data_0TD
# 
_chem_comp.id                                    0TD 
_chem_comp.name                                  "(3S)-3-(methylsulfanyl)-L-aspartic acid" 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C5 H9 N O4 S" 
_chem_comp.mon_nstd_parent_comp_id               ASP 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-02-22 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        179.194 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     0TD 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4DR1 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
0TD N   N   N 0 1 N N N Y Y N 177.311 88.764 1.826 -0.812 2.218  -0.352 N   0TD 1  
0TD CA  CA  C 0 1 N N R Y N N 178.686 88.976 1.474 -0.816 0.756  -0.485 CA  0TD 2  
0TD C   C   C 0 1 N N N Y N Y 179.324 87.575 1.240 -2.093 0.202  0.093  C   0TD 3  
0TD O   O   O 0 1 N N N Y N Y 180.544 87.491 0.998 -2.739 0.862  0.873  O   0TD 4  
0TD CSB CSB C 0 1 N N N N N N 180.168 91.704 1.218 3.174  0.254  0.771  CSB 0TD 5  
0TD SB  SB  S 0 1 N N N N N N 180.859 90.495 2.331 1.908  0.948  -0.327 SB  0TD 6  
0TD CB  CB  C 0 1 N N S N N N 179.214 89.812 2.658 0.380  0.172  0.269  CB  0TD 7  
0TD CG  CG  C 0 1 N N N N N N 179.275 89.016 3.973 0.447  -1.315 0.032  CG  0TD 8  
0TD OD2 OD2 O 0 1 N N N N N N 180.047 89.449 4.870 0.384  -1.798 -1.219 OD2 0TD 9  
0TD OD1 OD1 O 0 1 N N N N N N 178.534 88.015 4.071 0.557  -2.072 0.967  OD1 0TD 10 
0TD H   H1  H 0 1 N N N Y Y N 176.867 89.646 1.984 -0.875 2.494  0.617  H1  0TD 11 
0TD H2  H2  H 0 1 N Y N Y Y N 176.846 88.286 1.081 0.004  2.619  -0.790 H2  0TD 12 
0TD HA  H4  H 0 1 N N N Y N N 178.765 89.566 0.549 -0.748 0.486  -1.539 H4  0TD 13 
0TD H6  H6  H 0 1 N N N N N N 178.552 90.679 2.800 0.267  0.365  1.336  H6  0TD 14 
0TD H7  H7  H 0 1 N N N N N N 179.981 88.896 5.639 0.431  -2.759 -1.321 H7  0TD 15 
0TD OXT OXT O 0 1 N Y N Y N Y ?       ?      ?     -2.513 -1.024 -0.258 OXT 0TD 16 
0TD H3  H3  H 0 1 N N N N N N 180.974 92.333 0.812 2.944  0.518  1.804  H3  0TD 17 
0TD H5  H5  H 0 1 N N N N N N 179.653 91.190 0.393 3.188  -0.831 0.669  H5  0TD 18 
0TD H8  H8  H 0 1 N N N N N N 179.450 92.335 1.762 4.150  0.657  0.501  H8  0TD 19 
0TD HXT H9  H 0 1 N Y N Y N Y ?       ?      ?     -3.337 -1.336 0.139  H9  0TD 20 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
0TD O   C   DOUB N N 1  
0TD CSB SB  SING N N 2  
0TD C   CA  SING N N 3  
0TD CA  N   SING N N 4  
0TD CA  CB  SING N N 5  
0TD SB  CB  SING N N 6  
0TD CB  CG  SING N N 7  
0TD CG  OD1 DOUB N N 8  
0TD CG  OD2 SING N N 9  
0TD N   H   SING N N 10 
0TD N   H2  SING N N 11 
0TD CA  HA  SING N N 12 
0TD CB  H6  SING N N 13 
0TD OD2 H7  SING N N 14 
0TD C   OXT SING N N 15 
0TD CSB H3  SING N N 16 
0TD CSB H5  SING N N 17 
0TD CSB H8  SING N N 18 
0TD OXT HXT SING N N 19 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
0TD SMILES           ACDLabs              12.01 "O=C(O)C(N)C(SC)C(=O)O"                                                                 
0TD InChI            InChI                1.03  "InChI=1S/C5H9NO4S/c1-11-3(5(9)10)2(6)4(7)8/h2-3H,6H2,1H3,(H,7,8)(H,9,10)/t2-,3-/m0/s1" 
0TD InChIKey         InChI                1.03  AOSGDBLMPHPJQU-HRFVKAFMSA-N                                                             
0TD SMILES_CANONICAL CACTVS               3.370 "CS[C@@H]([C@H](N)C(O)=O)C(O)=O"                                                        
0TD SMILES           CACTVS               3.370 "CS[CH]([CH](N)C(O)=O)C(O)=O"                                                           
0TD SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CS[C@@H]([C@@H](C(=O)O)N)C(=O)O"                                                       
0TD SMILES           "OpenEye OEToolkits" 1.7.6 "CSC(C(C(=O)O)N)C(=O)O"                                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
0TD "SYSTEMATIC NAME" ACDLabs              12.01 "(3S)-3-(methylsulfanyl)-L-aspartic acid"            
0TD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2R,3S)-2-azanyl-3-methylsulfanyl-butanedioic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
0TD "Create component" 2012-02-22 RCSB 
0TD "Initial release"  2012-11-09 RCSB 
0TD "Modify backbone"  2023-11-03 PDBE 
0TD "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            0TD 
_pdbx_chem_comp_pcm.modified_residue_id                ASP 
_pdbx_chem_comp_pcm.type                               Methylsulfanylation 
_pdbx_chem_comp_pcm.category                           "Named protein modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
