data_JDD
# 
_chem_comp.id                                    JDD 
_chem_comp.name                                  "N-[2-(methylamino)-2-oxidanylidene-ethyl]-2-(4-pyrazol-1-ylphenyl)-N-(1-pyridin-2-ylpiperidin-4-yl)ethanamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H28 N6 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-03-22 
_chem_comp.pdbx_modified_date                    2016-11-25 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        432.518 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     JDD 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5G0V 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
JDD O1   O1   O 0 1 N N N 23.818 -26.985 22.810 0.920  1.457  1.170  O1   JDD 1  
JDD C13  C13  C 0 1 N N N 23.330 -26.288 21.932 0.329  1.436  0.111  C13  JDD 2  
JDD C14  C14  C 0 1 N N N 23.858 -26.343 20.509 1.018  0.921  -1.127 C14  JDD 3  
JDD C15  C15  C 0 1 Y N N 25.022 -27.284 20.288 2.421  0.497  -0.781 C15  JDD 4  
JDD C20  C20  C 0 1 Y N N 24.877 -28.414 19.489 2.671  -0.803 -0.381 C20  JDD 5  
JDD C19  C19  C 0 1 Y N N 25.940 -29.276 19.268 3.957  -1.195 -0.063 C19  JDD 6  
JDD C18  C18  C 0 1 Y N N 27.191 -28.986 19.808 4.999  -0.282 -0.146 C18  JDD 7  
JDD N4   N4   N 0 1 Y N N 28.311 -29.827 19.516 6.306  -0.677 0.176  N4   JDD 8  
JDD N5   N5   N 0 1 Y N N 28.548 -30.224 18.234 6.702  -1.954 0.592  N5   JDD 9  
JDD C23  C23  C 0 1 Y N N 29.653 -30.957 18.322 7.994  -1.935 0.796  C23  JDD 10 
JDD C22  C22  C 0 1 Y N N 30.136 -31.023 19.625 8.463  -0.647 0.517  C22  JDD 11 
JDD C21  C21  C 0 1 Y N N 29.268 -30.277 20.365 7.407  0.106  0.133  C21  JDD 12 
JDD C17  C17  C 0 1 Y N N 27.361 -27.834 20.575 4.746  1.023  -0.547 C17  JDD 13 
JDD C16  C16  C 0 1 Y N N 26.284 -26.988 20.795 3.459  1.407  -0.869 C16  JDD 14 
JDD N1   N1   N 0 1 N N N 22.303 -25.423 22.178 -0.946 1.869  0.043  N1   JDD 15 
JDD C2   C2   C 0 1 N N N 21.721 -25.279 23.504 -1.631 1.927  -1.251 C2   JDD 16 
JDD C1   C1   C 0 1 N N N 22.628 -24.659 24.553 -1.932 0.528  -1.723 C1   JDD 17 
JDD O    O    O 0 1 N N N 23.595 -23.960 24.240 -1.505 -0.425 -1.107 O    JDD 18 
JDD N    N    N 0 1 N N N 22.347 -24.996 25.807 -2.676 0.336  -2.830 N    JDD 19 
JDD C    C    C 0 1 N N N 23.350 -25.495 26.730 -2.969 -1.024 -3.290 C    JDD 20 
JDD C3   C3   C 0 1 N N N 21.740 -24.615 21.071 -1.646 2.281  1.262  C3   JDD 21 
JDD C7   C7   C 0 1 N N N 22.294 -23.191 21.067 -1.642 1.127  2.269  C7   JDD 22 
JDD C6   C6   C 0 1 N N N 21.685 -22.390 19.914 -2.401 -0.063 1.676  C6   JDD 23 
JDD N2   N2   N 0 1 N N N 20.215 -22.427 19.936 -3.780 0.338  1.369  N2   JDD 24 
JDD C5   C5   C 0 1 N N N 19.678 -23.792 19.909 -3.810 1.413  0.368  C5   JDD 25 
JDD C4   C4   C 0 1 N N N 20.213 -24.615 21.084 -3.093 2.647  0.922  C4   JDD 26 
JDD C8   C8   C 0 1 Y N N 19.455 -21.391 20.443 -4.534 -0.752 0.951  C8   JDD 27 
JDD N3   N3   N 0 1 Y N N 20.010 -20.170 20.409 -3.973 -1.949 0.879  N3   JDD 28 
