data_A1AHC
# 
_chem_comp.id                                    A1AHC 
_chem_comp.name                                  "4-nitrophenyl 2-amino-2-deoxy-alpha-D-galactopyranoside" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H16 N2 O7" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-03-06 
_chem_comp.pdbx_modified_date                    2024-12-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        300.265 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1AHC 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        9AWT 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1AHC C4    C1  C 0  1 N N R N N N 63.250 -4.135  31.931 3.346  -0.701 -0.589 C4    A1AHC 1  
A1AHC C5    C2  C 0  1 N N R N N N 63.838 -5.512  31.589 1.927  -1.250 -0.420 C5    A1AHC 2  
A1AHC C6    C3  C 0  1 N N N N N N 64.937 -5.907  32.571 1.974  -2.778 -0.368 C6    A1AHC 3  
A1AHC N2    N1  N 0  1 N N N N N N 59.759 -4.691  30.435 2.528  2.766  0.710  N2    A1AHC 4  
A1AHC C2    C4  C 0  1 N N R N N N 60.962 -4.906  31.290 2.646  1.302  0.723  C2    A1AHC 5  
A1AHC C3    C5  C 0  1 N N R N N N 62.010 -3.802  31.067 3.299  0.830  -0.580 C3    A1AHC 6  
A1AHC O3    O1  O 0  1 N N N N N N 61.395 -2.510  31.388 4.627  1.350  -0.665 O3    A1AHC 7  
A1AHC O4    O2  O 0  1 N N N N N N 62.934 -4.088  33.358 4.167  -1.160 0.486  O4    A1AHC 8  
A1AHC O6    O3  O 0  1 N N N N N N 65.452 -7.208  32.289 0.642  -3.294 -0.326 O6    A1AHC 9  
A1AHC O5    O4  O 0  1 N N N N N N 62.824 -6.517  31.750 1.366  -0.749 0.796  O5    A1AHC 10 
A1AHC C1    C6  C 0  1 N N R N N N 61.594 -6.302  30.998 1.252  0.675  0.843  C1    A1AHC 11 
A1AHC O1    O5  O 0  1 N N N N N N 61.777 -6.504  29.576 0.433  1.122  -0.240 O1    A1AHC 12 
A1AHC "C1'" C7  C 0  1 Y N N N N N 62.089 -7.722  29.058 -0.892 0.829  -0.172 "C1'" A1AHC 13 
A1AHC "C2'" C8  C 0  1 Y N N N N N 63.368 -8.029  28.559 -1.745 1.234  -1.189 "C2'" A1AHC 14 
A1AHC "C3'" C9  C 0  1 Y N N N N N 63.617 -9.293  28.019 -3.092 0.934  -1.119 "C3'" A1AHC 15 
A1AHC "C6'" C10 C 0  1 Y N N N N N 61.086 -8.661  29.006 -1.393 0.121  0.910  "C6'" A1AHC 16 
A1AHC "C5'" C11 C 0  1 Y N N N N N 61.316 -9.912  28.467 -2.741 -0.176 0.975  "C5'" A1AHC 17 
A1AHC "C4'" C12 C 0  1 Y N N N N N 62.572 -10.213 27.981 -3.590 0.233  -0.036 "C4'" A1AHC 18 
A1AHC "N1'" N2  N 1  1 N N N N N N 62.764 -11.460 27.453 -5.033 -0.086 0.037  "N1'" A1AHC 19 
A1AHC "O2'" O6  O 0  1 N N N N N N 61.665 -12.265 27.354 -5.781 0.270  -0.856 "O2'" A1AHC 20 
A1AHC "O1'" O7  O -1 1 N N N N N N 64.017 -11.871 27.036 -5.473 -0.704 0.990  "O1'" A1AHC 21 
A1AHC H1    H1  H 0  1 N N N N N N 64.019 -3.379  31.715 3.759  -1.047 -1.537 H1    A1AHC 22 
A1AHC H2    H2  H 0  1 N N N N N N 64.235 -5.505  30.563 1.311  -0.932 -1.262 H2    A1AHC 23 
A1AHC H3    H3  H 0  1 N N N N N N 65.756 -5.176  32.502 2.481  -3.156 -1.256 H3    A1AHC 24 
A1AHC H4    H4  H 0  1 N N N N N N 64.524 -5.900  33.590 2.515  -3.095 0.523  H4    A1AHC 25 
A1AHC H5    H5  H 0  1 N N N N N N 59.365 -3.793  30.633 2.098  3.102  1.559  H5    A1AHC 26 
A1AHC H6    H6  H 0  1 N N N N N N 60.023 -4.734  29.471 3.427  3.201  0.564  H6    A1AHC 27 
A1AHC H8    H8  H 0  1 N N N N N N 60.657 -4.884  32.347 3.259  0.994  1.570  H8    A1AHC 28 
A1AHC H9    H9  H 0  1 N N N N N N 62.310 -3.813  30.009 2.713  1.182  -1.429 H9    A1AHC 29 
A1AHC H10   H10 H 0  1 N N N N N N 62.029 -1.815  31.256 5.101  1.090  -1.467 H10   A1AHC 30 
A1AHC H11   H11 H 0  1 N N N N N N 63.712 -4.296  33.862 4.240  -2.122 0.542  H11   A1AHC 31 
