data_O6C
# 
_chem_comp.id                                    O6C 
_chem_comp.name                                  "1-[2-(4-chloranylphenoxy)-2-methyl-propanoyl]-~{N}-[2-[2-(dimethylamino)ethyldisulfanyl]ethyl]piperidine-4-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H34 Cl N3 O3 S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-08-30 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        488.107 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     O6C 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8AV0 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
O6C C15 C1  C  0 1 N N N N N N 21.377 23.127 -3.254 3.510  0.004  1.632  C15 O6C 1  
O6C C16 C2  C  0 1 N N N N N N 21.679 24.502 -2.682 4.480  1.095  1.173  C16 O6C 2  
O6C C13 C3  C  0 1 N N N N N N 17.803 22.170 -2.173 -0.255 -0.177 0.962  C13 O6C 3  
O6C C17 C4  C  0 1 N N N N N N 16.836 22.319 -1.029 -1.225 -1.268 1.421  C17 O6C 4  
O6C C11 C5  C  0 1 N N N N N N 16.308 20.026 -2.790 -1.661 0.265  -1.054 C11 O6C 5  
O6C C10 C6  C  0 1 N N N N N N 14.915 19.475 -0.797 -3.467 -1.369 -1.304 C10 O6C 6  
O6C C2  C7  C  0 1 N N N N N N 14.168 19.931 0.437  -4.520 -2.269 -0.710 C2  O6C 7  
O6C C1  C8  C  0 1 N N N N N N 12.833 20.573 0.064  -5.633 -2.498 -1.735 C1  O6C 8  
O6C C6  C9  C  0 1 Y N N N N N 17.785 22.280 2.820  -6.908 1.397  1.199  C6  O6C 9  
O6C C5  C10 C  0 1 Y N N N N N 16.469 22.129 2.428  -6.311 0.162  1.363  C5  O6C 10 
O6C C4  C11 C  0 1 Y N N N N N 16.091 21.033 1.669  -5.656 -0.439 0.298  C4  O6C 11 
O6C C3  C12 C  0 1 N N N N N N 13.980 18.772 1.408  -3.891 -3.611 -0.332 C3  O6C 12 
O6C C14 C13 C  0 1 N N N N N N 19.316 22.259 -2.128 1.134  -0.504 1.447  C14 O6C 13 
O6C C8  C14 C  0 1 Y N N N N N 18.348 20.242 1.690  -6.204 1.435  -1.093 C8  O6C 14 
O6C C7  C15 C  0 1 Y N N N N N 18.707 21.329 2.443  -6.857 2.032  -0.029 C7  O6C 15 
O6C C18 C16 C  0 1 N N N N N N 15.463 21.827 -1.486 -2.641 -0.915 0.956  C18 O6C 16 
O6C C12 C17 C  0 1 N N N N N N 17.679 20.721 -2.749 -0.256 -0.101 -0.567 C12 O6C 17 
O6C C9  C18 C  0 1 Y N N N N N 17.032 20.092 1.295  -5.601 0.203  -0.931 C9  O6C 18 
O6C N1  N1  N  0 1 N N N N N N 15.505 20.371 -1.622 -2.621 -0.698 -0.497 N1  O6C 19 
O6C N2  N2  N  0 1 N N N N N N 19.963 22.780 -3.182 2.160  0.322  1.160  N2  O6C 20 
O6C O1  O1  O  0 1 N N N N N N 14.780 20.949 1.278  -5.068 -1.654 0.458  O1  O6C 21 
O6C O2  O2  O  0 1 N N N N N N 15.002 18.275 -1.001 -3.381 -1.250 -2.507 O2  O6C 22 
O6C O3  O3  O  0 1 N N N N N N 19.930 21.895 -1.126 1.329  -1.510 2.096  O3  O6C 23 
O6C S1  S1  S  0 1 N N N N N N 20.934 25.843 -3.651 6.152  0.701  1.757  S1  O6C 24 
O6C CL1 CL1 CL 0 0 N N N N N N 20.370 21.501 2.906  -7.614 3.581  -0.236 CL1 O6C 25 
O6C H17 H1  H  0 1 N N N N N N 21.951 22.378 -2.689 3.822  -0.956 1.220  H17 O6C 26 
O6C H18 H2  H  0 1 N N N N N N 21.689 23.109 -4.309 3.511  -0.049 2.720  H18 O6C 27 
O6C H20 H3  H  0 1 N N N N N N 22.770 24.644 -2.665 4.479  1.148  0.084  H20 O6C 28 
O6C H19 H4  H  0 1 N N N N N N 21.287 24.550 -1.655 4.168  2.055  1.584  H19 O6C 29 
O6C H15 H5  H  0 1 N N N N N N 17.466 22.850 -2.970 -0.567 0.783  1.373  H15 O6C 30 
O6C H23 H6  H  0 1 N N N N N N 17.179 21.719 -0.173 -0.928 -2.224 0.989  H23 O6C 31 
