data_J6B
#

_chem_comp.id                                   J6B
_chem_comp.name                                 "~{N}-[(2~{S})-1-[(3~{R},3~{a}~{R},6~{R},6~{a}~{R})-6-azanyl-3-oxidanyl-2,3,3~{a},5,6,6~{a}-hexahydrofuro[3,2-b]pyrrol-4-yl]-4-methyl-1-oxidanylidene-pentan-2-yl]-3-fluoranyl-4-[2-(4-methylpiperazin-1-yl)-1,3-thiazol-4-yl]benzamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C27 H37 F N6 O4 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-02-01
_chem_comp.pdbx_modified_date                   2020-02-14
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       560.684
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    J6B
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6QM0
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
J6B  C1   C1   C  0  1  N  N  R  18.288  20.297  -13.312    7.830  -1.597  -0.914  C1   J6B   1  
J6B  C2   C2   C  0  1  N  N  R  19.620  19.716  -12.886    6.317  -1.948  -0.954  C2   J6B   2  
J6B  C3   C3   C  0  1  N  N  R  20.563  20.360  -13.914    6.158  -3.040   0.125  C3   J6B   3  
J6B  O5   O1   O  0  1  N  N  N  18.570  21.313  -14.299    8.266  -1.998   0.401  O5   J6B   4  
J6B  N6   N1   N  0  1  N  N  N  19.825  20.195  -11.481    5.581  -0.747  -0.541  N6   J6B   5  
J6B  C7   C4   C  0  1  N  N  R  17.643  20.863  -12.059    7.830  -0.048  -0.975  C7   J6B   6  
J6B  C8   C5   C  0  1  N  N  N  18.819  21.195  -11.155    6.549   0.303  -0.179  C8   J6B   7  
J6B  C11  C6   C  0  1  N  N  S  20.978  20.443   -9.285    3.614   0.672  -0.055  C11  J6B   8  
J6B  C12  C7   C  0  1  N  N  N  20.740  19.725  -10.619    4.239  -0.625  -0.501  C12  J6B   9  
J6B  C14  C8   C  0  1  N  N  N  22.385  21.043   -9.266    4.057   0.986   1.376  C14  J6B  10  
J6B  C16  C9   C  0  1  N  N  N  19.627  19.037   -7.817    1.391   1.652  -0.241  C16  J6B  11  
J6B  C19  C10  C  0  1  N  N  N  24.224  22.085   -7.917    3.861   2.623   3.253  C19  J6B  12  
J6B  C21  C11  C  0  1  Y  N  N  19.535  17.714   -7.096   -0.079   1.530  -0.285  C21  J6B  13  
J6B  C22  C12  C  0  1  Y  N  N  20.561  17.270   -6.267   -0.872   2.672  -0.434  C22  J6B  14  
J6B  C24  C13  C  0  1  Y  N  N  19.338  15.217   -5.893   -2.843   1.298  -0.367  C24  J6B  15  
J6B  C27  C14  C  0  1  Y  N  N  19.177  13.844   -5.330   -4.317   1.173  -0.411  C27  J6B  16  
J6B  C30  C15  C  0  1  Y  N  N  18.076  11.924   -4.845   -6.234   0.013  -0.359  C30  J6B  17  
J6B  C33  C16  C  0  1  N  N  N  17.332   9.669   -4.395   -8.467  -0.726  -0.369  C33  J6B  18  
J6B  C34  C17  C  0  1  N  N  N  16.104   8.843   -4.099   -9.330  -1.990  -0.350  C34  J6B  19  
J6B  O13  O2   O  0  1  N  N  N  21.375  18.694  -10.850    3.535  -1.558  -0.823  O13  J6B  20  
J6B  C4   C18  C  0  1  N  N  N  19.939  21.640  -14.419    7.588  -3.243   0.672  C4   J6B  21  
J6B  O31  O3   O  0  1  N  N  N  20.772  19.594  -15.116    5.665  -4.249  -0.456  O31  J6B  22  
