data_Y4C
# 
_chem_comp.id                                    Y4C 
_chem_comp.name                                  "N~1~-(4-butylphenyl)-N~2~-{2-[4-(4-methylbenzene-1-sulfonyl)piperazin-1-yl]ethyl}ethanediamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H34 N4 O4 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-11 
_chem_comp.pdbx_modified_date                    2024-12-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        486.627 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Y4C 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7G4X 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Y4C C10 C1  C 0 1 N N N N N N 16.680 12.950 -45.507 4.328   1.710  0.932  C10 Y4C 1  
Y4C C11 C2  C 0 1 N N N N N N 14.255 13.385 -45.635 4.889   1.663  -1.529 C11 Y4C 2  
Y4C O12 O1  O 0 1 N N N N N N 12.744 7.812  -46.817 -3.743  0.378  -0.914 O12 Y4C 3  
Y4C C15 C3  C 0 1 N N N N N N 14.309 13.092 -47.175 3.529   1.001  -1.775 C15 Y4C 4  
Y4C C16 C4  C 0 1 N N N N N N 16.717 12.606 -47.037 2.990   1.047  0.589  C16 Y4C 5  
Y4C C19 C5  C 0 1 Y N N N N N 13.387 5.522  -45.199 -5.896  1.156  0.440  C19 Y4C 6  
Y4C C23 C6  C 0 1 Y N N N N N 11.577 3.951  -43.738 -8.430  0.134  0.005  C23 Y4C 7  
Y4C C24 C7  C 0 1 Y N N N N N 13.487 4.113  -45.250 -6.788  1.035  1.497  C24 Y4C 8  
Y4C C25 C8  C 0 1 Y N N N N N 12.394 6.143  -44.395 -6.278  0.762  -0.836 C25 Y4C 9  
Y4C C26 C9  C 0 1 N N N N N N 15.560 10.088 -48.995 0.217   1.679  -0.131 C26 Y4C 10 
Y4C C27 C10 C 0 1 Y N N N N N 12.579 3.335  -44.517 -8.053  0.525  1.277  C27 Y4C 11 
Y4C C28 C11 C 0 1 Y N N N N N 11.498 5.351  -43.672 -7.544  0.252  -1.049 C28 Y4C 12 
Y4C N2  N1  N 0 1 N N N N N N 15.576 13.884 -45.168 5.290   1.403  -0.138 N2  Y4C 13 
Y4C C3  C12 C 0 1 N N N N N N 13.888 7.391  -46.779 -3.567  1.200  -0.039 C3  Y4C 14 
Y4C C4  C13 C 0 1 N N N N N N 14.980 8.093  -47.600 -2.187  1.683  0.266  C4  Y4C 15 
Y4C N6  N2  N 0 1 N N N N N N 14.289 6.293  -46.015 -4.618  1.677  0.658  N6  Y4C 16 
Y4C N9  N3  N 0 1 N N N N N N 15.373 12.056 -47.439 2.574   1.460  -0.758 N9  Y4C 17 
Y4C O13 O2  O 0 1 N N N N N N 16.095 7.591  -47.732 -2.012  2.504  1.142  O13 Y4C 18 
Y4C N14 N4  N 0 1 N N N N N N 14.600 9.304  -48.176 -1.137  1.206  -0.430 N14 Y4C 19 
Y4C C29 C14 C 0 1 N N N N N N 15.349 11.632 -48.887 1.217   0.985  -1.058 C29 Y4C 20 
Y4C C30 C15 C 0 1 N N N N N N 10.543 3.139  -43.018 -9.811  -0.422 -0.231 C30 Y4C 21 
Y4C C32 C16 C 0 1 N N N N N N 11.213 2.099  -42.133 -9.787  -1.941 -0.047 C32 Y4C 22 
Y4C C33 C17 C 0 1 N N N N N N 10.272 1.682  -41.017 -11.188 -2.506 -0.287 C33 Y4C 23 
