data_3UC
# 
_chem_comp.id                                    3UC 
_chem_comp.name                                  
"[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (2R,5S,6R)-3,3,4,4-tetrafluoro-5-hydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl dihydrogen diphosphate (non-preferred name)" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C15 H20 F4 N2 O15 P2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-10-31 
_chem_comp.pdbx_modified_date                    2015-01-16 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        606.265 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     3UC 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4RPL 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
3UC "F2''" "F2''" F 0 0 N N N 34.778 -2.414 17.180 -6.862 0.332  -1.336 "F2''" 3UC 1  
3UC "C2'"  "C2'"  C 0 1 N N N 33.488 -1.934 17.379 -5.465 0.267  -1.391 "C2'"  3UC 2  
3UC "F2'"  "F2'"  F 0 1 N N N 33.829 -1.042 18.435 -5.075 -0.431 -2.538 "F2'"  3UC 3  
3UC "C3'"  "C3'"  C 0 1 N N N 33.335 -1.219 16.110 -4.888 1.686  -1.433 "C3'"  3UC 4  
3UC "F3''" "F3''" F 0 0 N N N 33.999 -0.363 15.848 -5.421 2.376  -2.527 "F3''" 3UC 5  
3UC "F3'"  "F3'"  F 0 1 N N N 32.173 -0.352 16.179 -3.496 1.622  -1.552 "F3'"  3UC 6  
3UC "C4'"  "C4'"  C 0 1 N N S 33.224 -2.196 15.069 -5.259 2.414  -0.137 "C4'"  3UC 7  
3UC "O4'"  "O4'"  O 0 1 N N N 34.310 -3.141 15.139 -6.680 2.537  -0.047 "O4'"  3UC 8  
3UC "C5'"  "C5'"  C 0 1 N N R 31.961 -2.971 15.205 -4.738 1.610  1.058  "C5'"  3UC 9  
3UC "C6'"  "C6'"  C 0 1 N N N 32.049 -4.136 14.314 -5.156 2.299  2.358  "C6'"  3UC 10 
3UC "O6'"  "O6'"  O 0 1 N N N 31.518 -3.983 13.032 -4.573 1.615  3.469  "O6'"  3UC 11 
3UC "O5'"  "O5'"  O 0 1 N N N 31.671 -3.443 16.611 -5.289 0.292  1.019  "O5'"  3UC 12 
3UC "C1'"  "C1'"  C 0 1 N N R 32.241 -2.745 17.693 -4.937 -0.454 -0.148 "C1'"  3UC 13 
3UC O3B    O3B    O 0 1 N N N 31.318 -1.864 18.220 -3.515 -0.566 -0.231 O3B    3UC 14 
3UC PB     PB     P 0 1 N N N 30.734 -2.144 19.561 -2.691 -1.780 0.433  PB     3UC 15 
3UC O1B    O1B    O 0 1 N N N 31.044 -3.532 19.903 -3.019 -1.869 1.873  O1B    3UC 16 
3UC O2B    O2B    O 0 1 N N N 31.235 -1.188 20.591 -3.089 -3.160 -0.294 O2B    3UC 17 
3UC O3A    O3A    O 0 1 N N N 29.206 -2.046 19.385 -1.113 -1.517 0.257  O3A    3UC 18 
3UC PA     PA     P 0 1 N N N 28.568 -1.120 18.240 0.208  -2.147 0.928  PA     3UC 19 
3UC O1A    O1A    O 0 1 N N N 29.272 0.252  18.266 0.372  -1.578 2.426  O1A    3UC 20 
3UC O2A    O2A    O 0 1 N N N 28.665 -1.788 16.866 0.084  -3.621 0.972  O2A    3UC 21 
3UC O5D    O5D    O 0 1 N N N 27.046 -0.924 18.675 1.499  -1.742 0.056  O5D    3UC 22 
3UC C5D    C5D    C 0 1 N N N 26.789 -0.275 19.877 2.812  -2.234 0.334  C5D    3UC 23 
3UC C4D    C4D    C 0 1 N N R 25.539 -0.665 20.522 3.799  -1.655 -0.681 C4D    3UC 24 
3UC C3D    C3D    C 0 1 N N S 25.607 -2.087 20.844 5.202  -2.270 -0.479 C3D    3UC 25 
3UC O3D    O3D    O 0 1 N N N 26.120 -2.298 22.139 5.423  -3.329 -1.412 O3D    3UC 26 
3UC C2D    C2D    C 0 1 N N R 24.257 -2.534 20.721 6.169  -1.096 -0.752 C2D    3UC 27 
3UC O2D    O2D    O 0 1 N N N 23.575 -2.411 21.930 7.018  -1.395 -1.862 O2D    3UC 28 
