data_KEB
#

_chem_comp.id                                   KEB
_chem_comp.name                                 "(3~{S},6~{S})-3-[(3,5-dimethyl-4-oxidanyl-phenyl)methyl]-6-[(4-hydroxyphenyl)methyl]piperazine-2,5-dione"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C20 H22 N2 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-05-15
_chem_comp.pdbx_modified_date                   2020-04-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       354.400
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    KEB
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6RQ5
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
KEB  C01  C1   C  0  1  N  N  N   -7.200  15.468   4.703  -4.515   2.692  -0.976  C01  KEB   1  
KEB  C02  C2   C  0  1  Y  N  N   -6.808  16.857   4.206  -4.214   1.231  -0.762  C02  KEB   2  
KEB  C03  C3   C  0  1  Y  N  N   -6.497  17.071   2.854  -2.904   0.801  -0.672  C03  KEB   3  
KEB  C04  C4   C  0  1  Y  N  N   -6.163  18.340   2.347  -2.627  -0.539  -0.475  C04  KEB   4  
KEB  C05  C5   C  0  1  N  N  N   -5.832  18.495   0.879  -1.198  -1.005  -0.378  C05  KEB   5  
KEB  C06  C6   C  0  1  N  N  S   -7.123  18.701   0.145  -0.745  -0.960   1.083  C06  KEB   6  
KEB  C08  C7   C  0  1  N  N  N   -8.755  20.283   0.705   0.384   1.149   1.628  C08  KEB   7  
KEB  C10  C8   C  0  1  N  N  S   -9.634  19.131   1.231   1.734   0.603   1.273  C10  KEB   8  
KEB  C11  C9   C  0  1  N  N  N   -9.659  19.197   2.779   2.124   1.096  -0.122  C11  KEB   9  
KEB  C12  C10  C  0  1  Y  N  N  -10.765  18.270   3.146   3.530   0.654  -0.437  C12  KEB  10  
KEB  C13  C11  C  0  1  Y  N  N  -12.020  18.829   3.394   4.599   1.462  -0.099  C13  KEB  11  
KEB  C14  C12  C  0  1  Y  N  N  -13.096  18.020   3.748   5.889   1.059  -0.387  C14  KEB  12  
KEB  C15  C13  C  0  1  Y  N  N  -12.904  16.631   3.892   6.110  -0.158  -1.016  C15  KEB  13  
KEB  C17  C14  C  0  1  Y  N  N  -11.630  16.080   3.682   5.035  -0.967  -1.353  C17  KEB  14  
KEB  C18  C15  C  0  1  Y  N  N  -10.561  16.911   3.327   3.747  -0.562  -1.058  C18  KEB  15  
KEB  C20  C16  C  0  1  N  N  N   -8.133  17.561   0.308   0.615  -1.579   1.195  C20  KEB  16  
KEB  C22  C17  C  0  1  Y  N  N   -6.065  19.406   3.245  -3.660  -1.452  -0.368  C22  KEB  17  
KEB  C23  C18  C  0  1  Y  N  N   -6.342  19.248   4.619  -4.971  -1.027  -0.456  C23  KEB  18  
KEB  C24  C19  C  0  1  N  N  N   -6.263  20.407   5.597  -6.096  -2.023  -0.339  C24  KEB  19  
KEB  C25  C20  C  0  1  Y  N  N   -6.704  17.968   5.085  -5.252   0.318  -0.648  C25  KEB  20  
KEB  N07  N1   N  0  1  N  N  N   -7.591  20.027   0.203  -0.735   0.424   1.536  N07  KEB  21  