O6C H22 H7  H  0 1 N N N N N N 16.771 23.377 -0.733 -1.206 -1.338 2.509  H22 O6C 32 
O6C H12 H8  H  0 1 N N N N N N 15.773 20.341 -3.698 -1.915 1.270  -0.717 H12 O6C 33 
O6C H11 H9  H  0 1 N N N N N N 16.459 18.937 -2.812 -1.693 0.224  -2.143 H11 O6C 34 
O6C H2  H10 H  0 1 N N N N N N 12.312 20.895 0.978  -5.227 -3.023 -2.600 H2  O6C 35 
O6C H1  H11 H  0 1 N N N N N N 13.013 21.445 -0.581 -6.424 -3.097 -1.285 H1  O6C 36 
O6C H3  H12 H  0 1 N N N N N N 12.212 19.841 -0.474 -6.039 -1.537 -2.051 H3  O6C 37 
O6C H8  H13 H  0 1 N N N N N N 18.086 23.131 3.413  -7.418 1.864  2.028  H8  O6C 38 
O6C H7  H14 H  0 1 N N N N N N 15.733 22.866 2.714  -6.355 -0.336 2.321  H7  O6C 39 
O6C H6  H15 H  0 1 N N N N N N 13.436 19.123 2.297  -3.039 -3.440 0.326  H6  O6C 40 
O6C H5  H16 H  0 1 N N N N N N 13.405 17.973 0.918  -4.629 -4.227 0.182  H5  O6C 41 
O6C H4  H17 H  0 1 N N N N N N 14.964 18.383 1.710  -3.556 -4.122 -1.235 H4  O6C 42 
O6C H9  H18 H  0 1 N N N N N N 19.088 19.508 1.407  -6.165 1.933  -2.051 H9  O6C 43 
O6C H24 H19 H  0 1 N N N N N N 15.211 22.282 -2.455 -3.319 -1.735 1.193  H24 O6C 44 
O6C H25 H20 H  0 1 N N N N N N 14.703 22.107 -0.741 -2.976 -0.008 1.459  H25 O6C 45 
O6C H13 H21 H  0 1 N N N N N N 18.341 20.082 -2.147 0.452  0.660  -0.894 H13 O6C 46 
O6C H14 H22 H  0 1 N N N N N N 18.048 20.758 -3.785 0.032  -1.068 -0.979 H14 O6C 47 
O6C H10 H23 H  0 1 N N N N N N 16.740 19.242 0.696  -5.091 -0.263 -1.761 H10 O6C 48 
O6C H16 H24 H  0 1 N N N N N N 19.418 22.948 -4.004 2.004  1.126  0.641  H16 O6C 49 
O6C S2  S2  S  0 1 N Y N N N N ?      ?      ?      6.667  -0.924 0.619  S2  O6C 50 
O6C C20 C20 C  0 1 N Y N N N N ?      ?      ?      7.312  -0.171 -0.900 C20 O6C 51 
O6C C21 C21 C  0 1 N Y N N N N ?      ?      ?      8.651  0.508  -0.605 C21 O6C 52 
O6C N3  N3  N  0 1 N Y N N N N ?      ?      ?      9.173  1.118  -1.835 N3  O6C 53 
O6C C23 C23 C  0 1 N Y N N N N ?      ?      ?      10.329 1.977  -1.547 C23 O6C 54 
O6C C24 C24 C  0 1 N Y N N N N ?      ?      ?      9.514  0.091  -2.828 C24 O6C 55 
O6C H21 H25 H  0 1 N Y N N N N ?      ?      ?      7.455  -0.943 -1.656 H21 O6C 56 
O6C H26 H26 H  0 1 N Y N N N N ?      ?      ?      6.602  0.570  -1.268 H26 O6C 57 
O6C H27 H27 H  0 1 N Y N N N N ?      ?      ?      8.507  1.281  0.151  H27 O6C 58 
O6C H28 H28 H  0 1 N Y N N N N ?      ?      ?      9.361  -0.233 -0.237 H28 O6C 59 
O6C H29 H29 H  0 1 N Y N N N N ?      ?      ?      11.119 1.381  -1.090 H29 O6C 60 
O6C H30 H30 H  0 1 N Y N N N N ?      ?      ?      10.696 2.416  -2.475 H30 O6C 61 
O6C H31 H31 H  0 1 N Y N N N N ?      ?      ?      10.031 2.771  -0.862 H31 O6C 62 
O6C H32 H32 H  0 1 N Y N N N N ?      ?      ?      8.623  -0.486 -3.075 H32 O6C 63 
O6C H33 H33 H  0 1 N Y N N N N ?      ?      ?      9.898  0.570  -3.729 H33 O6C 64 
O6C H34 H34 H  0 1 N Y N N N N ?      ?      ?      10.274 -0.573 -2.418 H34 O6C 65 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
O6C S1  C16 SING N N 1  
O6C C15 N2  SING N N 2  
O6C C15 C16 SING N N 3  
O6C N2  C14 SING N N 4  
O6C C11 C12 SING N N 5  
O6C C11 N1  SING N N 6  
O6C C12 C13 SING N N 7  
O6C C13 C14 SING N N 8  
O6C C13 C17 SING N N 9  
O6C C14 O3  DOUB N N 10 
O6C N1  C18 SING N N 11 
