data_N7B
# 
_chem_comp.id                                    N7B 
_chem_comp.name                                  "~{N}-[2-(2-hydroxyethyloxy)-5-[4-[[1-(phenylmethyl)indazol-5-yl]amino]-7~{H}-pyrrolo[2,3-d]pyrimidin-5-yl]phenyl]propanamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C31 H29 N7 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2019-11-14 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        547.607 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     N7B 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6TFZ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
N7B C4  C1  C 0 1 Y N N N N N 5.253  9.852  0.846  -0.394 2.823  -0.228 C4  N7B 1  
N7B C5  C2  C 0 1 Y N N N N N 5.262  11.239 0.848  -1.713 3.087  -0.620 C5  N7B 2  
N7B C6  C3  C 0 1 Y N N N N N 4.036  11.871 0.941  -2.110 4.424  -0.801 C6  N7B 3  
N7B N1  N1  N 0 1 Y N N N N N 2.862  11.194 0.976  -1.214 5.387  -0.592 N1  N7B 4  
N7B N3  N2  N 0 1 Y N N N N N 4.076  9.173  0.897  0.428  3.853  -0.043 N3  N7B 5  
N7B C2  C4  C 0 1 Y N N N N N 2.862  9.833  0.980  0.015  5.094  -0.225 C2  N7B 6  
N7B CAA C5  C 0 1 Y N N N N N 5.545  13.447 0.856  -3.888 3.125  -1.247 CAA N7B 7  
N7B CAB C6  C 0 1 Y N N N N N 6.193  12.273 0.803  -2.893 2.266  -0.918 CAB N7B 8  
N7B CAC C7  C 0 1 Y N N N N N 7.582  12.285 0.676  -2.979 0.786  -0.870 CAC N7B 9  
N7B CAD C8  C 0 1 Y N N N N N 8.393  13.079 1.518  -4.018 0.170  -0.175 CAD N7B 10 
N7B CAE C9  C 0 1 Y N N N N N 9.799  13.075 1.338  -4.095 -1.212 -0.133 CAE N7B 11 
N7B CAF C10 C 0 1 Y N N N N N 10.386 12.333 0.287  -3.134 -1.983 -0.784 CAF N7B 12 
N7B CAG C11 C 0 1 Y N N N N N 9.590  11.558 -0.568 -2.100 -1.368 -1.474 CAG N7B 13 
N7B CAH C12 C 0 1 Y N N N N N 8.186  11.573 -0.357 -2.023 0.009  -1.524 CAH N7B 14 
N7B CAJ C13 C 0 1 N N N N N N 11.128 13.128 3.241  -5.745 -1.194 1.584  CAJ N7B 15 
N7B CAK C14 C 0 1 N N N N N N 12.114 13.935 4.130  -6.806 -1.897 2.391  CAK N7B 16 
N7B CAM C15 C 0 1 N N N N N N 11.755 13.774 5.637  -7.328 -0.955 3.477  CAM N7B 17 
N7B CAO C16 C 0 1 N N N N N N 12.469 11.160 0.031  -2.191 -4.068 -1.432 CAO N7B 18 
N7B CAP C17 C 0 1 N N N N N N 13.989 11.409 0.243  -2.441 -5.569 -1.274 CAP N7B 19 
N7B CAS C18 C 0 1 Y N N N N N 7.085  6.977  1.786  1.742  0.230  1.101  CAS N7B 20 
N7B CAT C19 C 0 1 Y N N N N N 6.366  4.898  0.791  4.057  0.746  0.812  CAT N7B 21 
N7B CAU C20 C 0 1 Y N N N N N 5.704  5.592  -0.169 3.715  1.796  -0.061 CAU N7B 22 
N7B CAX C21 C 0 1 Y N N N N N 5.114  4.665  -0.966 4.972  2.404  -0.485 CAX N7B 23 
N7B CAY C22 C 0 1 N N N N N N 6.733  2.502  1.392  6.221  -0.198 1.701  CAY N7B 24 
