data_G6D
#

_chem_comp.id                                   G6D
_chem_comp.name                                 alpha-D-quinovopyranose
_chem_comp.type                                 "D-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C6 H12 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "alpha-D-quinovose; 6-deoxy-alpha-D-glucopyranose; D-quinovose; quinovose; 6-DEOXY-ALPHA-D-GLUCOSE"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    1999-08-04
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        GLW
_chem_comp.formula_weight                       164.156
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    G6D
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1B2Y
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  G6D  alpha-D-quinovose              PDB  ?  
2  G6D  6-deoxy-alpha-D-glucopyranose  PDB  ?  
3  G6D  D-quinovose                    PDB  ?  
4  G6D  quinovose                      PDB  ?  
5  G6D  6-DEOXY-ALPHA-D-GLUCOSE        PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
G6D  C1   C1    C  0  1  N  N  S  24.522   3.027  45.032  -0.845   1.417  -0.243  C1   G6D   1  
G6D  O2   O2    O  0  1  N  N  N  23.895   3.507  42.722  -2.707  -0.123  -0.142  O2   G6D   2  
G6D  C2   C2    C  0  1  N  N  R  24.413   2.502  43.591  -1.345   0.004  -0.554  C2   G6D   3  
G6D  C3   C3    C  0  1  N  N  S  23.518   1.276  43.558  -0.484  -1.012   0.203  C3   G6D   4  
G6D  O3   O3    O  0  1  N  N  N  23.460   0.747  42.243  -0.896  -2.337  -0.138  O3   G6D   5  
G6D  C4   C4    C  0  1  N  N  S  24.093   0.235  44.500   0.984  -0.814  -0.189  C4   G6D   6  
G6D  O4   O4    O  0  1  N  N  N  23.244  -0.903  44.507   1.804  -1.708   0.567  O4   G6D   7  
G6D  C5   C5    C  0  1  N  N  R  24.183   0.829  45.903   1.393   0.631   0.109  C5   G6D   8  
G6D  O5   O5    O  0  1  N  N  N  25.015   1.999  45.872   0.534   1.524  -0.603  O5   G6D   9  
G6D  C6   C6    C  0  1  N  N  N  24.728  -0.184  46.913   2.840   0.853  -0.336  C6   G6D  10  
G6D  O1   O1    O  0  1  N  Y  N  23.285   3.525  45.467  -0.995   1.678   1.154  O1   G6D  11  
G6D  H1   H1    H  0  1  N  N  N  25.251   3.851  45.021  -1.427   2.142  -0.813  H1   G6D  12  
G6D  HO2  HO2   H  0  1  N  Y  N  23.836   3.163  41.839  -3.309   0.495  -0.579  HO2  G6D  13  
G6D  H2   HC2   H  0  1  N  N  N  25.419   2.207  43.257  -1.270  -0.181  -1.626  H2   G6D  14  
G6D  H3   HC3   H  0  1  N  N  N  22.512   1.557  43.904  -0.600  -0.860   1.276  H3   G6D  15  
G6D  HO3  HO3   H  0  1  N  Y  N  22.898  -0.019  42.234  -1.819  -2.530   0.076  HO3  G6D  16  
G6D  H4   HC4   H  0  1  N  N  N  25.103  -0.040  44.161   1.107  -1.018  -1.252  H4   G6D  17  
G6D  HO4  HO4   H  0  1  N  Y  N  23.598  -1.559  45.095   2.748  -1.637   0.369  HO4  G6D  18  
G6D  H5   HC5   H  0  1  N  N  N  23.169   1.113  46.219   1.308   0.820   1.179  H5   G6D  19  
G6D  H61  HC61  H  0  1  N  N  N  24.778   0.281  47.909   2.924   0.664  -1.406  H61  G6D  20  
G6D  H62  HC62  H  0  1  N  N  N  24.063  -1.059  46.950   3.131   1.881  -0.124  H62  G6D  21  