3UC O4D    O4D    O 0 1 N N N 24.491 -0.552 19.553 3.980  -0.240 -0.455 O4D    3UC 29 
3UC C1D    C1D    C 0 1 N N R 23.667 -1.638 19.688 5.236  0.089  -1.087 C1D    3UC 30 
3UC N1     N1     N 0 1 N N N 23.501 -2.419 18.417 5.775  1.334  -0.535 N1     3UC 31 
3UC C6     C6     C 0 1 N N N 24.512 -2.544 17.534 6.116  2.357  -1.377 C6     3UC 32 
3UC C5     C5     C 0 1 N N N 24.320 -3.278 16.363 6.613  3.505  -0.867 C5     3UC 33 
3UC C4     C4     C 0 1 N N N 23.088 -3.866 16.134 6.770  3.625  0.535  C4     3UC 34 
3UC O4     O4     O 0 1 N N N 22.874 -4.573 15.028 7.215  4.651  1.018  O4     3UC 35 
3UC N3     N3     N 0 1 N N N 22.115 -3.722 17.025 6.422  2.593  1.330  N3     3UC 36 
3UC C2     C2     C 0 1 N N N 22.334 -3.003 18.152 5.925  1.462  0.796  C2     3UC 37 
3UC O2     O2     O 0 1 N N N 21.436 -2.881 18.956 5.615  0.540  1.526  O2     3UC 38 
3UC H1     H1     H 0 1 N N N 33.233 -1.697 14.089 -4.806 3.405  -0.134 H1     3UC 39 
3UC H2     H2     H 0 1 N N N 35.137 -2.681 15.055 -7.078 3.036  -0.773 H2     3UC 40 
3UC H3     H3     H 0 1 N N N 31.125 -2.337 14.876 -3.651 1.551  1.010  H3     3UC 41 
3UC H4     H4     H 0 1 N N N 31.517 -4.968 14.799 -4.812 3.333  2.348  H4     3UC 42 
3UC H5     H5     H 0 1 N N N 33.113 -4.394 14.206 -6.242 2.278  2.448  H5     3UC 43 
3UC H6     H6     H 0 1 N N N 31.628 -4.791 12.545 -4.796 1.998  4.328  H6     3UC 44 
3UC H7     H7     H 0 1 N N N 32.518 -3.474 18.469 -5.378 -1.449 -0.091 H7     3UC 45 
3UC H8     H8     H 0 1 N N N 31.668 -1.669 21.286 -2.902 -3.173 -1.243 H8     3UC 46 
3UC H9     H9     H 0 1 N N N 29.643 0.434  17.411 0.459  -0.616 2.474  H9     3UC 47 
3UC H10    H10    H 0 1 N N N 27.615 -0.494 20.569 3.107  -1.935 1.339  H10    3UC 48 
3UC H11    H11    H 0 1 N N N 26.752 0.807  19.682 2.814  -3.322 0.263  H11    3UC 49 
3UC H12    H12    H 0 1 N N N 25.340 -0.057 21.417 3.448  -1.836 -1.697 H12    3UC 50 
3UC H13    H13    H 0 1 N N N 26.237 -2.598 20.101 5.316  -2.632 0.543  H13    3UC 51 
3UC H14    H14    H 0 1 N N N 26.152 -3.230 22.319 6.289  -3.751 -1.329 H14    3UC 52 
3UC H15    H15    H 0 1 N N N 24.231 -3.573 20.362 6.764  -0.878 0.135  H15    3UC 53 
3UC H16    H16    H 0 1 N N N 23.966 -2.989 22.575 7.582  -2.169 -1.728 H16    3UC 54 
3UC H17    H17    H 0 1 N N N 22.672 -1.319 20.031 5.107  0.176  -2.166 H17    3UC 55 
3UC H18    H18    H 0 1 N N N 25.466 -2.078 17.732 5.990  2.247  -2.443 H18    3UC 56 
3UC H19    H19    H 0 1 N N N 25.121 -3.386 15.646 6.886  4.320  -1.520 H19    3UC 57 
3UC H20    H20    H 0 1 N N N 21.222 -4.143 16.865 6.527  2.668  2.292  H20    3UC 58 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
3UC "O6'"  "C6'" SING N N 1  
3UC "C6'"  "C5'" SING N N 2  
3UC O4     C4    DOUB N N 3  
3UC "C4'"  "O4'" SING N N 4  
3UC "C4'"  "C5'" SING N N 5  
3UC "C4'"  "C3'" SING N N 6  
3UC "C5'"  "O5'" SING N N 7  
3UC "F3''" "C3'" SING N N 8  
3UC "C3'"  "F3'" SING N N 9  
3UC "C3'"  "C2'" SING N N 10 
3UC C4     C5    SING N N 11 
3UC C4     N3    SING N N 12 
3UC C5     C6    DOUB N N 13 
3UC "O5'"  "C1'" SING N N 14 
3UC O2A    PA    DOUB N N 15 
3UC N3     C2    SING N N 16 