N7B CAZ C23 C 0 1 Y N N N N N 5.741  2.033  2.322  6.555  -1.414 0.875  CAZ N7B 25 
N7B CBA C24 C 0 1 Y N N N N N 6.122  1.257  3.417  7.713  -1.440 0.120  CBA N7B 26 
N7B CBB C25 C 0 1 Y N N N N N 5.192  0.781  4.346  8.019  -2.555 -0.638 CBB N7B 27 
N7B CBC C26 C 0 1 Y N N N N N 3.829  1.080  4.160  7.168  -3.644 -0.641 CBC N7B 28 
N7B CBD C27 C 0 1 Y N N N N N 3.421  1.855  3.074  6.010  -3.618 0.114  CBD N7B 29 
N7B CBE C28 C 0 1 Y N N N N N 4.380  2.330  2.143  5.707  -2.505 0.877  CBE N7B 30 
N7B CBF C29 C 0 1 Y N N N N N 6.397  7.720  0.786  1.391  1.272  0.242  CBF N7B 31 
N7B CBG C30 C 0 1 Y N N N N N 7.068  5.546  1.777  3.052  -0.029 1.385  CBG N7B 32 
N7B CBH C31 C 0 1 Y N N N N N 5.703  6.960  -0.198 2.368  2.055  -0.340 CBH N7B 33 
N7B NAI N3  N 0 1 N N N N N N 10.634 13.789 2.158  -5.138 -1.835 0.565  NAI N7B 34 
N7B NAR N4  N 0 1 N N N N N N 6.411  9.117  0.787  0.041  1.524  -0.032 NAR N7B 35 
N7B NAV N5  N 0 1 Y N N N N N 6.182  3.576  0.541  5.427  0.735  0.898  NAV N7B 36 
N7B NAW N6  N 0 1 Y N N N N N 5.405  3.428  -0.534 5.943  1.757  0.095  NAW N7B 37 
N7B NBN N7  N 0 1 Y N N N N N 4.194  13.194 0.935  -3.425 4.412  -1.179 NBN N7B 38 
N7B OAL O1  O 0 1 N N N N N N 10.882 11.941 3.512  -5.437 -0.052 1.851  OAL N7B 39 
N7B OAN O2  O 0 1 N N N N N N 11.768 12.410 0.120  -3.209 -3.340 -0.742 OAN N7B 40 
N7B OAQ O3  O 0 1 N N N N N N 14.171 12.392 1.268  -3.663 -5.919 -1.926 OAQ N7B 41 
N7B H1  H1  H 0 1 N N N N N N 1.936  9.281  1.046  0.715  5.901  -0.065 H1  N7B 42 
N7B H2  H2  H 0 1 N N N N N N 6.005  14.424 0.839  -4.892 2.839  -1.522 H2  N7B 43 
N7B H3  H3  H 0 1 N N N N N N 7.945  13.684 2.292  -4.762 0.769  0.329  H3  N7B 44 
N7B H4  H4  H 0 1 N N N N N N 10.030 10.970 -1.360 -1.359 -1.967 -1.981 H4  N7B 45 
N7B H5  H5  H 0 1 N N N N N N 7.558  11.006 -1.028 -1.217 0.486  -2.062 H5  N7B 46 
N7B H6  H6  H 0 1 N N N N N N 13.137 13.567 3.961  -7.627 -2.188 1.736  H6  N7B 47 
N7B H7  H7  H 0 1 N N N N N N 12.058 14.999 3.857  -6.379 -2.786 2.856  H7  N7B 48 
N7B H8  H8  H 0 1 N N N N N N 12.464 14.352 6.247  -8.096 -1.463 4.061  H8  N7B 49 
N7B H9  H9  H 0 1 N N N N N N 10.734 14.144 5.812  -6.507 -0.664 4.132  H9  N7B 50 
N7B H10 H10 H 0 1 N N N N N N 11.813 12.712 5.916  -7.755 -0.066 3.012  H10 N7B 51 
N7B H11 H11 H 0 1 N N N N N N 12.097 10.474 0.806  -1.217 -3.815 -1.013 H11 N7B 52 
N7B H12 H12 H 0 1 N N N N N N 12.304 10.716 -0.962 -2.210 -3.806 -2.490 H12 N7B 53 
N7B H13 H13 H 0 1 N N N N N N 14.476 10.470 0.544  -1.617 -6.124 -1.723 H13 N7B 54 
N7B H14 H14 H 0 1 N N N N N N 14.436 11.770 -0.695 -2.510 -5.816 -0.214 H14 N7B 55 
N7B H15 H15 H 0 1 N N N N N N 7.626  7.499  2.561  0.969  -0.375 1.550  H15 N7B 56 
