data_O1B
#

_chem_comp.id                                   O1B
_chem_comp.name                                 "(2R,3R,4S)-5-((2-aminoethyl)amino)-2,3,4-trihydroxy-5-oxopentyl dihydrogen phosphate"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C7 H17 N2 O8 P"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-01-20
_chem_comp.pdbx_modified_date                   2020-07-24
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       288.192
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    O1B
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6XUH
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
O1B  O3   O1   O  0  1  N  N  N  39.659  -30.480   2.431  -0.740   0.906   1.844  O3   O1B   1  
O1B  C4   C1   C  0  1  N  N  R  40.013  -31.144   0.223   0.700   0.317  -0.005  C4   O1B   2  
O1B  C5   C2   C  0  1  N  N  R  40.646  -30.443   1.415  -0.693   0.782   0.421  C5   O1B   3  
O1B  O4   O2   O  0  1  N  N  N  39.924  -28.178   1.152  -3.045   0.248   0.259  O4   O1B   4  
O1B  C6   C3   C  0  1  N  N  N  41.073  -29.034   1.093  -1.735  -0.242  -0.036  C6   O1B   5  
O1B  N1   N1   N  0  1  N  N  N  39.164  -34.233  -0.992   3.679  -0.194   0.352  N1   O1B   6  
O1B  O5   O3   O  0  1  N  N  N  38.812  -26.351  -0.056  -4.530  -0.718  -1.684  O5   O1B   7  
O1B  O6   O4   O  0  1  N  N  N  41.010  -27.349  -0.943  -4.312  -1.919   0.525  O6   O1B   8  
O1B  O7   O5   O  0  1  N  N  N  40.859  -25.860   1.157  -5.663   0.213   0.499  O7   O1B   9  
O1B  P    P1   P  0  1  N  N  N  40.193  -26.834   0.337  -4.386  -0.574  -0.087  P    O1B  10  
O1B  O2   O6   O  0  1  N  N  N  40.991  -31.320  -0.786   0.747   0.192  -1.428  O2   O1B  11  
O1B  C3   C4   C  0  1  N  N  S  39.599  -32.536   0.694   1.742   1.340   0.452  C3   O1B  12  
O1B  O1   O7   O  0  1  N  N  N  40.747  -33.329   0.924   1.393   2.631  -0.052  O1   O1B  13  
O1B  C2   C5   C  0  1  N  N  N  38.798  -33.056  -0.482   3.098   0.945  -0.073  C2   O1B  14  
O1B  O    O8   O  0  1  N  N  N  37.888  -32.366  -0.939   3.667   1.653  -0.877  O    O1B  15  
O1B  C1   C6   C  0  1  N  N  N  39.199  -34.477  -2.424   4.998  -0.578  -0.159  C1   O1B  16  
O1B  C    C7   C  0  1  N  N  N  37.867  -34.107  -3.135   5.425  -1.902   0.478  C    O1B  17  
O1B  N    N2   N  0  1  N  N  N  38.048  -34.386  -4.521   6.747  -2.287  -0.033  N    O1B  18  
O1B  H1   H1   H  0  1  N  N  N  39.992  -30.055   3.212  -0.557   0.083   2.317  H1   O1B  19  
O1B  H2   H2   H  0  1  N  N  N  39.139  -30.582  -0.138   0.916  -0.650   0.452  H2   O1B  20  
O1B  H3   H3   H  0  1  N  N  N  41.530  -31.017   1.729  -0.909   1.748  -0.035  H3   O1B  21  
O1B  H4   H4   H  0  1  N  N  N  41.507  -29.001   0.083  -1.640  -0.402  -1.110  H4   O1B  22  
O1B  H5   H5   H  0  1  N  N  N  41.822  -28.698   1.825  -1.573  -1.184   0.488  H5   O1B  23  
O1B  H6   H6   H  0  1  N  N  N  39.423  -34.971  -0.369   3.224  -0.761   0.994  H6   O1B  24  
O1B  H7   H7   H  0  1  N  N  N  38.697  -26.448  -0.994  -4.584   0.126  -2.152  H7   O1B  25  
O1B  H8   H8   H  0  1  N  N  N  41.715  -25.670   0.792  -6.507  -0.226   0.327  H8   O1B  26  