Y4C C34 C18 C 0 1 N N N N N N 11.030 1.719  -39.698 -11.165 -4.024 -0.103 C34 Y4C 24 
Y4C H36 H1  H 0 1 N N N N N N 17.636 13.415 -45.225 4.194   2.789  1.005  H36 Y4C 25 
Y4C H37 H2  H 0 1 N N N N N N 16.543 12.019 -44.938 4.696   1.322  1.882  H37 Y4C 26 
Y4C H39 H3  H 0 1 N N N N N N 14.003 12.460 -45.096 5.630   1.240  -2.208 H39 Y4C 27 
Y4C H38 H4  H 0 1 N N N N N N 13.486 14.146 -45.435 4.810   2.737  -1.696 H38 Y4C 28 
Y4C H41 H5  H 0 1 N N N N N N 14.552 14.017 -47.718 3.165   1.276  -2.765 H41 Y4C 29 
Y4C H42 H6  H 0 1 N N N N N N 13.333 12.713 -47.513 3.635   -0.082 -1.713 H42 Y4C 30 
Y4C H44 H7  H 0 1 N N N N N N 17.497 11.855 -47.229 3.103   -0.037 0.618  H44 Y4C 31 
Y4C H43 H8  H 0 1 N N N N N N 16.933 13.516 -47.616 2.236   1.354  1.314  H43 Y4C 32 
Y4C H49 H9  H 0 1 N N N N N N 14.254 3.641  -45.846 -6.494  1.340  2.491  H49 Y4C 33 
Y4C H50 H10 H 0 1 N N N N N N 12.332 7.220  -44.343 -5.587  0.854  -1.661 H50 Y4C 34 
Y4C H52 H11 H 0 1 N N N N N N 16.580 9.851  -48.659 0.267   2.757  -0.284 H52 Y4C 35 
Y4C H51 H12 H 0 1 N N N N N N 15.443 9.793  -50.048 0.461   1.448  0.906  H51 Y4C 36 
Y4C H53 H13 H 0 1 N N N N N N 12.647 2.258  -44.549 -8.747  0.432  2.099  H53 Y4C 37 
Y4C H54 H14 H 0 1 N N N N N N 10.741 5.818  -43.059 -7.842  -0.054 -2.041 H54 Y4C 38 
Y4C H35 H17 H 0 1 N N N N N N 15.253 6.028  -46.036 -4.486  2.382  1.311  H35 Y4C 39 
Y4C H40 H19 H 0 1 N N N N N N 13.672 9.649  -48.037 -1.277  0.549  -1.130 H40 Y4C 40 
Y4C H56 H20 H 0 1 N N N N N N 14.377 11.899 -49.329 1.167   -0.093 -0.905 H56 Y4C 41 
Y4C H55 H21 H 0 1 N N N N N N 16.153 12.149 -49.431 0.972   1.217  -2.095 H55 Y4C 42 
Y4C H58 H22 H 0 1 N N N N N N 9.928  3.805  -42.394 -10.507 0.019  0.482  H58 Y4C 43 
Y4C H57 H23 H 0 1 N N N N N N 9.903  2.631  -43.754 -10.130 -0.184 -1.246 H57 Y4C 44 
Y4C H62 H24 H 0 1 N N N N N N 11.473 1.218  -42.739 -9.090  -2.382 -0.760 H62 Y4C 45 
Y4C H63 H25 H 0 1 N N N N N N 12.128 2.527  -41.697 -9.468  -2.179 0.968  H63 Y4C 46 
Y4C H65 H26 H 0 1 N N N N N N 9.420  2.376  -40.973 -11.885 -2.064 0.426  H65 Y4C 47 
Y4C H64 H27 H 0 1 N N N N N N 9.905  0.662  -41.204 -11.507 -2.268 -1.302 H64 Y4C 48 
Y4C H68 H28 H 0 1 N N N N N N 10.359 1.419  -38.880 -12.163 -4.427 -0.274 H68 Y4C 49 
Y4C H66 H29 H 0 1 N N N N N N 11.883 1.026  -39.746 -10.468 -4.466 -0.816 H66 Y4C 50 
Y4C H67 H30 H 0 1 N N N N N N 11.397 2.740  -39.515 -10.846 -4.262 0.912  H67 Y4C 51 
Y4C S1  S1  S 0 1 N N N N N N ?      ?      ?       6.784   0.782  0.215  S1  Y4C 52 
Y4C C2  C19 C 0 1 Y N N N N N ?      ?      ?       6.633   -0.973 0.215  C2  Y4C 53 
