data_IKD
# 
_chem_comp.id                                    IKD 
_chem_comp.name                                  "2-[4-[[4-[(3-~{tert}-butyl-1~{H}-pyrazol-5-yl)amino]pyrimidin-2-yl]amino]phenyl]ethanenitrile" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H21 N7" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-08-01 
_chem_comp.pdbx_modified_date                    2023-08-11 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        347.417 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     IKD 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8Q1Z 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
IKD N1  N1  N 0 1 N N N 10.035 16.455 7.566  -2.728 -2.510 0.146  N1  IKD 1  
IKD N3  N2  N 0 1 N N N 12.479 19.521 10.006 0.957  0.395  0.040  N3  IKD 2  
IKD C4  C1  C 0 1 N N N 4.809  19.413 8.451  -3.998 2.696  -1.347 C4  IKD 3  
IKD C5  C2  C 0 1 Y N N 7.176  18.606 8.233  -4.393 0.663  0.017  C5  IKD 4  
IKD C6  C3  C 0 1 Y N N 8.500  18.241 8.553  -3.228 -0.104 0.109  C6  IKD 5  
IKD C7  C4  C 0 1 Y N N 8.848  17.201 7.691  -3.589 -1.417 0.078  C7  IKD 6  
IKD C8  C5  C 0 1 Y N N 11.253 16.750 8.182  -1.356 -2.316 0.102  C8  IKD 7  
IKD C10 C6  C 0 1 Y N N 13.452 16.300 8.891  0.873  -3.166 0.022  C10 IKD 8  
IKD C13 C7  C 0 1 Y N N 11.338 20.082 12.132 2.954  1.641  0.581  C13 IKD 9  
IKD C15 C8  C 0 1 Y N N 9.204  21.232 12.065 5.043  1.053  -0.429 C15 IKD 10 
IKD C17 C9  C 0 1 N N N 8.228  22.267 14.117 7.265  0.500  0.394  C17 IKD 11 
IKD C1  C10 C 0 1 N N N 6.674  21.044 8.238  -3.546 2.721  1.110  C1  IKD 12 
IKD C2  C11 C 0 1 N N N 6.274  19.684 8.816  -4.458 2.168  0.014  C2  IKD 13 
IKD C3  C12 C 0 1 N N N 6.400  19.732 10.344 -5.898 2.617  0.274  C3  IKD 14 
IKD C9  C13 C 0 1 Y N N 12.328 15.868 8.246  -0.486 -3.408 0.066  C9  IKD 15 
IKD N2  N3  N 0 1 Y N N 13.538 17.497 9.487  1.309  -1.915 0.016  N2  IKD 16 
IKD C11 C14 C 0 1 Y N N 12.456 18.300 9.392  0.461  -0.898 0.046  C11 IKD 17 
IKD C12 C15 C 0 1 Y N N 11.428 20.128 10.740 2.329  0.617  -0.119 C12 IKD 18 
IKD C14 C16 C 0 1 Y N N 10.244 20.639 12.776 4.308  1.857  0.423  C14 IKD 19 
IKD C16 C17 C 0 1 N N N 7.989  21.830 12.747 6.522  1.292  -0.600 C16 IKD 20 
IKD N4  N4  N 0 1 N N N 8.439  22.705 15.152 7.839  -0.112 1.160  N4  IKD 21 
IKD C18 C18 C 0 1 Y N N 9.297  21.257 10.687 4.423  0.035  -1.131 C18 IKD 22 
IKD C19 C19 C 0 1 Y N N 10.383 20.715 10.026 3.069  -0.186 -0.977 C19 IKD 23 
IKD N5  N5  N 0 1 Y N N 11.314 17.953 8.761  -0.849 -1.087 0.089  N5  IKD 24 
IKD N6  N6  N 0 1 Y N N 7.780  16.997 6.907  -4.942 -1.465 -0.030 N6  IKD 25 
IKD N7  N7  N 0 1 Y N N 6.761  17.852 7.210  -5.416 -0.147 -0.071 N7  IKD 26 
IKD H1  H1  H 0 1 N N N 10.003 15.642 6.985  -3.088 -3.407 0.227  H1  IKD 27 
IKD H2  H2  H 0 1 N N N 13.329 20.043 9.929  0.353  1.147  0.145  H2  IKD 28 
IKD H3  H3  H 0 1 N N N 4.172  20.201 8.880  -4.648 2.302  -2.128 H3  IKD 29 
IKD H4  H4  H 0 1 N N N 4.699  19.408 7.357  -4.045 3.785  -1.349 H4  IKD 30 
IKD H5  H5  H 0 1 N N N 4.505  18.436 8.855  -2.972 2.376  -1.532 H5  IKD 31 
IKD H6  H6  H 0 1 N N N 9.123  18.681 9.317  -2.221 0.277  0.190  H6  IKD 32 
IKD H7  H7  H 0 1 N N N 14.311 15.646 8.922  1.573  -3.989 -0.002 H7  IKD 33 
IKD H8  H8  H 0 1 N N N 12.121 19.612 12.708 2.380  2.270  1.245  H8  IKD 34 
IKD H9  H9  H 0 1 N N N 6.024  21.826 8.657  -3.593 3.810  1.108  H9  IKD 35 
IKD H10 H10 H 0 1 N N N 7.721  21.259 8.498  -3.874 2.346  2.080  H10 IKD 36 
IKD H11 H11 H 0 1 N N N 6.564  21.024 7.144  -2.520 2.402  0.925  H11 IKD 37 
IKD H12 H12 H 0 1 N N N 5.740  20.517 10.742 -6.548 2.223  -0.507 H12 IKD 38 