A1AHC H12   H12 H 0  1 N N N N N N 66.132 -7.423  32.917 0.595  -4.259 -0.292 H12   A1AHC 32 
A1AHC H13   H13 H 0  1 N N N N N N 60.863 -7.047  31.345 0.800  0.973  1.789  H13   A1AHC 33 
A1AHC H14   H14 H 0  1 N N N N N N 64.155 -7.290  28.593 -1.357 1.782  -2.034 H14   A1AHC 34 
A1AHC H15   H15 H 0  1 N N N N N N 64.595 -9.550  27.640 -3.757 1.248  -1.910 H15   A1AHC 35 
A1AHC H16   H16 H 0  1 N N N N N N 60.107 -8.418  29.391 -0.730 -0.199 1.700  H16   A1AHC 36 
A1AHC H17   H17 H 0  1 N N N N N N 60.523 -10.645 28.427 -3.131 -0.728 1.818  H17   A1AHC 37 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1AHC "O1'" "N1'" SING N N 1  
A1AHC "O2'" "N1'" DOUB N N 2  
A1AHC "N1'" "C4'" SING N N 3  
A1AHC "C4'" "C3'" DOUB Y N 4  
A1AHC "C4'" "C5'" SING Y N 5  
A1AHC "C3'" "C2'" SING Y N 6  
A1AHC "C5'" "C6'" DOUB Y N 7  
A1AHC "C2'" "C1'" DOUB Y N 8  
A1AHC "C6'" "C1'" SING Y N 9  
A1AHC "C1'" O1    SING N N 10 
A1AHC O1    C1    SING N N 11 
A1AHC N2    C2    SING N N 12 
A1AHC C1    C2    SING N N 13 
A1AHC C1    O5    SING N N 14 
A1AHC C3    C2    SING N N 15 
A1AHC C3    O3    SING N N 16 
A1AHC C3    C4    SING N N 17 
A1AHC C5    O5    SING N N 18 
A1AHC C5    C4    SING N N 19 
A1AHC C5    C6    SING N N 20 
A1AHC C4    O4    SING N N 21 
A1AHC O6    C6    SING N N 22 
A1AHC C4    H1    SING N N 23 
A1AHC C5    H2    SING N N 24 
A1AHC C6    H3    SING N N 25 
A1AHC C6    H4    SING N N 26 
A1AHC N2    H5    SING N N 27 
A1AHC N2    H6    SING N N 28 
A1AHC C2    H8    SING N N 29 
A1AHC C3    H9    SING N N 30 
A1AHC O3    H10   SING N N 31 
A1AHC O4    H11   SING N N 32 
A1AHC O6    H12   SING N N 33 
A1AHC C1    H13   SING N N 34 
A1AHC "C2'" H14   SING N N 35 
A1AHC "C3'" H15   SING N N 36 
A1AHC "C6'" H16   SING N N 37 
A1AHC "C5'" H17   SING N N 38 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1AHC SMILES           ACDLabs              12.01 "[O-][N+](=O)c1ccc(cc1)OC1OC(CO)C(O)C(O)C1N"                                                                                      
A1AHC InChI            InChI                1.06  "InChI=1S/C12H16N2O7/c13-9-11(17)10(16)8(5-15)21-12(9)20-7-3-1-6(2-4-7)14(18)19/h1-4,8-12,15-17H,5,13H2/t8-,9-,10+,11-,12+/m1/s1" 
A1AHC InChIKey         InChI                1.06  ZRNBGANFPXCMFT-ZIQFBCGOSA-N                                                                                                       
A1AHC SMILES_CANONICAL CACTVS               3.385 "N[C@@H]1[C@@H](O)[C@@H](O)[C@@H](CO)O[C@@H]1Oc2ccc(cc2)[N+]([O-])=O"                                                             
A1AHC SMILES           CACTVS               3.385 "N[CH]1[CH](O)[CH](O)[CH](CO)O[CH]1Oc2ccc(cc2)[N+]([O-])=O"                                                                       
A1AHC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1[N+](=O)[O-])O[C@@H]2[C@@H]([C@H]([C@H]([C@H](O2)CO)O)O)N"                                                              
A1AHC SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1[N+](=O)[O-])OC2C(C(C(C(O2)CO)O)O)N"                                                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A1AHC "SYSTEMATIC NAME" ACDLabs              12.01 "4-nitrophenyl 2-amino-2-deoxy-alpha-D-galactopyranoside"                                     
A1AHC "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R},3~{R},4~{R},5~{R},6~{R})-5-azanyl-2-(hydroxymethyl)-6-(4-nitrophenoxy)oxane-3,4-diol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1AHC "Create component" 2024-03-06 RCSB 
A1AHC "Initial release"  2024-12-18 RCSB 
# 
