data_HNC
# 
_chem_comp.id                                    HNC 
_chem_comp.name                                  "S-[(1S,2R)-2-hydroxy-1-(2-oxoethyl)heptyl]-L-cysteine" 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C12 H23 N O4 S" 
_chem_comp.mon_nstd_parent_comp_id               CYS 
_chem_comp.pdbx_synonyms                         "Cysteine covalently modified with 4-hydroxy-2-nonenal" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2009-09-17 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        277.380 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     HNC 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3JS1 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              N 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
HNC C    C    C 0 1 N N N N N N 1.603  -0.420 -11.292 4.058  1.941  -0.386 C    HNC 1  
HNC N    N    N 0 1 N N N N N N 0.319  -1.879 -12.612 3.440  0.737  1.633  N    HNC 2  
HNC O    O    O 0 1 N N N N N N 1.480  0.572  -12.004 4.000  2.951  0.275  O    HNC 3  
HNC CA   CA   C 0 1 N N R N N N 1.529  -1.826 -11.817 3.522  0.646  0.169  CA   HNC 4  
HNC CB   CB   C 0 1 N N N N N N 2.737  -2.134 -12.696 2.128  0.383  -0.405 CB   HNC 5  
HNC SG   SG   S 0 1 N N N N N N 2.548  -3.625 -13.628 1.483  -1.175 0.262  SG   HNC 6  
HNC CAA  CAA  C 0 1 N N N N N N 10.738 -3.196 -16.744 -6.910 2.099  -0.424 CAA  HNC 7  
HNC OAC  OAC  O 0 1 N N N N N N 4.408  -6.044 -16.527 0.380  -4.612 -0.168 OAC  HNC 8  
HNC OAE  OAE  O 0 1 N N N N N N 4.712  -4.039 -16.050 -1.084 -0.292 1.634  OAE  HNC 9  
HNC CAF  CAF  C 0 1 N N N N N N 3.577  -6.047 -15.607 -0.079 -3.685 -0.792 CAF  HNC 10 
HNC CAH  CAH  C 0 1 N N N N N N 10.048 -2.865 -15.436 -5.489 2.153  0.141  CAH  HNC 11 
HNC CAI  CAI  C 0 1 N N N N N N 8.978  -3.898 -15.098 -4.686 0.962  -0.386 CAI  HNC 12 
HNC CAJ  CAJ  C 0 1 N N N N N N 7.570  -3.382 -15.406 -3.265 1.016  0.178  CAJ  HNC 13 
HNC CAK  CAK  C 0 1 N N N N N N 4.041  -5.876 -14.165 -0.831 -2.593 -0.075 CAK  HNC 14 
HNC CAL  CAL  C 0 1 N N N N N N 6.551  -4.024 -14.459 -2.462 -0.175 -0.348 CAL  HNC 15 
HNC CAP  CAP  C 0 1 N N R N N N 5.088  -3.645 -14.720 -1.041 -0.121 0.216  CAP  HNC 16 
HNC CAQ  CAQ  C 0 1 N N S N N N 4.152  -4.399 -13.761 -0.202 -1.239 -0.406 CAQ  HNC 17 
HNC OXT  OXT  O 0 1 N N N N N N 1.697  -0.327 -9.879  4.595  1.972  -1.615 OXT  HNC 18 
HNC HN   HN   H 0 1 N N N N N N 0.210  -2.797 -12.994 4.356  0.846  2.040  HN   HNC 19 
HNC HNA  HNA  H 0 1 N N N N N N -0.469 -1.663 -12.035 2.827  1.488  1.914  HNA  HNC 20 
HNC HA   HA   H 0 1 N N N N N N 1.523  -2.561 -10.999 4.188  -0.171 -0.107 HA   HNC 21 
HNC HB   HB   H 0 1 N N N N N N 2.874  -1.300 -13.401 1.462  1.201  -0.129 HB   HNC 22 
HNC HBA  HBA  H 0 1 N N N N N N 3.619  -2.241 -12.047 2.190  0.316  -1.491 HBA  HNC 23 
HNC HAA  HAA  H 0 1 N N N N N N 11.502 -2.434 -16.959 -6.871 2.141  -1.512 HAA  HNC 24 
HNC HAAA HAAA H 0 0 N N N N N N 11.216 -4.183 -16.666 -7.390 1.172  -0.112 HAAA HNC 25 
HNC HAAB HAAB H 0 0 N N N N N N 9.996  -3.211 -17.556 -7.483 2.948  -0.049 HAAB HNC 26 
HNC HOAE HOAE H 0 0 N N N N N N 4.617  -4.984 -16.086 -1.472 -1.131 1.918  HOAE HNC 27 
HNC HAF  HAF  H 0 1 N N N N N N 2.527  -6.170 -15.827 0.049  -3.639 -1.863 HAF  HNC 28 
HNC HAH  HAH  H 0 1 N N N N N N 10.798 -2.853 -14.631 -5.010 3.081  -0.171 HAH  HNC 29 
HNC HAHA HAHA H 0 0 N N N N N N 9.573  -1.877 -15.524 -5.529 2.112  1.229  HAHA HNC 30 
HNC HAI  HAI  H 0 1 N N N N N N 9.160  -4.803 -15.696 -5.166 0.034  -0.074 HAI  HNC 31 
HNC HAIA HAIA H 0 0 N N N N N N 9.041  -4.132 -14.025 -4.647 1.003  -1.474 HAIA HNC 32 
HNC HAJ  HAJ  H 0 1 N N N N N N 7.548  -2.290 -15.275 -2.785 1.944  -0.133 HAJ  HNC 33 