IKD H13 H13 H 0 1 N N N 6.109  18.759 10.767 -6.226 2.241  1.243  H13 IKD 39 
IKD H14 H14 H 0 1 N N N 7.442  19.954 10.619 -5.945 3.706  0.271  H14 IKD 40 
IKD H15 H15 H 0 1 N N N 12.276 14.884 7.804  -0.868 -4.418 0.072  H15 IKD 41 
IKD H16 H16 H 0 1 N N N 10.197 20.612 13.855 4.794  2.656  0.964  H16 IKD 42 
IKD H17 H17 H 0 1 N N N 7.657  22.699 12.160 6.824  0.993  -1.603 H17 IKD 43 
IKD H18 H18 H 0 1 N N N 7.193  21.071 12.761 6.737  2.350  -0.455 H18 IKD 44 
IKD H19 H19 H 0 1 N N N 8.503  21.711 10.113 4.999  -0.586 -1.801 H19 IKD 45 
IKD H20 H20 H 0 1 N N N 10.423 20.746 8.947  2.585  -0.981 -1.526 H20 IKD 46 
IKD H21 H21 H 0 1 N N N 7.736  16.303 6.188  -5.483 -2.269 -0.077 H21 IKD 47 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
IKD N6  N7  SING Y N 1  
IKD N6  C7  SING Y N 2  
IKD N7  C5  DOUB Y N 3  
IKD N1  C7  SING N N 4  
IKD N1  C8  SING N N 5  
IKD C7  C6  DOUB Y N 6  
IKD C8  C9  DOUB Y N 7  
IKD C8  N5  SING Y N 8  
IKD C5  C6  SING Y N 9  
IKD C5  C2  SING N N 10 
IKD C1  C2  SING N N 11 
IKD C9  C10 SING Y N 12 
IKD C4  C2  SING N N 13 
IKD N5  C11 DOUB Y N 14 
IKD C2  C3  SING N N 15 
IKD C10 N2  DOUB Y N 16 
IKD C11 N2  SING Y N 17 
IKD C11 N3  SING N N 18 
IKD N3  C12 SING N N 19 
IKD C19 C18 DOUB Y N 20 
IKD C19 C12 SING Y N 21 
IKD C18 C15 SING Y N 22 
IKD C12 C13 DOUB Y N 23 
IKD C15 C16 SING N N 24 
IKD C15 C14 DOUB Y N 25 
IKD C13 C14 SING Y N 26 
IKD C16 C17 SING N N 27 
IKD C17 N4  TRIP N N 28 
IKD N1  H1  SING N N 29 
IKD N3  H2  SING N N 30 
IKD C4  H3  SING N N 31 
IKD C4  H4  SING N N 32 
IKD C4  H5  SING N N 33 
IKD C6  H6  SING N N 34 
IKD C10 H7  SING N N 35 
IKD C13 H8  SING N N 36 
IKD C1  H9  SING N N 37 
IKD C1  H10 SING N N 38 
IKD C1  H11 SING N N 39 
IKD C3  H12 SING N N 40 
IKD C3  H13 SING N N 41 
IKD C3  H14 SING N N 42 
IKD C9  H15 SING N N 43 
IKD C14 H16 SING N N 44 
IKD C16 H17 SING N N 45 
IKD C16 H18 SING N N 46 
IKD C18 H19 SING N N 47 
IKD C19 H20 SING N N 48 
IKD N6  H21 SING N N 49 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
IKD InChI            InChI                1.06  "InChI=1S/C19H21N7/c1-19(2,3)15-12-17(26-25-15)23-16-9-11-21-18(24-16)22-14-6-4-13(5-7-14)8-10-20/h4-7,9,11-12H,8H2,1-3H3,(H3,21,22,23,24,25,26)" 
IKD InChIKey         InChI                1.06  HXSSLURGSSMMAH-UHFFFAOYSA-N                                                                                                                       
IKD SMILES_CANONICAL CACTVS               3.385 "CC(C)(C)c1cc([nH]n1)Nc2ccnc(Nc3ccc(CC#N)cc3)n2"                                                                                                  
IKD SMILES           CACTVS               3.385 "CC(C)(C)c1cc([nH]n1)Nc2ccnc(Nc3ccc(CC#N)cc3)n2"                                                                                                  
IKD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)(C)c1cc([nH]n1)Nc2ccnc(n2)Nc3ccc(cc3)CC#N"                                                                                                  
IKD SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)(C)c1cc([nH]n1)Nc2ccnc(n2)Nc3ccc(cc3)CC#N"                                                                                                  
# 
_pdbx_chem_comp_identifier.comp_id           IKD 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "2-[4-[[4-[(3-~{tert}-butyl-1~{H}-pyrazol-5-yl)amino]pyrimidin-2-yl]amino]phenyl]ethanenitrile" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
IKD "Create component" 2023-08-01 PDBE 
IKD "Initial release"  2023-08-16 RCSB 
# 
