data_N1C
# 
_chem_comp.id                                    N1C 
_chem_comp.name                                  
;N1-CYCLIC INOSINE 5'-DIPHOSPHORIBOSE
;
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C15 H20 N4 O14 P2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2007-04-13 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        542.285 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     N1C 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
N1C O1B    O1B    O 0 1 N N N 5.561  3.510  3.387  5.561  3.510  3.387  O1B    N1C 1  
N1C PB     PB     P 0 1 N N N 4.162  4.101  3.481  4.162  4.101  3.481  PB     N1C 2  
N1C O3A    O3A    O 0 1 N N N 3.629  3.954  4.990  3.629  3.954  4.990  O3A    N1C 3  
N1C O2B    O2B    O 0 1 N N N 3.874  5.544  3.058  3.874  5.544  3.058  O2B    N1C 4  
N1C O5D    O5D    O 0 1 N N N 3.165  3.157  2.632  3.165  3.157  2.632  O5D    N1C 5  
N1C C5D    C5D    C 0 1 N N N 1.756  3.396  2.690  1.756  3.396  2.690  C5D    N1C 6  
N1C C4D    C4D    C 0 1 N N R 1.192  3.662  1.287  1.192  3.662  1.287  C4D    N1C 7  
N1C C3D    C3D    C 0 1 N N S -0.307 3.463  1.269  -0.307 3.463  1.269  C3D    N1C 8  
N1C O3D    O3D    O 0 1 N N N -0.890 4.584  0.591  -0.890 4.584  0.591  O3D    N1C 9  
N1C C2D    C2D    C 0 1 N N R -0.540 2.156  0.527  -0.540 2.156  0.527  C2D    N1C 10 
N1C O2D    O2D    O 0 1 N N N -1.350 2.416  -0.624 -1.350 2.416  -0.624 O2D    N1C 11 
N1C O4D    O4D    O 0 1 N N N 1.690  2.743  0.305  1.690  2.743  0.305  O4D    N1C 12 
N1C C1D    C1D    C 0 1 N N R 0.831  1.612  0.125  0.831  1.612  0.125  C1D    N1C 13 
N1C N1     N1     N 0 1 N N R 1.306  0.580  1.065  1.306  0.580  1.065  N1     N1C 14 
N1C C6     C6     C 0 1 N N N 0.422  -0.351 1.672  0.422  -0.351 1.672  C6     N1C 15 
N1C O6     O6     O 0 1 N N N -0.795 -0.396 1.404  -0.795 -0.396 1.404  O6     N1C 16 
N1C C5     C5     C 0 1 Y N N 0.995  -1.327 2.628  0.995  -1.327 2.628  C5     N1C 17 
N1C N7     N7     N 0 1 Y N N 0.454  -2.319 3.369  0.454  -2.319 3.369  N7     N1C 18 
N1C C8     C8     C 0 1 Y N N 1.464  -2.881 4.069  1.464  -2.881 4.069  C8     N1C 19 
N1C C2     C2     C 0 1 N N N 2.614  0.535  1.390  2.614  0.535  1.390  C2     N1C 20 
N1C N3     N3     N 0 1 N N N 3.127  -0.350 2.263  3.127  -0.350 2.263  N3     N1C 21 
N1C C4     C4     C 0 1 Y N N 2.350  -1.274 2.893  2.350  -1.274 2.893  C4     N1C 22 
N1C N9     N9     N 0 1 Y N N 2.610  -2.251 3.771  2.610  -2.251 3.771  N9     N1C 23 
N1C "C1'"  "C1'"  C 0 1 N N R 3.915  -2.596 4.389  3.915  -2.596 4.389  "C1'"  N1C 24 
N1C "O4'"  "O4'"  O 0 1 N N N 4.005  -1.740 5.535  4.005  -1.740 5.535  "O4'"  N1C 25 
N1C "C2'"  "C2'"  C 0 1 N N R 5.137  -2.306 3.526  5.137  -2.306 3.526  "C2'"  N1C 26 
N1C "O2'"  "O2'"  O 0 1 N N N 6.065  -3.383 3.711  6.065  -3.383 3.711  "O2'"  N1C 27 
N1C "C3'"  "C3'"  C 0 1 N N S 5.700  -1.082 4.161  5.700  -1.082 4.161  "C3'"  N1C 28 
