data_G5C
#

_chem_comp.id                                   G5C
_chem_comp.name                                 "2-[[2-methoxy-4-(2-oxidanylidenepyrrolidin-1-yl)phenyl]amino]-4-(methylamino)-7H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C19 H19 N7 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-07-23
_chem_comp.pdbx_modified_date                   2021-05-07
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       377.400
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    G5C
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7CLH
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
G5C  C10  C1   C  0  1  N  N  N   0.134  35.475   4.768   2.823   3.846   1.106  C10   G5C   1  
G5C  C12  C2   C  0  1  Y  N  N  -0.767  38.683   7.193   3.348   0.002  -0.191  C12   G5C   2  
G5C  C14  C3   C  0  1  N  N  N  -0.525  41.092   7.258   5.835   0.152   0.288  C14   G5C   3  
G5C  C16  C4   C  0  1  N  N  N  -1.055  41.986   5.103   6.371  -2.132  -0.210  C16   G5C   4  
G5C  C19  C5   C  0  1  Y  N  N  -0.687  38.480   8.562   2.286  -0.733  -0.700  C19   G5C   5  
G5C  C20  C6   C  0  1  Y  N  N  -0.585  37.188   9.058   1.026  -0.169  -0.774  C20   G5C   6  
G5C  C22  C7   C  0  1  Y  N  N   1.346  32.791  11.232  -2.475  -1.140   0.318  C22   G5C   7  
G5C  C24  C8   C  0  1  Y  N  N   2.764  33.085  12.928  -4.702  -1.700   0.410  C24   G5C   8  
G5C  N26  N1   N  0  1  N  N  N   4.395  34.229  14.688  -7.266  -1.590   0.300  N26   G5C   9  
G5C  C27  C9   C  0  1  Y  N  N   2.440  31.737  12.838  -3.944  -2.784   0.739  C27   G5C  10  
G5C  N13  N2   N  0  1  N  N  N  -0.836  40.019   6.653   4.624  -0.572  -0.118  N13   G5C  11  
G5C  C17  C10  C  0  1  N  N  N  -1.201  40.415   5.170   4.897  -1.855  -0.409  C17   G5C  12  
G5C  N21  N3   N  0  1  Y  N  N   0.567  33.155  10.183  -1.421  -0.347   0.130  N21   G5C  13  
G5C  C23  C11  C  0  1  Y  N  N   2.051  33.761  11.900  -3.759  -0.606   0.128  C23   G5C  14  
G5C  C25  C12  C  0  1  N  N  N   3.702  33.726  13.947  -6.132  -1.639   0.348  C25   G5C  15  
G5C  C01  C13  C  0  1  N  N  N   2.013  37.524  11.998  -5.245   2.706  -0.853  C01   G5C  16  
G5C  C03  C14  C  0  1  Y  N  N   1.916  35.096  11.439  -3.885   0.736  -0.255  C03   G5C  17  
G5C  C05  C15  C  0  1  Y  N  N   0.459  34.404   9.782  -1.581   0.914  -0.233  C05   G5C  18  
G5C  C07  C16  C  0  1  Y  N  N  -0.525  36.109   8.185   0.821   1.132  -0.341  C07   G5C  19  
G5C  C08  C17  C  0  1  Y  N  N  -0.586  36.328   6.825   1.886   1.871   0.170  C08   G5C  20  
G5C  C11  C18  C  0  1  Y  N  N  -0.701  37.609   6.321   3.148   1.307   0.238  C11   G5C  21  
G5C  C15  C19  C  0  1  N  N  N  -1.004  42.396   6.294   6.870  -0.938   0.641  C15   G5C  22  
G5C  N02  N4   N  0  1  N  N  N   2.608  36.203  12.060  -5.133   1.301  -0.452  N02   G5C  23  
G5C  N04  N5   N  0  1  Y  N  N   1.136  35.356  10.409  -2.779   1.453  -0.425  N04   G5C  24  
G5C  N06  N6   N  0  1  N  N  N  -0.406  34.734   8.653  -0.458   1.703  -0.417  N06   G5C  25  
G5C  N28  N7   N  0  1  Y  N  N   1.599  31.579  11.818  -2.625  -2.452   0.685  N28   G5C  26  
G5C  O09  O1   O  0  1  N  N  N  -0.534  35.234   5.968   1.686   3.148   0.595  O09   G5C  27  
G5C  O18  O2   O  0  1  N  N  N  -1.528  39.670   4.303   4.080  -2.672  -0.778  O18   G5C  28  
G5C  H1   H1   H  0  1  N  N  N   0.128  34.562   4.154   2.527   4.850   1.409  H103  G5C  29  
G5C  H2   H2   H  0  1  N  N  N  -0.372  36.286   4.223   3.222   3.310   1.967  H101  G5C  30  
G5C  H3   H3   H  0  1  N  N  N   1.173  35.767   4.979   3.588   3.911   0.332  H102  G5C  31  
G5C  H4   H4   H  0  1  N  N  N   0.563  41.127   7.419   6.200   0.767  -0.535  H141  G5C  32  
G5C  H5   H5   H  0  1  N  N  N  -1.041  41.136   8.228   5.629   0.773   1.160  H142  G5C  33  
G5C  H6   H6   H  0  1  N  N  N  -0.133  42.259   4.568   6.514  -3.069   0.326  H162  G5C  34  
G5C  H7   H7   H  0  1  N  N  N  -1.922  42.426   4.587   6.887  -2.158  -1.170  H161  G5C  35  
