQD  36  
NQD  H6   H6   H  0  1  N  N  N   7.945  35.766  22.027   -2.778  -1.848   0.599  H6   NQD  37  
NQD  H7   H7   H  0  1  N  N  N   9.415  34.594  18.660   -5.981  -1.486   2.502  H7   NQD  38  
NQD  H8   H8   H  0  1  N  N  N   7.864  34.637  19.565   -6.112   0.261   2.185  H8   NQD  39  
NQD  H9   H9   H  0  1  N  N  N   8.321  32.335  19.326   -6.430  -0.201  -0.231  H9   NQD  40  
NQD  H10  H10  H  0  1  N  N  N   8.888  32.710  20.989   -6.299  -1.948   0.086  H10  NQD  41  
NQD  H11  H11  H  0  1  N  N  N  10.986  32.975  18.763   -8.431  -1.707   1.610  H11  NQD  42  
NQD  H12  H12  H  0  1  N  N  N  12.911  30.230  20.138  -10.524   0.561   1.357  H12  NQD  43  
NQD  H13  H13  H  0  1  N  N  N  12.464  30.858  18.516  -11.006  -0.003  -0.261  H13  NQD  44  
NQD  H14  H14  H  0  1  N  N  N  13.161  31.965  19.746  -10.666  -1.182   1.028  H14  NQD  45  
NQD  H15  H15  H  0  1  N  N  N  11.019  34.800  23.712   -2.427   0.562  -1.183  H15  NQD  46  
NQD  H16  H16  H  0  1  N  N  N  12.258  34.041  22.656   -2.393   2.184  -0.451  H16  NQD  47  
NQD  H17  H17  H  0  1  N  N  N  14.889  36.444  24.546   -0.372   3.102   0.424  H17  NQD  48  
NQD  H18  H18  H  0  1  N  N  N  14.788  35.736  22.898    1.056   2.057   0.613  H18  NQD  49  
NQD  H19  H19  H  0  1  N  N  N  13.860  37.221  23.296    0.788   2.931  -0.914  H19  NQD  50  
NQD  H20  H20  H  0  1  N  N  N  12.041  34.403  25.637   -0.445  -0.510  -1.722  H20  NQD  51  
NQD  H21  H21  H  0  1  N  N  N  14.855  34.726  26.332    1.921   0.309  -2.420  H21  NQD  52  
NQD  H22  H22  H  0  1  N  N  N  14.127  36.352  26.566    2.030   1.162  -0.862  H22  NQD  53  
NQD  H23  H23  H  0  1  N  N  N  13.687  35.423  28.646    1.898  -1.006   0.334  H23  NQD  54  
NQD  H24  H24  H  0  1  N  N  N  12.194  34.964  27.759    1.790  -1.859  -1.224  H24  NQD  55  
NQD  H25  H25  H  0  1  N  N  N  13.462  33.987  30.330    3.739   0.121  -2.674  H25  NQD  56  
NQD  H26  H26  H  0  1  N  N  N  12.058  34.538  29.354    5.216  -0.819  -2.360  H26  NQD  57  
NQD  H27  H27  H  0  1  N  N  N  12.151  32.833  29.912    3.726  -1.648  -2.871  H27  NQD  58  
NQD  H28  H28  H  0  1  N  N  N  15.372  33.912  29.104    4.059  -2.368   0.797  H28  NQD  59  
NQD  H29  H29  H  0  1  N  N  N  15.154  34.349  27.375    3.817  -3.138  -0.792  H29  NQD  60  
NQD  H30  H30  H  0  1  N  N  N  15.708  31.629  28.603    6.230  -3.131   0.071  H30  NQD  61  
NQD  H31  H31  H  0  1  N  N  N  16.632  32.503  27.335    5.996  -2.445  -1.555  H31  NQD  62  
NQD  H32  H32  H  0  1  N  N  N  16.499  30.397  26.093    8.356  -1.816   0.063  H32  NQD  63  
NQD  H33  H33  H  0  1  N  N  N  12.918  29.658  23.835    7.983   2.297   1.151  H33  NQD  64  
NQD  H34  H34  H  0  1  N  N  N  10.640  30.848  25.651    5.272   3.099  -0.140  H34  NQD  65  
NQD  H35  H35  H  0  1  N  N  N  11.079  32.547  25.268    4.317   2.228   1.083  H35  NQD  66  
NQD  H36  H36  H  0  1  N  N  N  11.093  31.302  23.973    5.757   3.153   1.571  H36  NQD  67  
NQD  H37  H37  H  0  1  N  N  N   9.441  30.262  22.649   -7.971   0.589  -2.855  H37  NQD  68  
NQD  H38  H38  H  0  1  N  N  N  16.384  28.915  24.485   10.184   0.556   0.094  H38  NQD  69  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
NQD  C05  C04  SING  N  N   1  
NQD  C05  C06  DOUB  N  Z   2  
NQD  C07  C06  SING  N  N   3  
NQD  C03  C04  SING  N  N   4  
NQD  C03  C02  SING  N  N   5  
NQD  C06  C08  SING  N  N   6  
NQD  C02  C11  DOUB  N  E   7  
NQD  C02  C01  SING  N  N   8  
NQD  C11  C12  SING  N  N   9  
NQD  C08  O09  DOUB  N  N  10  
NQD  C08  O10  SING  N  N  11  