Y4C C5  C20 C 0 1 Y N N N N N ?      ?      ?       6.839   -1.685 -0.953 C5  Y4C 54 
Y4C C6  C21 C 0 1 Y N N N N N ?      ?      ?       6.721   -3.062 -0.953 C6  Y4C 55 
Y4C C7  C22 C 0 1 Y N N N N N ?      ?      ?       6.396   -3.728 0.214  C7  Y4C 56 
Y4C C8  C23 C 0 1 Y N N N N N ?      ?      ?       6.190   -3.017 1.381  C8  Y4C 57 
Y4C C9  C24 C 0 1 Y N N N N N ?      ?      ?       6.313   -1.640 1.383  C9  Y4C 58 
Y4C C12 C25 C 0 1 N N N N N N ?      ?      ?       6.265   -5.229 0.213  C12 Y4C 59 
Y4C O2  O3  O 0 1 N N N N N N ?      ?      ?       7.625   1.113  -0.882 O2  Y4C 60 
Y4C O1  O4  O 0 1 N N N N N N ?      ?      ?       7.070   1.160  1.555  O1  Y4C 61 
Y4C H1  H31 H 0 1 N N N N N N ?      ?      ?       7.093   -1.164 -1.864 H1  Y4C 62 
Y4C H2  H32 H 0 1 N N N N N N ?      ?      ?       6.881   -3.617 -1.865 H2  Y4C 63 
Y4C H3  H33 H 0 1 N N N N N N ?      ?      ?       5.936   -3.537 2.293  H3  Y4C 64 
Y4C H4  H34 H 0 1 N N N N N N ?      ?      ?       6.152   -1.084 2.295  H4  Y4C 65 
Y4C H5  H35 H 0 1 N N N N N N ?      ?      ?       7.232   -5.678 0.442  H5  Y4C 66 
Y4C H6  H36 H 0 1 N N N N N N ?      ?      ?       5.538   -5.531 0.967  H6  Y4C 67 
Y4C H7  H37 H 0 1 N N N N N N ?      ?      ?       5.932   -5.564 -0.769 H7  Y4C 68 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Y4C N2  C10 SING N N 1  
Y4C N2  C11 SING N N 2  
Y4C C3  C4  SING N N 3  
Y4C C3  N6  SING N N 4  
Y4C C3  O12 DOUB N N 5  
Y4C C4  N14 SING N N 6  
Y4C C4  O13 DOUB N N 7  
Y4C N6  C19 SING N N 8  
Y4C N9  C15 SING N N 9  
Y4C N9  C29 SING N N 10 
Y4C N9  C16 SING N N 11 
Y4C C10 C16 SING N N 12 
Y4C C11 C15 SING N N 13 
Y4C N14 C26 SING N N 14 
Y4C C19 C24 DOUB Y N 15 
Y4C C19 C25 SING Y N 16 
Y4C C23 C28 SING Y N 17 
Y4C C23 C30 SING N N 18 
Y4C C23 C27 DOUB Y N 19 
Y4C C24 C27 SING Y N 20 
Y4C C25 C28 DOUB Y N 21 
Y4C C26 C29 SING N N 22 
Y4C C30 C32 SING N N 23 
Y4C C32 C33 SING N N 24 
Y4C C33 C34 SING N N 25 
Y4C C10 H36 SING N N 26 
Y4C C10 H37 SING N N 27 
Y4C C11 H39 SING N N 28 
Y4C C11 H38 SING N N 29 
Y4C C15 H41 SING N N 30 
Y4C C15 H42 SING N N 31 
Y4C C16 H44 SING N N 32 
Y4C C16 H43 SING N N 33 
Y4C C24 H49 SING N N 34 
Y4C C25 H50 SING N N 35 
Y4C C26 H52 SING N N 36 
Y4C C26 H51 SING N N 37 
Y4C C27 H53 SING N N 38 
Y4C C28 H54 SING N N 39 
Y4C N6  H35 SING N N 40 
Y4C N14 H40 SING N N 41 
Y4C C29 H56 SING N N 42 
Y4C C29 H55 SING N N 43 
Y4C C30 H58 SING N N 44 
Y4C C30 H57 SING N N 45 
Y4C C32 H62 SING N N 46 
Y4C C32 H63 SING N N 47 
Y4C C33 H65 SING N N 48 
