data_XUC
# 
_chem_comp.id                                    XUC 
_chem_comp.name                                  "2-[4-[(2~{R})-2-[(4-chlorophenyl)methyl]pyrrolidin-1-yl]piperidin-1-yl]pyridine" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H26 Cl N3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-11-13 
_chem_comp.pdbx_modified_date                    2024-03-08 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        355.904 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     XUC 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8R42 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
XUC C18  C1  C  0 1 N N N -27.792 -23.076 37.935 1.994  -0.044 1.281  C18  XUC 1  N N N 
XUC C16  C2  C  0 1 N N N -28.194 -23.832 35.619 1.607  0.784  -0.964 C16  XUC 2  N N N 
XUC C15  C3  C  0 1 N N N -29.378 -24.722 36.001 0.100  0.866  -0.713 C15  XUC 3  N N N 
XUC C14  C4  C  0 1 N N N -30.229 -24.002 37.096 -0.301 -0.201 0.310  C14  XUC 4  N N N 
XUC C12  C5  C  0 1 N N N -31.648 -24.264 38.794 1.229  -2.094 0.366  C12  XUC 5  N N N 
XUC C11  C6  C  0 1 N N N -33.019 -24.978 38.812 1.114  -3.618 0.147  C11  XUC 6  N N N 
XUC C10  C7  C  0 1 N N N -33.110 -25.525 37.492 -0.398 -3.889 0.003  C10  XUC 7  N N N 
XUC C02  C8  C  0 1 Y N N -33.259 -30.388 35.272 -4.354 1.253  -0.024 C02  XUC 8  N N N 
XUC C03  C9  C  0 1 Y N N -33.105 -30.471 36.774 -3.459 1.179  -1.077 C03  XUC 9  N N N 
XUC C04  C10 C  0 1 Y N N -32.480 -29.467 37.445 -2.783 0.000  -1.327 C04  XUC 10 N N N 
XUC C05  C11 C  0 1 Y N N -31.937 -28.268 36.698 -3.001 -1.105 -0.527 C05  XUC 11 N N N 
XUC C06  C12 C  0 1 Y N N -32.066 -28.190 35.350 -3.895 -1.033 0.525  C06  XUC 12 N N N 
XUC C07  C13 C  0 1 Y N N -32.775 -29.319 34.599 -4.572 0.146  0.776  C07  XUC 13 N N N 
XUC C08  C14 C  0 1 N N N -31.223 -27.161 37.502 -2.264 -2.391 -0.801 C08  XUC 14 N N N 
XUC C09  C15 C  0 1 N N R -31.688 -25.705 37.103 -1.069 -2.506 0.148  C09  XUC 15 N N N 
XUC C19  C16 C  0 1 N N N -29.325 -23.133 38.032 0.498  0.014  1.598  C19  XUC 16 N N N 
XUC C20  C17 C  0 1 Y N N -26.022 -22.850 36.250 3.699  1.059  0.085  C20  XUC 17 N N N 
XUC C21  C18 C  0 1 Y N N -25.569 -22.544 34.904 4.556  1.261  1.162  C21  XUC 18 N N N 
XUC C22  C19 C  0 1 Y N N -24.327 -22.263 34.621 5.919  1.322  0.936  C22  XUC 19 N N N 
XUC C23  C20 C  0 1 Y N N -23.444 -22.237 35.464 6.381  1.177  -0.366 C23  XUC 20 N N N 
XUC C24  C21 C  0 1 Y N N -23.638 -22.476 36.730 5.474  0.978  -1.388 C24  XUC 21 N N N 
XUC N13  N1  N  0 1 N N N -30.921 -24.858 37.825 -0.011 -1.535 -0.232 N13  XUC 22 N N N 
XUC N17  N2  N  0 1 N N N -27.378 -23.155 36.577 2.327  0.996  0.298  N17  XUC 23 N N N 
XUC N25  N3  N  0 1 Y N N -24.899 -22.799 37.265 4.179  0.930  -1.142 N25  XUC 24 N N N 