NQD  C12  C13  SING  N  N  12  
NQD  C13  C14  SING  N  N  13  
NQD  C15  C14  SING  N  N  14  
NQD  C14  C16  DOUB  N  E  15  
NQD  O31  C25  SING  N  N  16  
NQD  C26  C25  DOUB  Y  N  17  
NQD  C26  C27  SING  Y  N  18  
NQD  C25  C24  SING  Y  N  19  
NQD  C30  C27  SING  N  N  20  
NQD  C27  C28  DOUB  Y  N  21  
NQD  C16  C17  SING  N  N  22  
NQD  C24  C23  DOUB  Y  N  23  
NQD  C28  C23  SING  Y  N  24  
NQD  C28  O29  SING  N  N  25  
NQD  C17  C18  SING  N  N  26  
NQD  C23  C22  SING  N  N  27  
NQD  O29  C19  SING  N  N  28  
NQD  C22  C21  SING  N  N  29  
NQD  C18  C19  SING  N  N  30  
NQD  C21  C19  SING  N  N  31  
NQD  C19  C20  SING  N  N  32  
NQD  C12  H1   SING  N  N  33  
NQD  C12  H2   SING  N  N  34  
NQD  C11  H3   SING  N  N  35  
NQD  C01  H4   SING  N  N  36  
NQD  C01  H5   SING  N  N  37  
NQD  C01  H6   SING  N  N  38  
NQD  C03  H7   SING  N  N  39  
NQD  C03  H8   SING  N  N  40  
NQD  C04  H9   SING  N  N  41  
NQD  C04  H10  SING  N  N  42  
NQD  C05  H11  SING  N  N  43  
NQD  C07  H12  SING  N  N  44  
NQD  C07  H13  SING  N  N  45  
NQD  C07  H14  SING  N  N  46  
NQD  C13  H15  SING  N  N  47  
NQD  C13  H16  SING  N  N  48  
NQD  C15  H17  SING  N  N  49  
NQD  C15  H18  SING  N  N  50  
NQD  C15  H19  SING  N  N  51  
NQD  C16  H20  SING  N  N  52  
NQD  C17  H21  SING  N  N  53  
NQD  C17  H22  SING  N  N  54  
NQD  C18  H23  SING  N  N  55  
NQD  C18  H24  SING  N  N  56  
NQD  C20  H25  SING  N  N  57  
NQD  C20  H26  SING  N  N  58  
NQD  C20  H27  SING  N  N  59  
NQD  C21  H28  SING  N  N  60  
NQD  C21  H29  SING  N  N  61  
NQD  C22  H30  SING  N  N  62  
NQD  C22  H31  SING  N  N  63  
NQD  C24  H32  SING  N  N  64  
NQD  C26  H33  SING  N  N  65  
NQD  C30  H34  SING  N  N  66  
NQD  C30  H35  SING  N  N  67  
NQD  C30  H36  SING  N  N  68  
NQD  O10  H37  SING  N  N  69  
NQD  O31  H38  SING  N  N  70  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
NQD  SMILES            ACDLabs               12.01  "C(C\C(=C\CCC2(C)CCc1cc(cc(c1O2)C)O)C)[C@H]=C(C)CC\C=C(/C(=O)O)C"  
NQD  InChI             InChI                 1.03   "InChI=1S/C27H38O4/c1-19(11-7-13-21(3)26(29)30)9-6-10-20(2)12-8-15-27(5)16-14-23-18-24(28)17-22(4)25(23)31-27/h9,12-13,17-18,28H,6-8,10-11,14-16H2,1-5H3,(H,29,30)/b19-9+,20-12+,21-13-/t27-/m1/s1"  
NQD  InChIKey          InChI                 1.03   QOFWRHWADNWKSU-HGPKLCRWSA-N  
NQD  SMILES_CANONICAL  CACTVS                3.385  "C\C(CC\C=C(\C)C(O)=O)=C/CC\C(C)=C\CC[C@]1(C)CCc2cc(O)cc(C)c2O1"  
NQD  SMILES            CACTVS                3.385  "CC(CCC=C(C)C(O)=O)=CCCC(C)=CCC[C]1(C)CCc2cc(O)cc(C)c2O1"  
NQD  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cc1cc(cc2c1O[C@](CC2)(C)CC/C=C(\C)/CC/C=C(\C)/CC/C=C(/C)\C(=O)O)O"  
NQD  SMILES            "OpenEye OEToolkits"  2.0.7  "Cc1cc(cc2c1OC(CC2)(C)CCC=C(C)CCC=C(C)CCC=C(C)C(=O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
NQD  "SYSTEMATIC NAME"  ACDLabs               12.01  "(2Z,6E,10E)-13-[(2R)-6-hydroxy-2,8-dimethyl-3,4-dihydro-2H-1-benzopyran-2-yl]-2,6,10-trimethyltrideca-2,6,10-trienoic acid"  
NQD  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(2~{Z},6~{E},10~{E})-13-[(2~{R})-2,8-dimethyl-6-oxidanyl-3,4-dihydrochromen-2-yl]-2,6,10-trimethyl-trideca-2,6,10-trienoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
NQD  "Create component"  2019-05-23  RCSB  
NQD  "Initial release"   2020-04-01  RCSB  
NQD  "Modify synonyms"   2020-11-06  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     NQD
_pdbx_chem_comp_synonyms.name        "garcinoic acid"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