KEB  N19  N2   N  0  1  N  N  N   -9.305  17.764   0.790   1.735  -0.854   1.281  N19  KEB  22  
KEB  O09  O1   O  0  1  N  N  N   -9.210  21.542   0.759   0.304   2.296   2.014  O09  KEB  23  
KEB  O16  O2   O  0  1  N  N  N  -13.921  15.783   4.223   7.378  -0.557  -1.301  O16  KEB  24  
KEB  O21  O3   O  0  1  N  N  N   -7.782  16.332  -0.086   0.704  -2.789   1.207  O21  KEB  25  
KEB  O26  O4   O  0  1  N  N  N   -6.978  17.798   6.420  -6.542   0.739  -0.729  O26  KEB  26  
KEB  H1   H1   H  0  1  N  N  N   -6.297  14.917   5.003  -4.605   3.190  -0.011  H1   KEB  27  
KEB  H2   H2   H  0  1  N  N  N   -7.874  15.565   5.567  -3.707   3.150  -1.547  H2   KEB  28  
KEB  H3   H3   H  0  1  N  N  N   -7.712  14.922   3.897  -5.451   2.794  -1.525  H3   KEB  29  
KEB  H4   H4   H  0  1  N  N  N   -6.515  16.229   2.177  -2.096   1.513  -0.756  H4   KEB  30  
KEB  H5   H5   H  0  1  N  N  N   -5.330  17.588   0.509  -1.123  -2.027  -0.750  H5   KEB  31  
KEB  H6   H6   H  0  1  N  N  N   -5.174  19.364   0.732  -0.561  -0.353  -0.976  H6   KEB  32  
KEB  H7   H7   H  0  1  N  N  N   -6.817  18.589  -0.906  -1.448  -1.530   1.691  H7   KEB  33  
KEB  H8   H8   H  0  1  N  N  N  -10.660  19.344   0.895   2.466   0.963   1.996  H8   KEB  34  
KEB  H9   H9   H  0  1  N  N  N   -8.703  18.856   3.203   1.438   0.679  -0.859  H9   KEB  35  
KEB  H10  H10  H  0  1  N  N  N   -9.871  20.219   3.126   2.070   2.184  -0.150  H10  KEB  36  
KEB  H11  H11  H  0  1  N  N  N  -12.157  19.897   3.311   4.427   2.409   0.390  H11  KEB  37  
KEB  H12  H12  H  0  1  N  N  N  -14.072  18.454   3.911   6.724   1.691  -0.124  H12  KEB  38  
KEB  H13  H13  H  0  1  N  N  N  -11.475  15.017   3.794   5.204  -1.915  -1.843  H13  KEB  39  
KEB  H14  H14  H  0  1  N  N  N   -9.575  16.492   3.194   2.911  -1.194  -1.317  H14  KEB  40  
KEB  H15  H15  H  0  1  N  N  N   -5.769  20.377   2.877  -3.441  -2.499  -0.214  H15  KEB  41  
KEB  H16  H16  H  0  1  N  N  N   -7.242  20.905   5.657  -6.390  -2.118   0.707  H16  KEB  42  
KEB  H17  H17  H  0  1  N  N  N   -5.983  20.029   6.591  -6.949  -1.679  -0.925  H17  KEB  43  
KEB  H18  H18  H  0  1  N  N  N   -5.506  21.127   5.252  -5.765  -2.991  -0.713  H18  KEB  44  
KEB  H19  H19  H  0  1  N  N  N   -7.022  20.773  -0.145  -1.577   0.838   1.782  H19  KEB  45  
KEB  H20  H20  H  0  1  N  N  N   -9.971  17.021   0.864   2.584  -1.317   1.352  H20  KEB  46  
KEB  H21  H21  H  0  1  N  N  N  -14.723  16.279   4.336   7.797  -1.069  -0.596  H21  KEB  47  
KEB  H22  H22  H  0  1  N  N  N   -6.866  18.625   6.875  -6.900   0.736  -1.628  H22  KEB  48  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
KEB  O21  C20  DOUB  N  N   1  
