data_X4C
# 
_chem_comp.id                                    X4C 
_chem_comp.name                                  "8-methyl-6-[2-(5-methyl-1-phenyl-1H-benzimidazol-2-yl)ethyl]imidazo[1,5-a]pyrimidine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C23 H21 N5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-03-13 
_chem_comp.pdbx_modified_date                    2014-05-30 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        367.446 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     X4C 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3WS8 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
X4C C25 C25 C 0 1 Y N N 17.793 7.941 55.807 -0.232 4.103  0.067  C25 X4C 1  
X4C C24 C24 C 0 1 Y N N 18.940 8.562 56.258 0.140  3.148  -0.861 C24 X4C 2  
X4C C26 C26 C 0 1 Y N N 17.719 6.558 55.798 -1.158 3.795  1.048  C26 X4C 3  
X4C C17 C17 C 0 1 Y N N 23.980 6.234 55.016 -5.597 0.069  -0.395 C17 X4C 4  
X4C C15 C15 C 0 1 Y N N 22.629 6.355 55.274 -4.384 0.710  -0.260 C15 X4C 5  
X4C C23 C23 C 0 1 Y N N 20.002 7.797 56.693 -0.417 1.884  -0.815 C23 X4C 6  
X4C C27 C27 C 0 1 Y N N 18.789 5.784 56.212 -1.714 2.532  1.102  C27 X4C 7  
X4C C12 C12 C 0 1 Y N N 24.469 4.981 57.014 -4.573 -2.051 0.032  C12 X4C 8  
X4C C16 C16 C 0 1 Y N N 24.867 5.574 55.843 -5.685 -1.309 -0.248 C16 X4C 9  
X4C C8  C8  C 0 1 Y N N 23.127 5.090 57.295 -3.333 -1.423 0.173  C8  X4C 10 
X4C C10 C10 C 0 1 Y N N 22.253 5.748 56.453 -3.244 -0.029 0.024  C10 X4C 11 
X4C C18 C18 C 0 1 Y N N 19.924 6.418 56.660 -1.351 1.574  0.165  C18 X4C 12 
X4C C9  C9  C 0 1 Y N N 18.529 3.265 63.046 4.392  -2.150 0.124  C9  X4C 13 
X4C C7  C7  C 0 1 Y N N 17.688 2.714 62.107 4.570  -0.788 0.000  C7  X4C 14 
X4C C1  C1  C 0 1 Y N N 21.205 4.963 58.216 -1.250 -0.872 0.469  C1  X4C 15 
X4C C2  C2  C 0 1 Y N N 19.580 3.370 61.187 2.452  -1.297 -0.312 C2  X4C 16 
X4C C21 C21 C 0 1 Y N N 16.658 1.780 59.705 4.279  1.882  -0.363 C21 X4C 17 
X4C C14 C14 C 0 1 Y N N 17.878 2.324 59.728 3.186  1.090  -0.462 C14 X4C 18 
X4C C22 C22 C 0 1 Y N N 15.983 1.732 61.027 5.529  1.308  -0.071 C22 X4C 19 
X4C C20 C20 C 0 1 N N N 26.295 5.508 55.458 -7.020 -1.992 -0.398 C20 X4C 20 
X4C C28 C28 C 0 1 N N N 18.335 3.452 64.487 5.466  -3.163 0.430  C28 X4C 21 
X4C C11 C11 C 0 1 N N N 20.114 4.655 59.160 0.228  -0.983 0.739  C11 X4C 22 
X4C C13 C13 C 0 1 N N N 20.582 3.616 60.158 0.974  -1.187 -0.582 C13 X4C 23 
X4C N4  N4  N 0 1 Y N N 22.463 4.612 58.374 -2.081 -1.873 0.443  N4  X4C 24 
X4C N3  N3  N 0 1 Y N N 19.699 3.674 62.461 3.098  -2.409 -0.069 N3  X4C 25 
X4C N19 N19 N 0 1 Y N N 16.453 2.165 62.156 5.642  0.013  0.097  N19 X4C 26 
X4C N5  N5  N 0 1 Y N N 21.026 5.655 57.052 -1.913 0.292  0.217  N5  X4C 27 
X4C N6  N6  N 0 1 Y N N 18.373 2.780 60.923 3.325  -0.260 -0.280 N6  X4C 28 
X4C H1  H1  H 0 1 N N N 16.957 8.531 55.463 0.204  5.090  0.029  H1  X4C 29 
X4C H2  H2  H 0 1 N N N 19.006 9.640 56.270 0.866  3.390  -1.623 H2  X4C 30 
X4C H3  H3  H 0 1 N N N 16.812 6.076 55.463 -1.446 4.543  1.771  H3  X4C 31 
X4C H4  H4  H 0 1 N N N 24.366 6.683 54.113 -6.486 0.642  -0.612 H4  X4C 32 
X4C H5  H5  H 0 1 N N N 21.940 6.871 54.621 -4.322 1.782  -0.375 H5  X4C 33 
X4C H6  H6  H 0 1 N N N 20.897 8.277 57.060 -0.126 1.139  -1.540 H6  X4C 34 
X4C H7  H7  H 0 1 N N N 18.734 4.706 56.184 -2.436 2.292  1.868  H7  X4C 35 
X4C H8  H8  H 0 1 N N N 25.158 4.467 57.667 -4.652 -3.123 0.144  H8  X4C 36 
X4C H9  H9  H 0 1 N N N 16.201 1.406 58.801 4.191  2.949  -0.503 H9  X4C 37 
X4C H10 H10 H 0 1 N N N 18.463 2.403 58.824 2.220  1.516  -0.686 H10 X4C 38 
X4C H11 H11 H 0 1 N N N 14.998 1.290 61.051 6.402  1.937  0.008  H11 X4C 39 
X4C H12 H12 H 0 1 N N N 26.828 6.376 55.873 -7.168 -2.274 -1.441 H12 X4C 40 
X4C H13 H13 H 0 1 N N N 26.739 4.582 55.853 -7.044 -2.884 0.227  H13 X4C 41 