G5C  H8   H8   H  0  1  N  N  N  -0.704  39.322   9.238   2.444  -1.747  -1.038  H191  G5C  36  
G5C  H9   H9   H  0  1  N  N  N  -0.552  37.021  10.125   0.201  -0.743  -1.171  H201  G5C  37  
G5C  H10  H10  H  0  1  N  N  N   2.807  30.953  13.484  -4.331  -3.757   1.002  H271  G5C  38  
G5C  H11  H11  H  0  1  N  N  N   2.664  38.244  12.515  -4.786   3.339  -0.094  H013  G5C  39  
G5C  H12  H12  H  0  1  N  N  N   1.897  37.825  10.946  -4.735   2.854  -1.806  H011  G5C  40  
G5C  H13  H13  H  0  1  N  N  N   1.027  37.505  12.485  -6.297   2.971  -0.959  H012  G5C  41  
G5C  H14  H14  H  0  1  N  N  N  -0.739  37.772   5.254   3.974   1.879   0.634  H111  G5C  42  
G5C  H15  H15  H  0  1  N  N  N  -0.274  43.214   6.379   7.874  -0.637   0.340  H152  G5C  43  
G5C  H16  H16  H  0  1  N  N  N  -1.995  42.754   6.611   6.839  -1.178   1.704  H151  G5C  44  
G5C  H17  H17  H  0  1  N  N  N   2.717  35.975  13.028  -5.933   0.768  -0.325  H021  G5C  45  
G5C  H18  H18  H  0  1  N  N  N  -0.922  34.009   8.196  -0.555   2.651  -0.599  H061  G5C  46  
G5C  H19  H19  H  0  1  N  N  N   1.210  30.706  11.524  -1.894  -3.059   0.878  H281  G5C  47  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
G5C  O18  C17  DOUB  N  N   1  
G5C  C10  O09  SING  N  N   2  
G5C  C16  C17  SING  N  N   3  
G5C  C16  C15  SING  N  N   4  
G5C  C17  N13  SING  N  N   5  
G5C  O09  C08  SING  N  N   6  
G5C  C15  C14  SING  N  N   7  
G5C  C11  C08  DOUB  Y  N   8  
G5C  C11  C12  SING  Y  N   9  
G5C  N13  C12  SING  N  N  10  
G5C  N13  C14  SING  N  N  11  
G5C  C08  C07  SING  Y  N  12  
G5C  C12  C19  DOUB  Y  N  13  
G5C  C07  N06  SING  N  N  14  
G5C  C07  C20  DOUB  Y  N  15  
G5C  C19  C20  SING  Y  N  16  
G5C  N06  C05  SING  N  N  17  
G5C  C05  N21  DOUB  Y  N  18  
G5C  C05  N04  SING  Y  N  19  
G5C  N21  C22  SING  Y  N  20  
G5C  N04  C03  DOUB  Y  N  21  
G5C  C22  N28  SING  Y  N  22  
G5C  C22  C23  DOUB  Y  N  23  
G5C  C03  C23  SING  Y  N  24  
G5C  C03  N02  SING  N  N  25  
G5C  N28  C27  SING  Y  N  26  
G5C  C23  C24  SING  Y  N  27  
G5C  C01  N02  SING  N  N  28  
G5C  C27  C24  DOUB  Y  N  29  
G5C  C24  C25  SING  N  N  30  
G5C  C25  N26  TRIP  N  N  31  
G5C  C10  H1   SING  N  N  32  
G5C  C10  H2   SING  N  N  33  
G5C  C10  H3   SING  N  N  34  
G5C  C14  H4   SING  N  N  35  
G5C  C14  H5   SING  N  N  36  
G5C  C16  H6   SING  N  N  37  
G5C  C16  H7   SING  N  N  38  
G5C  C19  H8   SING  N  N  39  
G5C  C20  H9   SING  N  N  40  
G5C  C27  H10  SING  N  N  41  
G5C  C01  H11  SING  N  N  42  
G5C  C01  H12  SING  N  N  43  
G5C  C01  H13  SING  N  N  44  
G5C  C11  H14  SING  N  N  45  
G5C  C15  H15  SING  N  N  46  
G5C  C15  H16  SING  N  N  47  
G5C  N02  H17  SING  N  N  48  
G5C  N06  H18  SING  N  N  49  
G5C  N28  H19  SING  N  N  50  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
G5C  InChI             InChI                 1.03   "InChI=1S/C19H19N7O2/c1-21-17-16-11(9-20)10-22-18(16)25-19(24-17)23-13-6-5-12(8-14(13)28-2)26-7-3-4-15(26)27/h5-6,8,10H,3-4,7H2,1-2H3,(H3,21,22,23,24,25)"  
G5C  InChIKey          InChI                 1.03   MOBTUTZGYGGLCO-UHFFFAOYSA-N  
G5C  SMILES_CANONICAL  CACTVS                3.385  "CNc1nc(Nc2ccc(cc2OC)N3CCCC3=O)nc4[nH]cc(C#N)c14"  
G5C  SMILES            CACTVS                3.385  "CNc1nc(Nc2ccc(cc2OC)N3CCCC3=O)nc4[nH]cc(C#N)c14"  
G5C  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CNc1c2c(c[nH]c2nc(n1)Nc3ccc(cc3OC)N4CCCC4=O)C#N"  
G5C  SMILES            "OpenEye OEToolkits"  2.0.7  "CNc1c2c(c[nH]c2nc(n1)Nc3ccc(cc3OC)N4CCCC4=O)C#N"  
#
_pdbx_chem_comp_identifier.comp_id          G5C
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "2-[[2-methoxy-4-(2-oxidanylidenepyrrolidin-1-yl)phenyl]amino]-4-(methylamino)-7~{H}-pyrrolo[2,3-d]pyrimidine-5-carbonitrile"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
G5C  "Create component"  2020-07-23  PDBJ  
G5C  "Initial release"   2021-05-12  RCSB  
##
