data_Y2B
# 
_chem_comp.id                                    Y2B 
_chem_comp.name                                  "6-{[(3R,4R)-4-(2-{[(1S,2R)-2-(3-fluorophenyl)cyclopropyl]amino}ethoxy)pyrrolidin-3-yl]methyl}-4-methylpyridin-2-amine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H29 F N4 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-04-29 
_chem_comp.pdbx_modified_date                    2012-04-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        384.490 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Y2B 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3RQJ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Y2B N01    N01    N 0 1 Y N N 17.144 8.521  55.398 -5.281 0.295  -1.010 N01    Y2B 1  
Y2B C02    C02    C 0 1 Y N N 16.935 9.766  54.865 -6.448 0.918  -0.971 C02    Y2B 2  
Y2B N02    N02    N 0 1 N N N 15.702 10.358 54.927 -7.464 0.535  -1.840 N02    Y2B 3  
Y2B C03    C03    C 0 1 Y N N 18.008 10.412 54.237 -6.668 1.954  -0.068 C03    Y2B 4  
Y2B C04    C04    C 0 1 Y N N 19.263 9.784  54.158 -5.649 2.324  0.790  C04    Y2B 5  
Y2B C05    C05    C 0 1 Y N N 19.442 8.515  54.720 -4.440 1.645  0.717  C05    Y2B 6  
Y2B C06    C06    C 0 1 Y N N 18.353 7.893  55.330 -4.291 0.627  -0.203 C06    Y2B 7  
Y2B C07    C07    C 0 1 N N N 20.423 10.470 53.483 -5.846 3.441  1.783  C07    Y2B 8  
Y2B C08    C08    C 0 1 N N N 18.501 6.511  55.926 -2.982 -0.113 -0.288 C08    Y2B 9  
Y2B O09    O09    O 0 1 N N N 18.196 3.709  56.237 -0.825 -1.499 -0.500 O09    Y2B 10 
Y2B "N1'"  "N1'"  N 0 1 N N N 17.624 3.811  53.467 -3.101 -3.218 1.651  "N1'"  Y2B 11 
Y2B C10    C10    C 0 1 N N N 18.437 2.466  56.910 0.235  -2.061 -1.276 C10    Y2B 12 
Y2B C11    C11    C 0 1 N N N 17.326 2.309  57.949 1.337  -1.017 -1.468 C11    Y2B 13 
Y2B N12    N12    N 0 1 N N N 16.096 1.666  57.503 1.937  -0.695 -0.166 N12    Y2B 14 
Y2B C13    C13    C 0 1 N N S 15.031 1.451  58.483 3.002  0.307  -0.312 C13    Y2B 15 
Y2B C14    C14    C 0 1 N N R 13.738 1.013  57.800 4.093  0.338  0.760  C14    Y2B 16 
Y2B C15    C15    C 0 1 N N N 13.990 2.491  58.052 3.041  1.449  0.706  C15    Y2B 17 
Y2B "C2'"  "C2'"  C 0 1 N N N 17.373 5.144  54.028 -3.737 -1.922 1.300  "C2'"  Y2B 18 
Y2B C21    C21    C 0 1 Y N N 12.565 0.555  58.610 5.492  0.684  0.318  C21    Y2B 19 
Y2B C22    C22    C 0 1 Y N N 12.064 1.250  59.715 6.520  -0.220 0.511  C22    Y2B 20 
Y2B C23    C23    C 0 1 Y N N 10.953 0.771  60.412 7.805  0.098  0.105  C23    Y2B 21 
Y2B F23    F23    F 0 1 N N N 10.500 1.455  61.501 8.811  -0.785 0.292  F23    Y2B 22 
Y2B C24    C24    C 0 1 Y N N 10.332 -0.419 60.025 8.059  1.320  -0.494 C24    Y2B 23 
Y2B C25    C25    C 0 1 Y N N 10.801 -1.112 58.891 7.030  2.222  -0.685 C25    Y2B 24 
Y2B C26    C26    C 0 1 Y N N 11.909 -0.613 58.218 5.746  1.902  -0.285 C26    Y2B 25 
Y2B "C3'"  "C3'"  C 0 1 N N R 18.671 5.472  54.804 -3.233 -1.614 -0.126 "C3'"  Y2B 26 
Y2B "C4'"  "C4'"  C 0 1 N N R 19.141 4.095  55.241 -1.911 -2.397 -0.261 "C4'"  Y2B 27 
Y2B "C5'"  "C5'"  C 0 1 N N N 18.888 3.249  53.977 -1.727 -3.112 1.094  "C5'"  Y2B 28 
Y2B HN02   HN02   H 0 0 N N N 15.062 9.748  55.395 -7.315 -0.187 -2.471 HN02   Y2B 29 
Y2B HN0A   HN0A   H 0 0 N N N 15.771 11.219 55.431 -8.320 0.988  -1.815 HN0A   Y2B 30 