KEB  C06  N07  SING  N  N   2  
KEB  C06  C20  SING  N  N   3  
KEB  C06  C05  SING  N  N   4  
KEB  N07  C08  SING  N  N   5  
KEB  C20  N19  SING  N  N   6  
KEB  C08  O09  DOUB  N  N   7  
KEB  C08  C10  SING  N  N   8  
KEB  N19  C10  SING  N  N   9  
KEB  C05  C04  SING  N  N  10  
KEB  C10  C11  SING  N  N  11  
KEB  C04  C03  DOUB  Y  N  12  
KEB  C04  C22  SING  Y  N  13  
KEB  C11  C12  SING  N  N  14  
KEB  C03  C02  SING  Y  N  15  
KEB  C12  C18  DOUB  Y  N  16  
KEB  C12  C13  SING  Y  N  17  
KEB  C22  C23  DOUB  Y  N  18  
KEB  C18  C17  SING  Y  N  19  
KEB  C13  C14  DOUB  Y  N  20  
KEB  C17  C15  DOUB  Y  N  21  
KEB  C14  C15  SING  Y  N  22  
KEB  C15  O16  SING  N  N  23  
KEB  C02  C01  SING  N  N  24  
KEB  C02  C25  DOUB  Y  N  25  
KEB  C23  C25  SING  Y  N  26  
KEB  C23  C24  SING  N  N  27  
KEB  C25  O26  SING  N  N  28  
KEB  C01  H1   SING  N  N  29  
KEB  C01  H2   SING  N  N  30  
KEB  C01  H3   SING  N  N  31  
KEB  C03  H4   SING  N  N  32  
KEB  C05  H5   SING  N  N  33  
KEB  C05  H6   SING  N  N  34  
KEB  C06  H7   SING  N  N  35  
KEB  C10  H8   SING  N  N  36  
KEB  C11  H9   SING  N  N  37  
KEB  C11  H10  SING  N  N  38  
KEB  C13  H11  SING  N  N  39  
KEB  C14  H12  SING  N  N  40  
KEB  C17  H13  SING  N  N  41  
KEB  C18  H14  SING  N  N  42  
KEB  C22  H15  SING  N  N  43  
KEB  C24  H16  SING  N  N  44  
KEB  C24  H17  SING  N  N  45  
KEB  C24  H18  SING  N  N  46  
KEB  N07  H19  SING  N  N  47  
KEB  N19  H20  SING  N  N  48  
KEB  O16  H21  SING  N  N  49  
KEB  O26  H22  SING  N  N  50  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
KEB  InChI             InChI                 1.03   "InChI=1S/C20H22N2O4/c1-11-7-14(8-12(2)18(11)24)10-17-20(26)21-16(19(25)22-17)9-13-3-5-15(23)6-4-13/h3-8,16-17,23-24H,9-10H2,1-2H3,(H,21,26)(H,22,25)/t16-,17-/m0/s1"  
KEB  InChIKey          InChI                 1.03   UCEYENNEMBTPOB-IRXDYDNUSA-N  
KEB  SMILES_CANONICAL  CACTVS                3.385  "Cc1cc(C[C@@H]2NC(=O)[C@H](Cc3ccc(O)cc3)NC2=O)cc(C)c1O"  
KEB  SMILES            CACTVS                3.385  "Cc1cc(C[CH]2NC(=O)[CH](Cc3ccc(O)cc3)NC2=O)cc(C)c1O"  
KEB  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cc1cc(cc(c1O)C)C[C@H]2C(=O)N[C@H](C(=O)N2)Cc3ccc(cc3)O"  
KEB  SMILES            "OpenEye OEToolkits"  2.0.7  "Cc1cc(cc(c1O)C)CC2C(=O)NC(C(=O)N2)Cc3ccc(cc3)O"  
#
_pdbx_chem_comp_identifier.comp_id          KEB
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(3~{S},6~{S})-3-[(3,5-dimethyl-4-oxidanyl-phenyl)methyl]-6-[(4-hydroxyphenyl)methyl]piperazine-2,5-dione"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
KEB  "Create component"  2019-05-15  PDBE  
KEB  "Initial release"   2020-04-22  RCSB  
##