JDD C12  C12  C 0 1 Y N N 19.279 -19.137 20.863 -4.654 -3.010 0.488  C12  JDD 29 
JDD C11  C11  C 0 1 Y N N 18.020 -19.273 21.412 -5.985 -2.907 0.137  C11  JDD 30 
JDD C10  C10  C 0 1 Y N N 17.457 -20.529 21.442 -6.611 -1.669 0.198  C10  JDD 31 
JDD C9   C9   C 0 1 Y N N 18.159 -21.617 20.951 -5.873 -0.577 0.618  C9   JDD 32 
JDD H141 H141 H 0 0 N N N 23.034 -26.661 19.853 0.466  0.067  -1.520 H141 JDD 33 
JDD H142 H142 H 0 0 N N N 24.181 -25.330 20.227 1.051  1.709  -1.878 H142 JDD 34 
JDD H20  H20  H 0 1 N N N 23.920 -28.623 19.033 1.859  -1.513 -0.317 H20  JDD 35 
JDD H16  H16  H 0 1 N N N 26.427 -26.085 21.369 3.262  2.420  -1.186 H16  JDD 36 
JDD H19  H19  H 0 1 N N N 25.799 -30.170 18.679 4.151  -2.211 0.249  H19  JDD 37 
JDD H17  H17  H 0 1 N N N 28.328 -27.601 20.996 5.555  1.735  -0.612 H17  JDD 38 
JDD H21  H21  H 0 1 N N N 29.330 -30.082 21.425 7.438  1.147  -0.155 H21  JDD 39 
JDD H23  H23  H 0 1 N N N 30.122 -31.445 17.480 8.596  -2.770 1.125  H23  JDD 40 
JDD H22  H22  H 0 1 N N N 31.010 -31.552 19.975 9.488  -0.313 0.592  H22  JDD 41 
JDD H21C H21C H 0 0 N N N 20.825 -24.647 23.414 -2.562 2.483  -1.144 H21C JDD 42 
JDD H22C H22C H 0 0 N N N 21.430 -26.279 23.857 -0.991 2.427  -1.979 H22C JDD 43 
JDD H3   H3   H 0 1 N N N 22.053 -25.084 20.126 -1.143 3.145  1.696  H3   JDD 44 
JDD H    H    H 0 1 N N N 21.405 -24.902 26.129 -3.018 1.099  -3.323 H    JDD 45 
JDD HC1  HC1  H 0 1 N N N 22.882 -25.705 27.703 -2.036 -1.543 -3.507 HC1  JDD 46 
JDD HC2  HC2  H 0 1 N N N 23.790 -26.420 26.328 -3.511 -1.561 -2.511 HC2  JDD 47 
JDD HC3  HC3  H 0 1 N N N 24.139 -24.739 26.858 -3.579 -0.979 -4.192 HC3  JDD 48 
JDD H71C H71C H 0 0 N N N 22.045 -22.702 22.020 -0.614 0.833  2.482  H71C JDD 49 
JDD H72C H72C H 0 0 N N N 23.387 -23.227 20.947 -2.129 1.446  3.190  H72C JDD 50 
JDD H41C H41C H 0 0 N N N 19.848 -25.649 21.000 -3.603 2.990  1.822  H41C JDD 51 
JDD H42C H42C H 0 0 N N N 19.857 -24.176 22.028 -3.102 3.439  0.173  H42C JDD 52 
JDD H61C H61C H 0 0 N N N 22.016 -21.344 19.994 -1.906 -0.391 0.762  H61C JDD 53 
JDD H62C H62C H 0 0 N N N 22.037 -22.814 18.962 -2.412 -0.881 2.396  H62C JDD 54 
JDD H51C H51C H 0 0 N N N 18.581 -23.748 19.971 -3.308 1.078  -0.539 H51C JDD 55 
JDD H52C H52C H 0 0 N N N 19.973 -24.276 18.967 -4.845 1.666  0.139  H52C JDD 56 
JDD H9   H9   H 0 1 N N N 17.728 -22.607 20.957 -6.330 0.400  0.682  H9   JDD 57 
JDD H12  H12  H 0 1 N N N 19.701 -18.145 20.794 -4.163 -3.971 0.442  H12  JDD 58 
JDD H11  H11  H 0 1 N N N 17.491 -18.418 21.807 -6.533 -3.781 -0.183 H11  JDD 59 
JDD H10  H10  H 0 1 N N N 16.466 -20.666 21.849 -7.651 -1.562 -0.072 H10  JDD 60 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
JDD O1  C13  DOUB N N 1  
JDD C13 C14  SING N N 2  
JDD C13 N1   SING N N 3  
JDD C14 C15  SING N N 4  
JDD C15 C20  SING Y N 5  
JDD C15 C16  DOUB Y N 6  
JDD C20 C19  DOUB Y N 7  
JDD C19 C18  SING Y N 8  
JDD C18 N4   SING N N 9  
JDD C18 C17  DOUB Y N 10 
JDD N4  N5   SING Y N 11 