N7B H16 H16 H 0 1 N N N N N N 4.499  4.890  -1.824 5.078  3.240  -1.159 H16 N7B 57 
N7B H17 H17 H 0 1 N N N N N N 7.055  1.665  0.755  5.649  -0.501 2.578  H17 N7B 58 
N7B H18 H18 H 0 1 N N N N N N 7.597  2.891  1.951  7.143  0.289  2.019  H18 N7B 59 
N7B H19 H19 H 0 1 N N N N N N 7.166  1.017  3.551  8.378  -0.589 0.122  H19 N7B 60 
N7B H20 H20 H 0 1 N N N N N N 5.514  0.193  5.193  8.923  -2.575 -1.228 H20 N7B 61 
N7B H21 H21 H 0 1 N N N N N N 3.096  0.708  4.861  7.407  -4.514 -1.233 H21 N7B 62 
N7B H22 H22 H 0 1 N N N N N N 2.376  2.093  2.942  5.345  -4.468 0.112  H22 N7B 63 
N7B H23 H23 H 0 1 N N N N N N 4.063  2.920  1.296  4.804  -2.486 1.470  H23 N7B 64 
N7B H24 H24 H 0 1 N N N N N N 7.598  4.986  2.533  3.309  -0.836 2.056  H24 N7B 65 
N7B H25 H25 H 0 1 N N N N N N 5.166  7.473  -0.982 2.096  2.859  -1.008 H25 N7B 66 
N7B H26 H26 H 0 1 N N N N N N 10.868 14.743 1.971  -5.424 -2.728 0.315  H26 N7B 67 
N7B H27 H27 H 0 1 N N N N N N 7.288  9.595  0.744  -0.589 0.788  -0.085 H27 N7B 68 
N7B H28 H28 H 0 1 N N N N N N 3.465  13.877 0.980  -3.954 5.202  -1.370 H28 N7B 69 
N7B H29 H29 H 0 1 N N N N N N 15.099 12.545 1.399  -3.885 -6.859 -1.866 H29 N7B 70 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
N7B CAX NAW DOUB Y N 1  
N7B CAX CAU SING Y N 2  
N7B CAG CAH DOUB Y N 3  
N7B CAG CAF SING Y N 4  
N7B NAW NAV SING Y N 5  
N7B CAH CAC SING Y N 6  
N7B CBH CAU DOUB Y N 7  
N7B CBH CBF SING Y N 8  
N7B CAU CAT SING Y N 9  
N7B CAO OAN SING N N 10 
N7B CAO CAP SING N N 11 
N7B OAN CAF SING N N 12 
N7B CAP OAQ SING N N 13 
N7B CAF CAE DOUB Y N 14 
N7B NAV CAT SING Y N 15 
N7B NAV CAY SING N N 16 
N7B CAC CAB SING N N 17 
N7B CAC CAD DOUB Y N 18 
N7B CBF NAR SING N N 19 
N7B CBF CAS DOUB Y N 20 
N7B NAR C4  SING N N 21 
N7B CAT CBG DOUB Y N 22 
N7B CAB C5  SING Y N 23 
N7B CAB CAA DOUB Y N 24 
N7B C4  C5  DOUB Y N 25 
N7B C4  N3  SING Y N 26 
N7B C5  C6  SING Y N 27 
N7B CAA NBN SING Y N 28 
N7B N3  C2  DOUB Y N 29 
N7B NBN C6  SING Y N 30 
N7B C6  N1  DOUB Y N 31 
N7B N1  C2  SING Y N 32 
N7B CAE CAD SING Y N 33 
N7B CAE NAI SING N N 34 
N7B CAY CAZ SING N N 35 
N7B CBG CAS SING Y N 36 
N7B CBE CAZ DOUB Y N 37 
N7B CBE CBD SING Y N 38 
N7B NAI CAJ SING N N 39 
N7B CAZ CBA SING Y N 40 
N7B CBD CBC DOUB Y N 41 
N7B CAJ OAL DOUB N N 42 
N7B CAJ CAK SING N N 43 
N7B CBA CBB DOUB Y N 44 
N7B CAK CAM SING N N 45 
N7B CBC CBB SING Y N 46 
N7B C2  H1  SING N N 47 
N7B CAA H2  SING N N 48 
N7B CAD H3  SING N N 49 
N7B CAG H4  SING N N 50 
N7B CAH H5  SING N N 51 
N7B CAK H6  SING N N 52 
N7B CAK H7  SING N N 53 
N7B CAM H8  SING N N 54 
N7B CAM H9  SING N N 55 
N7B CAM H10 SING N N 56 
N7B CAO H11 SING N N 57 