O1B  H9   H9   H  0  1  N  N  N  41.274  -30.471  -1.105   0.564   1.016  -1.901  H9   O1B  27  
O1B  H10  H10  H  0  1  N  N  N  38.964  -32.462   1.589   1.768   1.370   1.541  H10  O1B  28  
O1B  H11  H11  H  0  1  N  N  N  41.229  -32.981   1.665   1.351   2.679  -1.017  H11  O1B  29  
O1B  H12  H12  H  0  1  N  N  N  39.402  -35.545  -2.593   4.949  -0.695  -1.241  H12  O1B  30  
O1B  H13  H13  H  0  1  N  N  N  40.009  -33.876  -2.862   5.723   0.196   0.091  H13  O1B  31  
O1B  H14  H14  H  0  1  N  N  N  37.644  -33.040  -2.990   5.474  -1.786   1.561  H14  O1B  32  
O1B  H15  H15  H  0  1  N  N  N  37.042  -34.712  -2.732   4.700  -2.676   0.228  H15  O1B  33  
O1B  H16  H16  H  0  1  N  N  N  37.210  -34.161  -5.019   7.052  -3.159   0.372  H16  O1B  34  
O1B  H17  H17  H  0  1  N  N  N  38.804  -33.836  -4.876   6.744  -2.339  -1.041  H17  O1B  35  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
O1B  N   C    SING  N  N   1  
O1B  C   C1   SING  N  N   2  
O1B  C1  N1   SING  N  N   3  
O1B  N1  C2   SING  N  N   4  
O1B  O6  P    DOUB  N  N   5  
O1B  O   C2   DOUB  N  N   6  
O1B  O2  C4   SING  N  N   7  
O1B  C2  C3   SING  N  N   8  
O1B  O5  P    SING  N  N   9  
O1B  C4  C3   SING  N  N  10  
O1B  C4  C5   SING  N  N  11  
O1B  P   O4   SING  N  N  12  
O1B  P   O7   SING  N  N  13  
O1B  C3  O1   SING  N  N  14  
O1B  C6  O4   SING  N  N  15  
O1B  C6  C5   SING  N  N  16  
O1B  C5  O3   SING  N  N  17  
O1B  O3  H1   SING  N  N  18  
O1B  C4  H2   SING  N  N  19  
O1B  C5  H3   SING  N  N  20  
O1B  C6  H4   SING  N  N  21  
O1B  C6  H5   SING  N  N  22  
O1B  N1  H6   SING  N  N  23  
O1B  O5  H7   SING  N  N  24  
O1B  O7  H8   SING  N  N  25  
O1B  O2  H9   SING  N  N  26  
O1B  C3  H10  SING  N  N  27  
O1B  O1  H11  SING  N  N  28  
O1B  C1  H12  SING  N  N  29  
O1B  C1  H13  SING  N  N  30  
O1B  C   H14  SING  N  N  31  
O1B  C   H15  SING  N  N  32  
O1B  N   H16  SING  N  N  33  
O1B  N   H17  SING  N  N  34  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
O1B  InChI             InChI                 1.03   "InChI=1S/C7H17N2O8P/c8-1-2-9-7(13)6(12)5(11)4(10)3-17-18(14,15)16/h4-6,10-12H,1-3,8H2,(H,9,13)(H2,14,15,16)/t4-,5-,6+/m1/s1"  
O1B  InChIKey          InChI                 1.03   FUFPHFARIIPLRI-PBXRRBTRSA-N  
O1B  SMILES_CANONICAL  CACTVS                3.385  "NCCNC(=O)[C@@H](O)[C@H](O)[C@H](O)CO[P](O)(O)=O"  
O1B  SMILES            CACTVS                3.385  "NCCNC(=O)[CH](O)[CH](O)[CH](O)CO[P](O)(O)=O"  
O1B  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C(CNC(=O)[C@H]([C@@H]([C@@H](COP(=O)(O)O)O)O)O)N"  
O1B  SMILES            "OpenEye OEToolkits"  2.0.7  "C(CNC(=O)C(C(C(COP(=O)(O)O)O)O)O)N"  
#
_pdbx_chem_comp_identifier.comp_id          O1B
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "[(2~{R},3~{R},4~{S})-5-(2-azanylethylamino)-2,3,4-tris(oxidanyl)-5-oxidanylidene-pentyl] dihydrogen phosphate"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
O1B  "Create component"  2020-01-20  PDBE  
O1B  "Modify name"       2020-01-24  PDBE  
O1B  "Initial release"   2020-07-29  RCSB  
##