Y4C C33 H64 SING N N 49 
Y4C C34 H68 SING N N 50 
Y4C C34 H66 SING N N 51 
Y4C C34 H67 SING N N 52 
Y4C N2  S1  SING N N 53 
Y4C S1  C2  SING N N 54 
Y4C C2  C5  SING Y N 55 
Y4C C5  C6  DOUB Y N 56 
Y4C C6  C7  SING Y N 57 
Y4C C7  C8  DOUB Y N 58 
Y4C C8  C9  SING Y N 59 
Y4C C9  C2  DOUB Y N 60 
Y4C C7  C12 SING N N 61 
Y4C S1  O2  DOUB N N 62 
Y4C S1  O1  DOUB N N 63 
Y4C C5  H1  SING N N 64 
Y4C C6  H2  SING N N 65 
Y4C C8  H3  SING N N 66 
Y4C C9  H4  SING N N 67 
Y4C C12 H5  SING N N 68 
Y4C C12 H6  SING N N 69 
Y4C C12 H7  SING N N 70 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Y4C SMILES           ACDLabs              12.01 "O=S(=O)(c1ccc(C)cc1)N1CCN(CCNC(=O)C(=O)Nc2ccc(CCCC)cc2)CC1"                                                                                                              
Y4C InChI            InChI                1.06  "InChI=1S/C25H34N4O4S/c1-3-4-5-21-8-10-22(11-9-21)27-25(31)24(30)26-14-15-28-16-18-29(19-17-28)34(32,33)23-12-6-20(2)7-13-23/h6-13H,3-5,14-19H2,1-2H3,(H,26,30)(H,27,31)" 
Y4C InChIKey         InChI                1.06  VCWKUFHIPVADCP-UHFFFAOYSA-N                                                                                                                                               
Y4C SMILES_CANONICAL CACTVS               3.385 "CCCCc1ccc(NC(=O)C(=O)NCCN2CCN(CC2)[S](=O)(=O)c3ccc(C)cc3)cc1"                                                                                                            
Y4C SMILES           CACTVS               3.385 "CCCCc1ccc(NC(=O)C(=O)NCCN2CCN(CC2)[S](=O)(=O)c3ccc(C)cc3)cc1"                                                                                                            
Y4C SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCc1ccc(cc1)NC(=O)C(=O)NCCN2CCN(CC2)S(=O)(=O)c3ccc(cc3)C"                                                                                                              
Y4C SMILES           "OpenEye OEToolkits" 2.0.7 "CCCCc1ccc(cc1)NC(=O)C(=O)NCCN2CCN(CC2)S(=O)(=O)c3ccc(cc3)C"                                                                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
Y4C "SYSTEMATIC NAME" ACDLabs              12.01 "N~1~-(4-butylphenyl)-N~2~-{2-[4-(4-methylbenzene-1-sulfonyl)piperazin-1-yl]ethyl}ethanediamide" 
Y4C "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}'-(4-butylphenyl)-~{N}-[2-[4-(4-methylphenyl)sulfonylpiperazin-1-yl]ethyl]ethanediamide"    
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Y4C "Create component" 2023-06-11 RCSB 
Y4C "Initial release"  2024-12-18 RCSB 
# 