N7B CAO H12 SING N N 58 
N7B CAP H13 SING N N 59 
N7B CAP H14 SING N N 60 
N7B CAS H15 SING N N 61 
N7B CAX H16 SING N N 62 
N7B CAY H17 SING N N 63 
N7B CAY H18 SING N N 64 
N7B CBA H19 SING N N 65 
N7B CBB H20 SING N N 66 
N7B CBC H21 SING N N 67 
N7B CBD H22 SING N N 68 
N7B CBE H23 SING N N 69 
N7B CBG H24 SING N N 70 
N7B CBH H25 SING N N 71 
N7B NAI H26 SING N N 72 
N7B NAR H27 SING N N 73 
N7B NBN H28 SING N N 74 
N7B OAQ H29 SING N N 75 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
N7B InChI            InChI                1.03  "InChI=1S/C31H29N7O3/c1-2-28(40)37-25-15-21(8-11-27(25)41-13-12-39)24-17-32-30-29(24)31(34-19-33-30)36-23-9-10-26-22(14-23)16-35-38(26)18-20-6-4-3-5-7-20/h3-11,14-17,19,39H,2,12-13,18H2,1H3,(H,37,40)(H2,32,33,34,36)" 
N7B InChIKey         InChI                1.03  JWMTXHVHBHZXTN-UHFFFAOYSA-N                                                                                                                                                                                              
N7B SMILES_CANONICAL CACTVS               3.385 "CCC(=O)Nc1cc(ccc1OCCO)c2c[nH]c3ncnc(Nc4ccc5n(Cc6ccccc6)ncc5c4)c23"                                                                                                                                                      
N7B SMILES           CACTVS               3.385 "CCC(=O)Nc1cc(ccc1OCCO)c2c[nH]c3ncnc(Nc4ccc5n(Cc6ccccc6)ncc5c4)c23"                                                                                                                                                      
N7B SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC(=O)Nc1cc(ccc1OCCO)c2c[nH]c3c2c(ncn3)Nc4ccc5c(c4)cnn5Cc6ccccc6"                                                                                                                                                      
N7B SMILES           "OpenEye OEToolkits" 2.0.7 "CCC(=O)Nc1cc(ccc1OCCO)c2c[nH]c3c2c(ncn3)Nc4ccc5c(c4)cnn5Cc6ccccc6"                                                                                                                                                      
# 
_pdbx_chem_comp_identifier.comp_id           N7B 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{N}-[2-(2-hydroxyethyloxy)-5-[4-[[1-(phenylmethyl)indazol-5-yl]amino]-7~{H}-pyrrolo[2,3-d]pyrimidin-5-yl]phenyl]propanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
N7B "Create component" 2019-11-14 PDBE 
N7B "Initial release"  2020-09-30 RCSB 
N7B "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            N7B 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               CAM 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
