data_E5C
#

_chem_comp.id                                   E5C
_chem_comp.name                                 "(3R)-3-[[(3S)-3-ethylpiperidin-1-yl]methyl]-6,8-bis(oxidanyl)-3,4-dihydroisochromen-1-one"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C17 H23 N O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-10-17
_chem_comp.pdbx_modified_date                   2021-05-14
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       305.369
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    E5C
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6L3Y
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
E5C  N    N1   N  0  1  N  N  N   -5.821  -24.179  -48.635   2.361   0.481  -0.001  N    E5C   1  
E5C  C    C1   C  0  1  Y  N  N   -6.752  -27.871  -43.340  -3.814  -1.178  -0.074  C    E5C   2  
E5C  O    O1   O  0  1  N  N  N   -5.595  -28.520  -43.043  -3.854  -2.533  -0.111  O    E5C   3  
E5C  C1   C2   C  0  1  Y  N  N   -7.787  -27.911  -42.420  -4.982  -0.451   0.089  C1   E5C   4  
E5C  C10  C3   C  0  1  N  N  N   -3.841  -24.392  -50.067   3.549  -0.738   1.761  C10  E5C   5  
E5C  C11  C4   C  0  1  N  N  N   -3.038  -23.569  -49.066   4.887  -0.268   1.182  C11  E5C   6  
E5C  C12  C5   C  0  1  N  N  S   -3.930  -22.667  -48.221   4.732  -0.045  -0.324  C12  E5C   7  
E5C  C13  C6   C  0  1  N  N  N   -3.136  -21.924  -47.142   6.047   0.483  -0.901  C13  E5C   8  
E5C  C14  C7   C  0  1  N  N  N   -3.971  -21.024  -46.257   7.131  -0.588  -0.760  C14  E5C   9  
E5C  C15  C8   C  0  1  Y  N  N   -6.894  -27.174  -44.559  -2.591  -0.504  -0.196  C15  E5C  10  
E5C  C16  C9   C  0  1  N  N  N   -5.789  -27.118  -45.507  -1.335  -1.262  -0.356  C16  E5C  11  
E5C  C2   C10  C  0  1  Y  N  N   -8.978  -27.257  -42.698  -4.934   0.935   0.126  C2   E5C  12  
E5C  C3   C11  C  0  1  Y  N  N   -9.141  -26.570  -43.891  -3.720   1.603  -0.003  C3   E5C  13  
E5C  C4   C12  C  0  1  Y  N  N   -8.113  -26.523  -44.828  -2.551   0.893  -0.162  C4   E5C  14  
E5C  C5   C13  C  0  1  N  N  N   -8.273  -25.815  -46.151  -1.243   1.625  -0.305  C5   E5C  15  
E5C  C6   C14  C  0  1  N  N  R   -6.937  -25.322  -46.658  -0.077   0.702   0.052  C6   E5C  16  
E5C  C7   C15  C  0  1  N  N  N   -7.018  -24.839  -48.097   1.242   1.370  -0.340  C7   E5C  17  
E5C  C8   C16  C  0  1  N  N  N   -5.035  -23.511  -47.598   3.620   0.977  -0.572  C8   E5C  18  
E5C  C9   C17  C  0  1  N  N  N   -4.972  -25.118  -49.375   2.471   0.304   1.453  C9   E5C  19  
E5C  O1   O2   O  0  1  N  N  N   -9.997  -27.291  -41.791  -6.080   1.645   0.288  O1   E5C  20  
E5C  O2   O3   O  0  1  N  N  N   -5.961  -26.414  -46.644  -0.220  -0.555  -0.672  O2   E5C  21  
E5C  O3   O4   O  0  1  N  N  N   -4.728  -27.667  -45.347  -1.301  -2.469  -0.213  O3   E5C  22  
E5C  H2   H2   H  0  1  N  N  N   -4.976  -28.406  -43.754  -3.971  -2.899  -0.998  H2   E5C  23  
E5C  H3   H3   H  0  1  N  N  N   -7.667  -28.449  -41.491  -5.928  -0.962   0.188  H3   E5C  24  
E5C  H4   H4   H  0  1  N  N  N   -3.177  -25.128  -50.544   3.273  -1.691   1.311  H4   E5C  25  
E5C  H5   H5   H  0  1  N  N  N   -4.257  -23.722  -50.834   3.641  -0.857   2.841  H5   E5C  26  
E5C  H6   H6   H  0  1  N  N  N   -2.493  -24.254  -48.400   5.182   0.666   1.660  H6   E5C  27  
E5C  H7   H7   H  0  1  N  N  N   -2.320  -22.943  -49.616   5.648  -1.026   1.362  H7   E5C  28  
E5C  H8   H8   H  0  1  N  N  N   -4.395  -21.921  -48.883   4.474  -0.987  -0.807  H8   E5C  29  
E5C  H9   H9   H  0  1  N  N  N   -2.642  -22.671  -46.504   5.911   0.725  -1.955  H9   E5C  30  
E5C  H10  H10  H  0  1  N  N  N   -2.375  -21.306  -47.640   6.349   1.379  -0.358  H10  E5C  31  
E5C  H11  H11  H  0  1  N  N  N   -3.323  -20.534  -45.516   7.268  -0.830   0.294  H11  E5C  32  
E5C  H12  H12  H  0  1  N  N  N   -4.465  -20.259  -46.874   6.830  -1.484  -1.303  H12  E5C  33  