XUC CL01 CL1 CL 0 0 N N N -34.075 -31.683 34.433 -5.198 2.736  0.295  CL01 XUC 25 N N N 
XUC H1   H1  H  0 1 N N N -27.362 -23.920 38.495 2.566  0.123  2.193  H1   XUC 26 N N N 
XUC H2   H2  H  0 1 N N N -27.436 -22.129 38.368 2.241  -1.023 0.871  H2   XUC 27 N N N 
XUC H3   H3  H  0 1 N N N -27.511 -24.471 35.040 1.856  -0.199 -1.363 H3   XUC 28 N N N 
XUC H4   H4  H  0 1 N N N -28.605 -23.048 34.966 1.898  1.551  -1.681 H4   XUC 29 N N N 
XUC H5   H5  H  0 1 N N N -30.001 -24.907 35.113 -0.152 1.853  -0.327 H5   XUC 30 N N N 
XUC H6   H6  H  0 1 N N N -29.007 -25.680 36.394 -0.435 0.693  -1.647 H6   XUC 31 N N N 
XUC H7   H7  H  0 1 N N N -30.907 -23.312 36.574 -1.367 -0.119 0.523  H7   XUC 32 N N N 
XUC H8   H8  H  0 1 N N N -31.148 -24.376 39.767 1.274  -1.865 1.431  H8   XUC 33 N N N 
XUC H9   H9  H  0 1 N N N -31.779 -23.195 38.570 2.109  -1.702 -0.144 H9   XUC 34 N N N 
XUC H10  H10 H  0 1 N N N -33.835 -24.265 39.002 1.639  -3.910 -0.762 H10  XUC 35 N N N 
XUC H11  H11 H  0 1 N N N -33.042 -25.773 39.572 1.517  -4.155 1.005  H11  XUC 36 N N N 
XUC H12  H12 H  0 1 N N N -33.621 -24.829 36.810 -0.615 -4.314 -0.976 H12  XUC 37 N N N 
XUC H13  H13 H  0 1 N N N -33.642 -26.488 37.499 -0.738 -4.561 0.791  H13  XUC 38 N N N 
XUC H14  H14 H  0 1 N N N -33.490 -31.325 37.312 -3.289 2.043  -1.702 H14  XUC 39 N N N 
XUC H15  H15 H  0 1 N N N -32.370 -29.526 38.518 -2.084 -0.057 -2.149 H15  XUC 40 N N N 
XUC H16  H16 H  0 1 N N N -31.672 -27.340 34.812 -4.065 -1.897 1.150  H16  XUC 41 N N N 
XUC H17  H17 H  0 1 N N N -32.890 -29.262 33.527 -5.270 0.203  1.598  H17  XUC 42 N N N 
XUC H18  H18 H  0 1 N N N -31.433 -27.315 38.571 -2.935 -3.235 -0.644 H18  XUC 43 N N N 
XUC H19  H19 H  0 1 N N N -30.140 -27.243 37.325 -1.911 -2.395 -1.832 H19  XUC 44 N N N 
XUC H20  H20 H  0 1 N N N -31.564 -25.569 36.018 -1.385 -2.342 1.178  H20  XUC 45 N N N 
XUC H21  H21 H  0 1 N N N -29.671 -22.097 37.902 0.248  -0.768 2.316  H21  XUC 46 N N N 
XUC H22  H22 H  0 1 N N N -29.547 -23.468 39.056 0.252  0.988  2.021  H22  XUC 47 N N N 
XUC H23  H23 H  0 1 N N N -26.293 -22.549 34.102 4.162  1.370  2.162  H23  XUC 48 N N N 
XUC H24  H24 H  0 1 N N N -24.068 -22.044 33.596 6.608  1.479  1.752  H24  XUC 49 N N N 
XUC H25  H25 H  0 1 N N N -22.441 -22.001 35.140 7.439  1.220  -0.577 H25  XUC 50 N N N 
XUC H26  H26 H  0 1 N N N -22.792 -22.424 37.400 5.830  0.866  -2.401 H26  XUC 51 N N N 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
XUC CL01 C02 SING N N 1  
XUC C07  C02 DOUB Y N 2  
XUC C07  C06 SING Y N 3  
XUC C22  C21 DOUB Y N 4  
XUC C22  C23 SING Y N 5  
XUC C21  C20 SING Y N 6  
XUC C02  C03 SING Y N 7  
XUC C06  C05 DOUB Y N 8  
XUC C23  C24 DOUB Y N 9  
XUC C16  C15 SING N N 10 