JDD N4  C21  SING Y N 12 
JDD N5  C23  DOUB Y N 13 
JDD C23 C22  SING Y N 14 
JDD C22 C21  DOUB Y N 15 
JDD C17 C16  SING Y N 16 
JDD N1  C2   SING N N 17 
JDD N1  C3   SING N N 18 
JDD C2  C1   SING N N 19 
JDD C1  O    DOUB N N 20 
JDD C1  N    SING N N 21 
JDD N   C    SING N N 22 
JDD C3  C7   SING N N 23 
JDD C3  C4   SING N N 24 
JDD C7  C6   SING N N 25 
JDD C6  N2   SING N N 26 
JDD N2  C5   SING N N 27 
JDD N2  C8   SING N N 28 
JDD C5  C4   SING N N 29 
JDD C8  N3   DOUB Y N 30 
JDD C8  C9   SING Y N 31 
JDD N3  C12  SING Y N 32 
JDD C12 C11  DOUB Y N 33 
JDD C11 C10  SING Y N 34 
JDD C10 C9   DOUB Y N 35 
JDD C14 H141 SING N N 36 
JDD C14 H142 SING N N 37 
JDD C20 H20  SING N N 38 
JDD C16 H16  SING N N 39 
JDD C19 H19  SING N N 40 
JDD C17 H17  SING N N 41 
JDD C21 H21  SING N N 42 
JDD C23 H23  SING N N 43 
JDD C22 H22  SING N N 44 
JDD C2  H21C SING N N 45 
JDD C2  H22C SING N N 46 
JDD C3  H3   SING N N 47 
JDD N   H    SING N N 48 
JDD C   HC1  SING N N 49 
JDD C   HC2  SING N N 50 
JDD C   HC3  SING N N 51 
JDD C7  H71C SING N N 52 
JDD C7  H72C SING N N 53 
JDD C4  H41C SING N N 54 
JDD C4  H42C SING N N 55 
JDD C6  H61C SING N N 56 
JDD C6  H62C SING N N 57 
JDD C5  H51C SING N N 58 
JDD C5  H52C SING N N 59 
JDD C9  H9   SING N N 60 
JDD C12 H12  SING N N 61 
JDD C11 H11  SING N N 62 
JDD C10 H10  SING N N 63 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
JDD InChI            InChI                1.03  "InChI=1S/C24H28N6O2/c1-25-23(31)18-29(20-10-15-28(16-11-20)22-5-2-3-12-26-22)24(32)17-19-6-8-21(9-7-19)30-14-4-13-27-30/h2-9,12-14,20H,10-11,15-18H2,1H3,(H,25,31)" 
JDD InChIKey         InChI                1.03  YEXLLXYWKQMRML-UHFFFAOYSA-N                                                                                                                                          
JDD SMILES_CANONICAL CACTVS               3.385 "CNC(=O)CN(C1CCN(CC1)c2ccccn2)C(=O)Cc3ccc(cc3)n4cccn4"                                                                                                               
JDD SMILES           CACTVS               3.385 "CNC(=O)CN(C1CCN(CC1)c2ccccn2)C(=O)Cc3ccc(cc3)n4cccn4"                                                                                                               
JDD SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CNC(=O)CN(C1CCN(CC1)c2ccccn2)C(=O)Cc3ccc(cc3)n4cccn4"                                                                                                               
JDD SMILES           "OpenEye OEToolkits" 1.7.6 "CNC(=O)CN(C1CCN(CC1)c2ccccn2)C(=O)Cc3ccc(cc3)n4cccn4"                                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
JDD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "N-[2-(methylamino)-2-oxidanylidene-ethyl]-2-(4-pyrazol-1-ylphenyl)-N-(1-pyridin-2-ylpiperidin-4-yl)ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
JDD "Create component" 2016-03-22 EBI  
JDD "Initial release"  2016-11-30 RCSB 
# 