Y2B H03    H03    H 0 1 N N N 17.870 11.395 53.812 -7.621 2.461  -0.038 H03    Y2B 31 
Y2B H05    H05    H 0 1 N N N 20.405 8.027  54.682 -3.625 1.910  1.374  H05    Y2B 32 
Y2B H07    H07    H 0 1 N N N 20.975 11.070 54.221 -6.233 3.033  2.717  H07    Y2B 33 
Y2B H07A   H07A   H 0 0 N N N 21.095 9.714  53.050 -4.892 3.934  1.969  H07A   Y2B 34 
Y2B H07B   H07B   H 0 0 N N N 20.046 11.126 52.685 -6.557 4.163  1.381  H07B   Y2B 35 
Y2B H08    H08    H 0 1 N N N 19.386 6.489  56.579 -2.519 0.075  -1.257 H08    Y2B 36 
Y2B H08A   H08A   H 0 0 N N N 17.602 6.269  56.513 -2.318 0.231  0.505  H08A   Y2B 37 
Y2B "HN1'" "HN1'" H 0 0 N N N 17.680 3.884  52.471 -3.600 -3.990 1.235  "HN1'" Y2B 38 
Y2B H10    H10    H 0 1 N N N 18.414 1.631  56.194 0.643  -2.930 -0.758 H10    Y2B 39 
Y2B H10A   H10A   H 0 0 N N N 19.422 2.479  57.400 -0.150 -2.366 -2.249 H10A   Y2B 40 
Y2B H13    H13    H 0 1 N N N 15.548 1.102  59.389 3.295  0.536  -1.336 H13    Y2B 41 
Y2B H14    H14    H 0 1 N N N 13.571 0.321  56.962 4.022  -0.384 1.573  H14    Y2B 42 
Y2B H15    H15    H 0 1 N N N 14.064 3.338  57.354 3.361  2.429  0.352  H15    Y2B 43 
Y2B H15A   H15A   H 0 0 N N N 13.423 3.229  58.639 2.277  1.457  1.484  H15A   Y2B 44 
Y2B "H2'"  "H2'"  H 0 1 N N N 17.182 5.883  53.236 -4.823 -2.018 1.307  "H2'"  Y2B 45 
Y2B "H2'A" "H2'A" H 0 0 N N N 16.498 5.140  54.694 -3.419 -1.143 1.993  "H2'A" Y2B 46 
Y2B H22    H22    H 0 1 N N N 12.541 2.166  60.032 6.321  -1.173 0.978  H22    Y2B 47 
Y2B H24    H24    H 0 1 N N N 9.498  -0.806 60.591 9.061  1.569  -0.810 H24    Y2B 48 
Y2B H25    H25    H 0 1 N N N 10.309 -2.012 58.552 7.227  3.176  -1.152 H25    Y2B 49 
Y2B H26    H26    H 0 1 N N N 12.278 -1.150 57.357 4.941  2.605  -0.438 H26    Y2B 50 
Y2B "H3'"  "H3'"  H 0 1 N N N 19.425 5.994  54.197 -3.956 -1.958 -0.866 "H3'"  Y2B 51 
Y2B "H4'"  "H4'"  H 0 1 N N N 20.173 4.016  55.613 -1.983 -3.125 -1.069 "H4'"  Y2B 52 
Y2B "H5'"  "H5'"  H 0 1 N N N 18.796 2.178  54.212 -1.094 -2.519 1.755  "H5'"  Y2B 53 
Y2B "H5'A" "H5'A" H 0 0 N N N 19.705 3.348  53.247 -1.299 -4.103 0.946  "H5'A" Y2B 54 
Y2B H27    H27    H 0 1 N N N 15.712 2.248  56.786 1.235  -0.384 0.489  H27    Y2B 55 
Y2B H11    H11    H 0 1 N N N 17.733 1.697  58.768 2.103  -1.416 -2.133 H11    Y2B 56 
Y2B H29    H29    H 0 1 N N N 17.057 3.319  58.291 0.910  -0.115 -1.905 H29    Y2B 57 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Y2B C02   N01    DOUB Y N 1  
Y2B C02   N02    SING N N 2  
Y2B N02   HN02   SING N N 3  
Y2B N02   HN0A   SING N N 4  
Y2B C03   C02    SING Y N 5  
Y2B C03   H03    SING N N 6  
Y2B C04   C03    DOUB Y N 7  
Y2B C04   C05    SING Y N 8  
Y2B C05   C06    DOUB Y N 9  
Y2B C05   H05    SING N N 10 
Y2B C06   N01    SING Y N 11 
Y2B C06   C08    SING N N 12 
Y2B C07   C04    SING N N 13 
Y2B C07   H07    SING N N 14 
Y2B C07   H07A   SING N N 15 
Y2B C07   H07B   SING N N 16 
Y2B C08   H08    SING N N 17 
Y2B C08   H08A   SING N N 18 
Y2B O09   C10    SING N N 19 
Y2B "N1'" "C5'"  SING N N 20 
Y2B "N1'" "C2'"  SING N N 21 
Y2B "N1'" "HN1'" SING N N 22 
Y2B C10   C11    SING N N 23 
Y2B C10   H10    SING N N 24 
Y2B C10   H10A   SING N N 25 
Y2B N12   C11    SING N N 26 
Y2B N12   C13    SING N N 27 