E5C  H13  H13  H  0  1  N  N  N   -4.732  -21.625  -45.738   8.069  -0.212  -1.170  H13  E5C  34  
E5C  H14  H14  H  0  1  N  N  N  -10.074  -26.067  -44.095  -3.694   2.682   0.026  H14  E5C  35  
E5C  H15  H15  H  0  1  N  N  N   -8.949  -24.957  -46.022  -1.131   1.966  -1.334  H15  E5C  36  
E5C  H16  H16  H  0  1  N  N  N   -8.702  -26.513  -46.885  -1.236   2.486   0.363  H16  E5C  37  
E5C  H17  H17  H  0  1  N  N  N   -6.587  -24.498  -46.019  -0.083   0.507   1.124  H17  E5C  38  
E5C  H18  H18  H  0  1  N  N  N   -7.852  -24.125  -48.163   1.348   2.310   0.201  H18  E5C  39  
E5C  H19  H19  H  0  1  N  N  N   -7.232  -25.712  -48.731   1.246   1.566  -1.412  H19  E5C  40  
E5C  H20  H20  H  0  1  N  N  N   -5.696  -22.861  -47.006   3.497   1.127  -1.645  H20  E5C  41  
E5C  H21  H21  H  0  1  N  N  N   -4.584  -24.270  -46.942   3.884   1.923  -0.101  H21  E5C  42  
E5C  H22  H22  H  0  1  N  N  N   -5.582  -25.637  -50.129   2.741   1.254   1.914  H22  E5C  43  
E5C  H23  H23  H  0  1  N  N  N   -4.552  -25.854  -48.673   1.515  -0.034   1.851  H23  E5C  44  
E5C  H24  H24  H  0  1  N  N  N   -9.730  -27.797  -41.033  -6.304   1.823   1.212  H24  E5C  45  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
E5C  C10  C9   SING  N  N   1  
E5C  C10  C11  SING  N  N   2  
E5C  C9   N    SING  N  N   3  
E5C  C11  C12  SING  N  N   4  
E5C  N    C7   SING  N  N   5  
E5C  N    C8   SING  N  N   6  
E5C  C12  C8   SING  N  N   7  
E5C  C12  C13  SING  N  N   8  
E5C  C7   C6   SING  N  N   9  
E5C  C13  C14  SING  N  N  10  
E5C  C6   O2   SING  N  N  11  
E5C  C6   C5   SING  N  N  12  
E5C  O2   C16  SING  N  N  13  
E5C  C5   C4   SING  N  N  14  
E5C  C16  O3   DOUB  N  N  15  
E5C  C16  C15  SING  N  N  16  
E5C  C4   C15  DOUB  Y  N  17  
E5C  C4   C3   SING  Y  N  18  
E5C  C15  C    SING  Y  N  19  
E5C  C3   C2   DOUB  Y  N  20  
E5C  C    O    SING  N  N  21  
E5C  C    C1   DOUB  Y  N  22  
E5C  C2   C1   SING  Y  N  23  
E5C  C2   O1   SING  N  N  24  
E5C  O    H2   SING  N  N  25  
E5C  C1   H3   SING  N  N  26  
E5C  C10  H4   SING  N  N  27  
E5C  C10  H5   SING  N  N  28  
E5C  C11  H6   SING  N  N  29  
E5C  C11  H7   SING  N  N  30  
E5C  C12  H8   SING  N  N  31  
E5C  C13  H9   SING  N  N  32  
E5C  C13  H10  SING  N  N  33  
E5C  C14  H11  SING  N  N  34  
E5C  C14  H12  SING  N  N  35  
E5C  C14  H13  SING  N  N  36  
E5C  C3   H14  SING  N  N  37  
E5C  C5   H15  SING  N  N  38  
E5C  C5   H16  SING  N  N  39  
E5C  C6   H17  SING  N  N  40  
E5C  C7   H18  SING  N  N  41  
E5C  C7   H19  SING  N  N  42  
E5C  C8   H20  SING  N  N  43  
E5C  C8   H21  SING  N  N  44  
E5C  C9   H22  SING  N  N  45  
E5C  C9   H23  SING  N  N  46  
E5C  O1   H24  SING  N  N  47  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
E5C  InChI             InChI                 1.03   "InChI=1S/C17H23NO4/c1-2-11-4-3-5-18(9-11)10-14-7-12-6-13(19)8-15(20)16(12)17(21)22-14/h6,8,11,14,19-20H,2-5,7,9-10H2,1H3/t11-,14+/m0/s1"  
E5C  InChIKey          InChI                 1.03   PVQQYHLNENIZDV-SMDDNHRTSA-N  
E5C  SMILES_CANONICAL  CACTVS                3.385  "CC[C@H]1CCCN(C1)C[C@H]2Cc3cc(O)cc(O)c3C(=O)O2"  
E5C  SMILES            CACTVS                3.385  "CC[CH]1CCCN(C1)C[CH]2Cc3cc(O)cc(O)c3C(=O)O2"  
E5C  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC[C@H]1CCCN(C1)C[C@H]2Cc3cc(cc(c3C(=O)O2)O)O"  
E5C  SMILES            "OpenEye OEToolkits"  2.0.7  "CCC1CCCN(C1)CC2Cc3cc(cc(c3C(=O)O2)O)O"  
#
_pdbx_chem_comp_identifier.comp_id          E5C
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(3~{R})-3-[[(3~{S})-3-ethylpiperidin-1-yl]methyl]-6,8-bis(oxidanyl)-3,4-dihydroisochromen-1-one"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
E5C  "Create component"  2019-10-17  PDBJ  
E5C  "Initial release"   2021-05-19  RCSB  
##