3UC "F2''" "C2'" SING N N 17 
3UC "C2'"  "C1'" SING N N 18 
3UC "C2'"  "F2'" SING N N 19 
3UC C6     N1    SING N N 20 
3UC "C1'"  O3B   SING N N 21 
3UC C2     N1    SING N N 22 
3UC C2     O2    DOUB N N 23 
3UC O3B    PB    SING N N 24 
3UC PA     O1A   SING N N 25 
3UC PA     O5D   SING N N 26 
3UC PA     O3A   SING N N 27 
3UC N1     C1D   SING N N 28 
3UC O5D    C5D   SING N N 29 
3UC O3A    PB    SING N N 30 
3UC O4D    C1D   SING N N 31 
3UC O4D    C4D   SING N N 32 
3UC PB     O1B   DOUB N N 33 
3UC PB     O2B   SING N N 34 
3UC C1D    C2D   SING N N 35 
3UC C5D    C4D   SING N N 36 
3UC C4D    C3D   SING N N 37 
3UC C2D    C3D   SING N N 38 
3UC C2D    O2D   SING N N 39 
3UC C3D    O3D   SING N N 40 
3UC "C4'"  H1    SING N N 41 
3UC "O4'"  H2    SING N N 42 
3UC "C5'"  H3    SING N N 43 
3UC "C6'"  H4    SING N N 44 
3UC "C6'"  H5    SING N N 45 
3UC "O6'"  H6    SING N N 46 
3UC "C1'"  H7    SING N N 47 
3UC O2B    H8    SING N N 48 
3UC O1A    H9    SING N N 49 
3UC C5D    H10   SING N N 50 
3UC C5D    H11   SING N N 51 
3UC C4D    H12   SING N N 52 
3UC C3D    H13   SING N N 53 
3UC O3D    H14   SING N N 54 
3UC C2D    H15   SING N N 55 
3UC O2D    H16   SING N N 56 
3UC C1D    H17   SING N N 57 
3UC C6     H18   SING N N 58 
3UC C5     H19   SING N N 59 
3UC N3     H20   SING N N 60 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
3UC SMILES           ACDLabs              12.01 "O=C1C=CN(C(=O)N1)C2OC(C(O)C2O)COP(=O)(OP(=O)(OC3OC(C(O)C(F)(F)C3(F)F)CO)O)O" 
3UC InChI            InChI                1.03  
"InChI=1S/C15H20F4N2O15P2/c16-14(17)10(26)5(3-22)34-12(15(14,18)19)35-38(30,31)36-37(28,29)32-4-6-8(24)9(25)11(33-6)21-2-1-7(23)20-13(21)27/h1-2,5-6,8-12,22,24-26H,3-4H2,(H,28,29)(H,30,31)(H,20,23,27)/t5-,6-,8-,9-,10+,11-,12-/m1/s1" 
3UC InChIKey         InChI                1.03  MUYRTPUNBLMMOR-UMEAPJPCSA-N 
3UC SMILES_CANONICAL CACTVS               3.385 "OC[C@H]1O[C@H](O[P](O)(=O)O[P](O)(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)N3C=CC(=O)NC3=O)C(F)(F)C(F)(F)[C@H]1O" 
3UC SMILES           CACTVS               3.385 "OC[CH]1O[CH](O[P](O)(=O)O[P](O)(=O)OC[CH]2O[CH]([CH](O)[CH]2O)N3C=CC(=O)NC3=O)C(F)(F)C(F)(F)[CH]1O" 
3UC SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C1=CN(C(=O)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)OP(=O)(O)O[C@@H]3C(C([C@H]([C@H](O3)CO)O)(F)F)(F)F)O)O" 
3UC SMILES           "OpenEye OEToolkits" 1.7.6 "C1=CN(C(=O)NC1=O)C2C(C(C(O2)COP(=O)(O)OP(=O)(O)OC3C(C(C(C(O3)CO)O)(F)F)(F)F)O)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
3UC "SYSTEMATIC NAME" ACDLabs              12.01 
"[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (2R,5S,6R)-3,3,4,4-tetrafluoro-5-hydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl dihydrogen diphosphate (non-preferred name)" 
3UC "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 
"[[(2R,3S,4R,5R)-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2R,5S,6R)-3,3,4,4-tetrakis(fluoranyl)-6-(hydroxymethyl)-5-oxidanyl-oxan-2-yl] hydrogen phosphate"              
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
3UC "Create component" 2014-10-31 RCSB 
3UC "Initial release"  2015-01-21 RCSB 
# 