Y2B C13   H13    SING N N 28 
Y2B C14   C13    SING N N 29 
Y2B C14   C15    SING N N 30 
Y2B C14   C21    SING N N 31 
Y2B C14   H14    SING N N 32 
Y2B C15   C13    SING N N 33 
Y2B C15   H15    SING N N 34 
Y2B C15   H15A   SING N N 35 
Y2B "C2'" "C3'"  SING N N 36 
Y2B "C2'" "H2'"  SING N N 37 
Y2B "C2'" "H2'A" SING N N 38 
Y2B C21   C22    SING Y N 39 
Y2B C22   C23    DOUB Y N 40 
Y2B C22   H22    SING N N 41 
Y2B C23   F23    SING N N 42 
Y2B C24   C23    SING Y N 43 
Y2B C24   H24    SING N N 44 
Y2B C25   C24    DOUB Y N 45 
Y2B C25   H25    SING N N 46 
Y2B C26   C21    DOUB Y N 47 
Y2B C26   C25    SING Y N 48 
Y2B C26   H26    SING N N 49 
Y2B "C3'" C08    SING N N 50 
Y2B "C3'" "C4'"  SING N N 51 
Y2B "C3'" "H3'"  SING N N 52 
Y2B "C4'" O09    SING N N 53 
Y2B "C4'" "H4'"  SING N N 54 
Y2B "C5'" "C4'"  SING N N 55 
Y2B "C5'" "H5'"  SING N N 56 
Y2B "C5'" "H5'A" SING N N 57 
Y2B N12   H27    SING N N 58 
Y2B C11   H11    SING N N 59 
Y2B C11   H29    SING N N 60 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Y2B SMILES           ACDLabs              12.01 "Fc1cccc(c1)C4CC4NCCOC2C(CNC2)Cc3nc(N)cc(c3)C"                                                                                                                                           
Y2B SMILES_CANONICAL CACTVS               3.370 "Cc1cc(N)nc(C[C@@H]2CNC[C@@H]2OCCN[C@H]3C[C@@H]3c4cccc(F)c4)c1"                                                                                                                          
Y2B SMILES           CACTVS               3.370 "Cc1cc(N)nc(C[CH]2CNC[CH]2OCCN[CH]3C[CH]3c4cccc(F)c4)c1"                                                                                                                                 
Y2B SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "Cc1cc(nc(c1)N)C[C@@H]2CNC[C@@H]2OCCN[C@H]3C[C@@H]3c4cccc(c4)F"                                                                                                                          
Y2B SMILES           "OpenEye OEToolkits" 1.7.2 "Cc1cc(nc(c1)N)CC2CNCC2OCCNC3CC3c4cccc(c4)F"                                                                                                                                             
Y2B InChI            InChI                1.03  "InChI=1S/C22H29FN4O/c1-14-7-18(27-22(24)8-14)10-16-12-25-13-21(16)28-6-5-26-20-11-19(20)15-3-2-4-17(23)9-15/h2-4,7-9,16,19-21,25-26H,5-6,10-13H2,1H3,(H2,24,27)/t16-,19-,20+,21+/m1/s1" 
Y2B InChIKey         InChI                1.03  OPKCBCPSRYBLIJ-DBOLQNLKSA-N                                                                                                                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
Y2B "SYSTEMATIC NAME" ACDLabs              12.01 "6-{[(3R,4R)-4-(2-{[(1S,2R)-2-(3-fluorophenyl)cyclopropyl]amino}ethoxy)pyrrolidin-3-yl]methyl}-4-methylpyridin-2-amine"  
Y2B "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "6-[[(3R,4R)-4-[2-[[(1S,2R)-2-(3-fluorophenyl)cyclopropyl]amino]ethoxy]pyrrolidin-3-yl]methyl]-4-methyl-pyridin-2-amine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Y2B "Create component"     2011-04-29 RCSB 
Y2B "Modify aromatic_flag" 2011-06-04 RCSB 
Y2B "Modify descriptor"    2011-06-04 RCSB 
# 