N1C "O3'"  "O3'"  O 0 1 N N N 6.795  -0.460 3.732  6.795  -0.460 3.732  "O3'"  N1C 29 
N1C "C4'"  "C4'"  C 0 1 N N S 4.996  -0.736 5.221  4.996  -0.736 5.221  "C4'"  N1C 30 
N1C "C5'"  "C5'"  C 0 1 N N N 5.175  0.535  6.022  5.175  0.535  6.022  "C5'"  N1C 31 
N1C "O5'"  "O5'"  O 0 1 N N N 4.473  1.611  5.393  4.473  1.611  5.393  "O5'"  N1C 32 
N1C PA     PA     P 0 1 N N N 4.419  3.066  6.079  4.419  3.066  6.079  PA     N1C 33 
N1C O1A    O1A    O 0 1 N N N 5.832  3.585  6.240  5.832  3.585  6.240  O1A    N1C 34 
N1C O2A    O2A    O 0 1 N N N 3.506  3.006  7.278  3.506  3.006  7.278  O2A    N1C 35 
N1C HO1B   HO1B   H 0 0 N N N 6.159  4.163  3.044  6.159  4.163  3.043  HO1B   N1C 36 
N1C H5D1   H5D1   H 0 0 N N N 1.259  2.512  3.115  1.259  2.512  3.115  H5D1   N1C 37 
N1C H5D2   H5D2   H 0 0 N N N 1.566  4.274  3.326  1.566  4.273  3.326  H5D2   N1C 38 
N1C H4D    H4D    H 0 1 N N N 1.494  4.693  1.050  1.494  4.693  1.050  H4D    N1C 39 
N1C H3D    H3D    H 0 1 N N N -0.762 3.406  2.269  -0.762 3.406  2.269  H3D    N1C 40 
N1C HO3D   HO3D   H 0 0 N N N -1.834 4.483  0.566  -1.834 4.483  0.566  HO3D   N1C 41 
N1C H2D    H2D    H 0 1 N N N -1.062 1.417  1.152  -1.062 1.417  1.152  H2D    N1C 42 
N1C HO2D   HO2D   H 0 0 N N N -1.501 1.605  -1.095 -1.502 1.605  -1.095 HO2D   N1C 43 
N1C H1D    H1D    H 0 1 N N N 0.806  1.174  -0.884 0.806  1.174  -0.884 H1D    N1C 44 
N1C H8     H8     H 0 1 N N N 1.364  -3.706 4.759  1.364  -3.706 4.759  H8     N1C 45 
N1C H2     H2     H 0 1 N N N 3.283  1.245  0.926  3.283  1.245  0.926  H2     N1C 46 
N1C "H1'"  "H1'"  H 0 1 N N N 3.930  -3.679 4.583  3.930  -3.679 4.583  "H1'"  N1C 47 
N1C "H2'"  "H2'"  H 0 1 N N N 4.923  -2.191 2.453  4.923  -2.191 2.453  "H2'"  N1C 48 
N1C "HO2'" "HO2'" H 0 0 N N N 6.839  -3.228 3.183  6.839  -3.228 3.183  "HO2'" N1C 49 
N1C "HO3'" "HO3'" H 0 0 N N N 6.968  0.294  4.284  6.968  0.294  4.284  "HO3'" N1C 50 
N1C "H5'1" "H5'1" H 0 0 N N N 4.777  0.385  7.036  4.777  0.385  7.036  "H5'1" N1C 51 
N1C "H5'2" "H5'2" H 0 0 N N N 6.245  0.782  6.078  6.245  0.782  6.078  "H5'2" N1C 52 
N1C HO2A   HO2A   H 0 0 N N N 3.967  3.326  8.044  3.967  3.326  8.044  HO2A   N1C 53 
N1C HC3    HC3    H 0 1 N N N 6.402  -0.356 3.726  6.402  -0.356 3.726  HC3    N1C 54 
N1C HC4    HC4    H 0 1 N N N 5.270  0.221  5.688  5.270  0.221  5.688  HC4    N1C 55 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
N1C O1B   PB     SING N N 1  
N1C O1B   HO1B   SING N N 2  
N1C PB    O5D    SING N N 3  
N1C PB    O2B    DOUB N N 4  
N1C PB    O3A    SING N N 5  
N1C O3A   PA     SING N N 6  
N1C O5D   C5D    SING N N 7  
N1C C5D   C4D    SING N N 8  
N1C C5D   H5D1   SING N N 9  
N1C C5D   H5D2   SING N N 10 
N1C C4D   O4D    SING N N 11 
N1C C4D   C3D    SING N N 12 
N1C C4D   H4D    SING N N 13 
N1C C3D   C2D    SING N N 14 
N1C C3D   O3D    SING N N 15 
N1C C3D   H3D    SING N N 16 