HNC HAJA HAJA H 0 0 N N N N N N 7.310  -3.637 -16.444 -3.304 0.975  1.267  HAJA HNC 34 
HNC HAK  HAK  H 0 1 N N N N N N 3.313  -6.366 -13.502 -1.873 -2.599 -0.396 HAK  HNC 35 
HNC HAKA HAKA H 0 0 N N N N N N 5.031  -6.343 -14.058 -0.781 -2.764 1.000  HAKA HNC 36 
HNC HAL  HAL  H 0 1 N N N N N N 6.637  -5.115 -14.568 -2.941 -1.103 -0.036 HAL  HNC 37 
HNC HALA HALA H 0 0 N N N N N N 6.800  -3.705 -13.436 -2.422 -0.134 -1.436 HALA HNC 38 
HNC HAP  HAP  H 0 1 N N N N N N 4.998  -2.558 -14.579 -0.592 0.844  -0.020 HAP  HNC 39 
HNC HAQ  HAQ  H 0 1 N N N N N N 4.599  -4.352 -12.757 -0.169 -1.109 -1.488 HAQ  HNC 40 
HNC HOXT HOXT H 0 0 N N N N N N 1.649  0.585  -9.617  4.922  2.827  -1.930 HOXT HNC 41 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
HNC O   C    DOUB N N 1  
HNC CA  C    SING N N 2  
HNC C   OXT  SING N N 3  
HNC N   CA   SING N N 4  
HNC N   HN   SING N N 5  
HNC N   HNA  SING N N 6  
HNC CB  CA   SING N N 7  
HNC CA  HA   SING N N 8  
HNC SG  CB   SING N N 9  
HNC CB  HB   SING N N 10 
HNC CB  HBA  SING N N 11 
HNC CAQ SG   SING N N 12 
HNC CAA CAH  SING N N 13 
HNC CAA HAA  SING N N 14 
HNC CAA HAAA SING N N 15 
HNC CAA HAAB SING N N 16 
HNC OAC CAF  DOUB N N 17 
HNC OAE CAP  SING N N 18 
HNC OAE HOAE SING N N 19 
HNC CAF CAK  SING N N 20 
HNC CAF HAF  SING N N 21 
HNC CAH CAI  SING N N 22 
HNC CAH HAH  SING N N 23 
HNC CAH HAHA SING N N 24 
HNC CAJ CAI  SING N N 25 
HNC CAI HAI  SING N N 26 
HNC CAI HAIA SING N N 27 
HNC CAJ CAL  SING N N 28 
HNC CAJ HAJ  SING N N 29 
HNC CAJ HAJA SING N N 30 
HNC CAK CAQ  SING N N 31 
HNC CAK HAK  SING N N 32 
HNC CAK HAKA SING N N 33 
HNC CAP CAL  SING N N 34 
HNC CAL HAL  SING N N 35 
HNC CAL HALA SING N N 36 
HNC CAP CAQ  SING N N 37 
HNC CAP HAP  SING N N 38 
HNC CAQ HAQ  SING N N 39 
HNC OXT HOXT SING N N 40 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
HNC SMILES           ACDLabs              11.02 "O=C(O)C(N)CSC(C(O)CCCCC)CC=O"                                                                                             
HNC SMILES_CANONICAL CACTVS               3.352 "CCCCC[C@@H](O)[C@H](CC=O)SC[C@H](N)C(O)=O"                                                                                
HNC SMILES           CACTVS               3.352 "CCCCC[CH](O)[CH](CC=O)SC[CH](N)C(O)=O"                                                                                    
HNC SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CCCCC[C@H]([C@H](CC=O)SC[C@@H](C(=O)O)N)O"                                                                                
HNC SMILES           "OpenEye OEToolkits" 1.7.0 "CCCCCC(C(CC=O)SCC(C(=O)O)N)O"                                                                                             
HNC InChI            InChI                1.03  "InChI=1S/C12H23NO4S/c1-2-3-4-5-10(15)11(6-7-14)18-8-9(13)12(16)17/h7,9-11,15H,2-6,8,13H2,1H3,(H,16,17)/t9-,10+,11-/m0/s1" 
HNC InChIKey         InChI                1.03  SALPDUSHMTYYOH-AXFHLTTASA-N                                                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
HNC "SYSTEMATIC NAME" ACDLabs              11.02 "S-[(3S,4R)-4-hydroxy-1-oxononan-3-yl]-L-cysteine"                            
HNC "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "(2R)-2-azanyl-3-[(3S,4R)-4-hydroxy-1-oxo-nonan-3-yl]sulfanyl-propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
HNC "Create component"  2009-09-17 RCSB 
HNC "Modify descriptor" 2011-06-04 RCSB 
HNC "Modify synonyms"   2021-03-01 PDBE 
HNC "Modify PCM"        2024-09-27 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      HNC 
_pdbx_chem_comp_synonyms.name         "Cysteine covalently modified with 4-hydroxy-2-nonenal" 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