XUC C16  N17 SING N N 11 
XUC C15  C14 SING N N 12 
XUC C20  N17 SING N N 13 
XUC C20  N25 DOUB Y N 14 
XUC N17  C18 SING N N 15 
XUC C05  C04 SING Y N 16 
XUC C05  C08 SING N N 17 
XUC C24  N25 SING Y N 18 
XUC C03  C04 DOUB Y N 19 
XUC C14  N13 SING N N 20 
XUC C14  C19 SING N N 21 
XUC C09  C10 SING N N 22 
XUC C09  C08 SING N N 23 
XUC C09  N13 SING N N 24 
XUC C10  C11 SING N N 25 
XUC N13  C12 SING N N 26 
XUC C18  C19 SING N N 27 
XUC C12  C11 SING N N 28 
XUC C18  H1  SING N N 29 
XUC C18  H2  SING N N 30 
XUC C16  H3  SING N N 31 
XUC C16  H4  SING N N 32 
XUC C15  H5  SING N N 33 
XUC C15  H6  SING N N 34 
XUC C14  H7  SING N N 35 
XUC C12  H8  SING N N 36 
XUC C12  H9  SING N N 37 
XUC C11  H10 SING N N 38 
XUC C11  H11 SING N N 39 
XUC C10  H12 SING N N 40 
XUC C10  H13 SING N N 41 
XUC C03  H14 SING N N 42 
XUC C04  H15 SING N N 43 
XUC C06  H16 SING N N 44 
XUC C07  H17 SING N N 45 
XUC C08  H18 SING N N 46 
XUC C08  H19 SING N N 47 
XUC C09  H20 SING N N 48 
XUC C19  H21 SING N N 49 
XUC C19  H22 SING N N 50 
XUC C21  H23 SING N N 51 
XUC C22  H24 SING N N 52 
XUC C23  H25 SING N N 53 
XUC C24  H26 SING N N 54 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
XUC InChI            InChI                1.06  "InChI=1S/C21H26ClN3/c22-18-8-6-17(7-9-18)16-20-4-3-13-25(20)19-10-14-24(15-11-19)21-5-1-2-12-23-21/h1-2,5-9,12,19-20H,3-4,10-11,13-16H2/t20-/m1/s1" 
XUC InChIKey         InChI                1.06  XCVVDQHGTQAUAD-HXUWFJFHSA-N                                                                                                                          
XUC SMILES_CANONICAL CACTVS               3.385 "Clc1ccc(C[C@H]2CCCN2C3CCN(CC3)c4ccccn4)cc1"                                                                                                         
XUC SMILES           CACTVS               3.385 "Clc1ccc(C[CH]2CCCN2C3CCN(CC3)c4ccccn4)cc1"                                                                                                          
XUC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccnc(c1)N2CCC(CC2)N3CCC[C@@H]3Cc4ccc(cc4)Cl"                                                                                                      
XUC SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccnc(c1)N2CCC(CC2)N3CCCC3Cc4ccc(cc4)Cl"                                                                                                           
# 
_pdbx_chem_comp_identifier.comp_id           XUC 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "2-[4-[(2~{R})-2-[(4-chlorophenyl)methyl]pyrrolidin-1-yl]piperidin-1-yl]pyridine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
XUC "Create component" 2023-11-13 PDBE 
XUC "Initial release"  2024-03-13 RCSB 
# 