N1C O3D   HO3D   SING N N 17 
N1C C2D   O2D    SING N N 18 
N1C C2D   C1D    SING N N 19 
N1C C2D   H2D    SING N N 20 
N1C O2D   HO2D   SING N N 21 
N1C O4D   C1D    SING N N 22 
N1C C1D   N1     SING N N 23 
N1C C1D   H1D    SING N N 24 
N1C N1    C2     SING N N 25 
N1C N1    C6     SING N N 26 
N1C C6    O6     DOUB N N 27 
N1C C6    C5     SING N N 28 
N1C C5    C4     DOUB Y N 29 
N1C C5    N7     SING Y N 30 
N1C N7    C8     DOUB Y N 31 
N1C C8    N9     SING Y N 32 
N1C C8    H8     SING N N 33 
N1C C2    N3     DOUB N N 34 
N1C C2    H2     SING N N 35 
N1C N3    C4     SING N N 36 
N1C C4    N9     SING Y N 37 
N1C N9    "C1'"  SING N N 38 
N1C "C1'" "C2'"  SING N N 39 
N1C "C1'" "O4'"  SING N N 40 
N1C "C1'" "H1'"  SING N N 41 
N1C "O4'" "C4'"  SING N N 42 
N1C "C2'" "O2'"  SING N N 43 
N1C "C2'" "C3'"  SING N N 44 
N1C "C2'" "H2'"  SING N N 45 
N1C "O2'" "HO2'" SING N N 46 
N1C "C3'" "O3'"  SING N N 47 
N1C "C3'" "C4'"  SING N N 48 
N1C "O3'" "HO3'" SING N N 49 
N1C "C4'" "C5'"  SING N N 50 
N1C "C5'" "O5'"  SING N N 51 
N1C "C5'" "H5'1" SING N N 52 
N1C "C5'" "H5'2" SING N N 53 
N1C "O5'" PA     SING N N 54 
N1C PA    O1A    DOUB N N 55 
N1C PA    O2A    SING N N 56 
N1C O2A   HO2A   SING N N 57 
N1C HC3   "C3'"  SING N N 58 
N1C HC4   "C4'"  SING N N 59 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
N1C SMILES           ACDLabs              11.02 "O=C2N3C=Nc1n(cnc12)C5OC(COP(=O)(O)OP(=O)(O)OCC4OC3C(O)C4O)C(O)C5O" 
N1C SMILES_CANONICAL CACTVS               3.352 "O[C@H]1[C@@H](O)[C@H]2O[C@@H]1CO[P](O)(=O)O[P](O)(=O)OC[C@@H]3O[C@H]([C@H](O)[C@@H]3O)n4cnc5C(=O)[N@]2C=Nc45" 
N1C SMILES           CACTVS               3.352 "O[CH]1[CH](O)[CH]2O[CH]1CO[P](O)(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O)[CH]3O)n4cnc5C(=O)[N]2C=Nc45" 
N1C SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1nc2c3n1[C@H]4[C@@H](C(C(O4)CO[P@@](=O)(O[P@](=O)(OC[C@@H]5[C@H]([C@H]([C@@H](O5)N(C2=O)C=N3)O)O)O)O)O)O" 
N1C SMILES           "OpenEye OEToolkits" 1.7.0 "c1nc2c3n1C4C(C(C(O4)COP(=O)(OP(=O)(OCC5C(C(C(O5)N(C2=O)C=N3)O)O)O)O)O)O" 
N1C InChI            InChI                1.03  
"InChI=1S/C15H20N4O14P2/c20-8-5-1-29-34(25,26)33-35(27,28)30-2-6-9(21)11(23)15(32-6)19-4-17-12-7(13(19)24)16-3-18(12)14(31-5)10(8)22/h3-6,8-11,14-15,20-23H,1-2H2,(H,25,26)(H,27,28)/t5?,6-,8-,9-,10-,11-,14-,15-/m1/s1" 
N1C InChIKey         InChI                1.03  REBZYOYBILSKBL-ATYUDWGKSA-N 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
N1C "SYSTEMATIC NAME" ACDLabs 11.02 
"(2R,3R,4S,5R,8S,10S,13S,14S,15R,16R)-3,4,8,10,14,15-hexahydroxy-7,9,11,25,26-pentaoxa-1,17,19,22-tetraaza-8,10-diphosphapentacyclo[18.3.1.1~2,5~.1~13,16~.0~17,21~]hexacosa-18,20,22-trien-24-one 8,10-dioxide (non-preferred name)" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
N1C "Create component"  2007-04-13 RCSB 
N1C "Modify descriptor" 2011-06-04 RCSB 
# 