X4C H14 H14 H 0 1 N N N 26.380 5.516 54.361 -7.813 -1.310 -0.091 H14 X4C 42 
X4C H15 H15 H 0 1 N N N 19.227 3.930 64.919 5.547  -3.292 1.510  H15 X4C 43 
X4C H16 H16 H 0 1 N N N 17.457 4.092 64.659 5.208  -4.116 -0.031 H16 X4C 44 
X4C H17 H17 H 0 1 N N N 18.176 2.474 64.965 6.419  -2.813 0.034  H17 X4C 45 
X4C H18 H18 H 0 1 N N N 19.823 5.571 59.695 0.580  -0.069 1.217  H18 X4C 46 
X4C H19 H19 H 0 1 N N N 19.249 4.265 58.604 0.415  -1.832 1.396  H19 X4C 47 
X4C H20 H20 H 0 1 N N N 20.785 2.675 59.625 0.787  -0.338 -1.239 H20 X4C 48 
X4C H21 H21 H 0 1 N N N 21.506 3.972 60.637 0.622  -2.101 -1.060 H21 X4C 49 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
X4C C17 C15 DOUB Y N 1  
X4C C17 C16 SING Y N 2  
X4C C15 C10 SING Y N 3  
X4C C20 C16 SING N N 4  
X4C C26 C25 DOUB Y N 5  
X4C C26 C27 SING Y N 6  
X4C C25 C24 SING Y N 7  
X4C C16 C12 DOUB Y N 8  
X4C C27 C18 DOUB Y N 9  
X4C C24 C23 DOUB Y N 10 
X4C C10 N5  SING Y N 11 
X4C C10 C8  DOUB Y N 12 
X4C C18 C23 SING Y N 13 
X4C C18 N5  SING N N 14 
X4C C12 C8  SING Y N 15 
X4C N5  C1  SING Y N 16 
X4C C8  N4  SING Y N 17 
X4C C1  N4  DOUB Y N 18 
X4C C1  C11 SING N N 19 
X4C C11 C13 SING N N 20 
X4C C21 C14 DOUB Y N 21 
X4C C21 C22 SING Y N 22 
X4C C14 N6  SING Y N 23 
X4C C13 C2  SING N N 24 
X4C N6  C2  SING Y N 25 
X4C N6  C7  SING Y N 26 
X4C C22 N19 DOUB Y N 27 
X4C C2  N3  DOUB Y N 28 
X4C C7  N19 SING Y N 29 
X4C C7  C9  DOUB Y N 30 
X4C N3  C9  SING Y N 31 
X4C C9  C28 SING N N 32 
X4C C25 H1  SING N N 33 
X4C C24 H2  SING N N 34 
X4C C26 H3  SING N N 35 
X4C C17 H4  SING N N 36 
X4C C15 H5  SING N N 37 
X4C C23 H6  SING N N 38 
X4C C27 H7  SING N N 39 
X4C C12 H8  SING N N 40 
X4C C21 H9  SING N N 41 
X4C C14 H10 SING N N 42 
X4C C22 H11 SING N N 43 
X4C C20 H12 SING N N 44 
X4C C20 H13 SING N N 45 
X4C C20 H14 SING N N 46 
X4C C28 H15 SING N N 47 
X4C C28 H16 SING N N 48 
X4C C28 H17 SING N N 49 
X4C C11 H18 SING N N 50 
X4C C11 H19 SING N N 51 
X4C C13 H20 SING N N 52 
X4C C13 H21 SING N N 53 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
X4C SMILES           ACDLabs              12.01 "n2c1cc(ccc1n(c2CCc4nc(c3ncccn34)C)c5ccccc5)C"                                                                                            
X4C InChI            InChI                1.03  "InChI=1S/C23H21N5/c1-16-9-10-20-19(15-16)26-22(28(20)18-7-4-3-5-8-18)12-11-21-25-17(2)23-24-13-6-14-27(21)23/h3-10,13-15H,11-12H2,1-2H3" 
X4C InChIKey         InChI                1.03  VOYXDWSUNQJWTO-UHFFFAOYSA-N                                                                                                               
X4C SMILES_CANONICAL CACTVS               3.385 "Cc1ccc2n(c(CCc3nc(C)c4ncccn34)nc2c1)c5ccccc5"                                                                                            
X4C SMILES           CACTVS               3.385 "Cc1ccc2n(c(CCc3nc(C)c4ncccn34)nc2c1)c5ccccc5"                                                                                            
X4C SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "Cc1ccc2c(c1)nc(n2c3ccccc3)CCc4nc(c5n4cccn5)C"                                                                                            
X4C SMILES           "OpenEye OEToolkits" 1.7.6 "Cc1ccc2c(c1)nc(n2c3ccccc3)CCc4nc(c5n4cccn5)C"                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
X4C "SYSTEMATIC NAME" ACDLabs              12.01 "8-methyl-6-[2-(5-methyl-1-phenyl-1H-benzimidazol-2-yl)ethyl]imidazo[1,5-a]pyrimidine" 
X4C "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "8-methyl-6-[2-(5-methyl-1-phenyl-benzimidazol-2-yl)ethyl]imidazo[1,5-a]pyrimidine"    
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
X4C "Create component" 2014-03-13 PDBJ 
X4C "Initial release"  2014-06-04 RCSB 
# 