G6D  H63  HC63  H  0  1  N  N  N  25.735  -0.502  46.606   3.495   0.170   0.206  H63  G6D  22  
G6D  HO1  HO1   H  0  1  N  Y  N  23.368   3.845  46.358  -0.698   2.558   1.424  HO1  G6D  23  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
G6D  C1  C2   SING  N  N   1  
G6D  C1  O5   SING  N  N   2  
G6D  C1  O1   SING  N  N   3  
G6D  C1  H1   SING  N  N   4  
G6D  O2  C2   SING  N  N   5  
G6D  O2  HO2  SING  N  N   6  
G6D  C2  C3   SING  N  N   7  
G6D  C2  H2   SING  N  N   8  
G6D  C3  O3   SING  N  N   9  
G6D  C3  C4   SING  N  N  10  
G6D  C3  H3   SING  N  N  11  
G6D  O3  HO3  SING  N  N  12  
G6D  C4  O4   SING  N  N  13  
G6D  C4  C5   SING  N  N  14  
G6D  C4  H4   SING  N  N  15  
G6D  O4  HO4  SING  N  N  16  
G6D  C5  O5   SING  N  N  17  
G6D  C5  C6   SING  N  N  18  
G6D  C5  H5   SING  N  N  19  
G6D  C6  H61  SING  N  N  20  
G6D  C6  H62  SING  N  N  21  
G6D  C6  H63  SING  N  N  22  
G6D  O1  HO1  SING  N  N  23  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
G6D  SMILES            ACDLabs               12.01  "C1(C(O)C(O)C(O)C(O1)C)O"  
G6D  InChI             InChI                 1.03   "InChI=1S/C6H12O5/c1-2-3(7)4(8)5(9)6(10)11-2/h2-10H,1H3/t2-,3-,4+,5-,6+/m1/s1"  
G6D  InChIKey          InChI                 1.03   SHZGCJCMOBCMKK-DVKNGEFBSA-N  
G6D  SMILES_CANONICAL  CACTVS                3.385  "C[C@H]1O[C@H](O)[C@H](O)[C@@H](O)[C@@H]1O"  
G6D  SMILES            CACTVS                3.385  "C[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O"  
G6D  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "C[C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O)O)O)O"  
G6D  SMILES            "OpenEye OEToolkits"  1.7.6  "CC1C(C(C(C(O1)O)O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
G6D  "SYSTEMATIC NAME"                      ACDLabs               12.01  6-deoxy-alpha-D-glucopyranose  
G6D  "SYSTEMATIC NAME"                      "OpenEye OEToolkits"  1.7.6  "(2S,3R,4S,5S,6R)-6-methyloxane-2,3,4,5-tetrol"  
G6D  "CONDENSED IUPAC CARBOHYDRATE SYMBOL"  GMML                  1.0    DQuipa  
G6D  "COMMON NAME"                          GMML                  1.0    a-D-quinovopyranose  
G6D  "IUPAC CARBOHYDRATE SYMBOL"            PDB-CARE              1.0    a-D-6-deoxy-Glcp  
G6D  "SNFG CARBOHYDRATE SYMBOL"             GMML                  1.0    Qui  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
G6D  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
G6D  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
G6D  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
G6D  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
G6D  "Create component"          1999-08-04  PDBJ  
G6D  "Modify descriptor"         2011-06-04  RCSB  
G6D  "Modify atom id"            2017-10-13  RCSB  
G6D  "Other modification"        2019-08-12  RCSB  
G6D  "Other modification"        2019-12-19  RCSB  
G6D  "Other modification"        2020-07-03  RCSB  
G6D  "Modify name"               2020-07-17  RCSB  
G6D  "Modify synonyms"           2020-07-17  RCSB  
G6D  "Modify atom id"            2020-07-17  RCSB  
G6D  "Modify component atom id"  2020-07-17  RCSB  
##