O6C N1  C10 SING N N 12 
O6C C18 C17 SING N N 13 
O6C O2  C10 DOUB N N 14 
O6C C10 C2  SING N N 15 
O6C C1  C2  SING N N 16 
O6C C2  O1  SING N N 17 
O6C C2  C3  SING N N 18 
O6C O1  C4  SING N N 19 
O6C C9  C4  DOUB Y N 20 
O6C C9  C8  SING Y N 21 
O6C C4  C5  SING Y N 22 
O6C C8  C7  DOUB Y N 23 
O6C C5  C6  DOUB Y N 24 
O6C C7  C6  SING Y N 25 
O6C C7  CL1 SING N N 26 
O6C C15 H17 SING N N 27 
O6C C15 H18 SING N N 28 
O6C C16 H20 SING N N 29 
O6C C16 H19 SING N N 30 
O6C C13 H15 SING N N 31 
O6C C17 H23 SING N N 32 
O6C C17 H22 SING N N 33 
O6C C11 H12 SING N N 34 
O6C C11 H11 SING N N 35 
O6C C1  H2  SING N N 36 
O6C C1  H1  SING N N 37 
O6C C1  H3  SING N N 38 
O6C C6  H8  SING N N 39 
O6C C5  H7  SING N N 40 
O6C C3  H6  SING N N 41 
O6C C3  H5  SING N N 42 
O6C C3  H4  SING N N 43 
O6C C8  H9  SING N N 44 
O6C C18 H24 SING N N 45 
O6C C18 H25 SING N N 46 
O6C C12 H13 SING N N 47 
O6C C12 H14 SING N N 48 
O6C C9  H10 SING N N 49 
O6C N2  H16 SING N N 50 
O6C S1  S2  SING N N 51 
O6C S2  C20 SING N N 52 
O6C C20 C21 SING N N 53 
O6C C21 N3  SING N N 54 
O6C N3  C23 SING N N 55 
O6C N3  C24 SING N N 56 
O6C C20 H21 SING N N 57 
O6C C20 H26 SING N N 58 
O6C C21 H27 SING N N 59 
O6C C21 H28 SING N N 60 
O6C C23 H29 SING N N 61 
O6C C23 H30 SING N N 62 
O6C C23 H31 SING N N 63 
O6C C24 H32 SING N N 64 
O6C C24 H33 SING N N 65 
O6C C24 H34 SING N N 66 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
O6C InChI            InChI                1.06    "InChI=1S/C22H34ClN3O3S2/c1-22(2,29-19-7-5-18(23)6-8-19)21(28)26-12-9-17(10-13-26)20(27)24-11-15-30-31-16-14-25(3)4/h5-8,17H,9-16H2,1-4H3,(H,24,27)" 
O6C InChIKey         InChI                1.06    AHTLZLMZYZBDHQ-UHFFFAOYSA-N                                                                                                                          
O6C SMILES_CANONICAL CACTVS               3.385   "CN(C)CCSSCCNC(=O)C1CCN(CC1)C(=O)C(C)(C)Oc2ccc(Cl)cc2"                                                                                               
O6C SMILES           CACTVS               3.385   "CN(C)CCSSCCNC(=O)C1CCN(CC1)C(=O)C(C)(C)Oc2ccc(Cl)cc2"                                                                                               
O6C SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CC(C)(C(=O)N1CCC(CC1)C(=O)NCCSSCCN(C)C)Oc2ccc(cc2)Cl"                                                                                               
O6C SMILES           "OpenEye OEToolkits" 3.1.0.0 "CC(C)(C(=O)N1CCC(CC1)C(=O)NCCSSCCN(C)C)Oc2ccc(cc2)Cl"                                                                                               
# 
_pdbx_chem_comp_identifier.comp_id           O6C 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   3.1.0.0 
_pdbx_chem_comp_identifier.identifier        "1-[2-(4-chloranylphenoxy)-2-methyl-propanoyl]-~{N}-[2-[2-(dimethylamino)ethyldisulfanyl]ethyl]piperidine-4-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
O6C "Create component" 2022-08-30 PDBE 
O6C "Initial release"  2023-04-26 RCSB 
O6C "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            O6C 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               S1 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