J6B  N39  N2   N  0  1  N  N  N  16.852  22.080  -12.276    9.023   0.503  -0.320  N39  J6B  23  
J6B  C17  C19  C  0  1  N  N  N  22.729  21.777   -7.967    3.525   2.361   1.784  C17  J6B  24  
J6B  C18  C20  C  0  1  N  N  N  21.902  23.063   -7.832    4.174   3.439   0.913  C18  J6B  25  
J6B  N15  N3   N  0  1  N  N  N  20.835  19.447   -8.243    2.155   0.551  -0.098  N15  J6B  26  
J6B  O20  O4   O  0  1  N  N  N  18.620  19.634   -8.171    1.913   2.746  -0.334  O20  J6B  27  
J6B  C26  C21  C  0  1  Y  N  N  18.425  16.911   -7.313   -0.679   0.272  -0.184  C26  J6B  28  
J6B  C25  C22  C  0  1  Y  N  N  18.327  15.658   -6.720   -2.050   0.158  -0.225  C25  J6B  29  
J6B  C23  C23  C  0  1  Y  N  N  20.458  16.026   -5.675   -2.244   2.557  -0.475  C23  J6B  30  
J6B  F39  F1   F  0  1  N  N  N  21.461  15.622   -4.897   -3.011   3.660  -0.618  F39  J6B  31  
J6B  N31  N4   N  0  1  Y  N  N  17.982  13.173   -5.373   -4.938  -0.002  -0.308  N31  J6B  32  
J6B  S29  S1   S  0  1  Y  N  N  19.662  11.517   -4.343   -6.794   1.671  -0.556  S29  J6B  33  
J6B  C28  C24  C  0  1  Y  N  N  20.223  13.081   -4.810   -5.127   2.239  -0.552  C28  J6B  34  
J6B  N32  N5   N  0  1  N  N  N  17.041  11.043   -4.819   -7.050  -1.102  -0.274  N32  J6B  35  
J6B  C37  C25  C  0  1  N  N  N  15.765  11.454   -5.389   -6.789  -1.852   0.963  C37  J6B  36  
J6B  C36  C26  C  0  1  N  N  N  14.661  10.581   -4.844   -7.652  -3.116   0.981  C36  J6B  37  
J6B  N35  N6   N  0  1  N  N  N  14.980   9.153   -4.966   -9.069  -2.740   0.886  N35  J6B  38  
J6B  C38  C27  C  0  1  N  N  N  13.801   8.391   -4.468   -9.936  -3.923   0.977  C38  J6B  39  
J6B  H1   H1   H  0  1  N  N  N  17.652  19.505  -13.734    8.399  -2.056  -1.722  H1   J6B  40  
J6B  H2   H2   H  0  1  N  N  N  19.632  18.618  -12.957    6.007  -2.291  -1.941  H2   J6B  41  
J6B  H3   H3   H  0  1  N  N  N  21.524  20.586  -13.430    5.491  -2.700   0.917  H3   J6B  42  
J6B  H4   H4   H  0  1  N  N  N  17.024  20.088  -11.584    7.756   0.301  -2.005  H4   J6B  43  
J6B  H5   H5   H  0  1  N  N  N  19.196  22.207  -11.363    6.175   1.283  -0.475  H5   J6B  44  
J6B  H6   H6   H  0  1  N  N  N  18.528  21.123  -10.097    6.750   0.281   0.892  H6   J6B  45  
J6B  H7   H7   H  0  1  N  N  N  20.234  21.244   -9.162    3.932   1.476  -0.719  H7   J6B  46  
J6B  H8   H8   H  0  1  N  N  N  23.111  20.228   -9.406    3.664   0.228   2.053  H8   J6B  47  
J6B  H9   H9   H  0  1  N  N  N  22.469  21.756  -10.099    5.146   0.989   1.426  H9   J6B  48  
J6B  H10  H10  H  0  1  N  N  N  24.459  22.612   -6.980    4.942   2.597   3.389  H10  J6B  49  
J6B  H11  H11  H  0  1  N  N  N  24.794  21.145   -7.962    3.481   3.602   3.544  H11  J6B  50  
J6B  H12  H12  H  0  1  N  N  N  24.496  22.720   -8.773    3.398   1.855   3.874  H12  J6B  51  
J6B  H13  H13  H  0  1  N  N  N  21.427  17.890   -6.089   -0.408   3.644  -0.516  H13  J6B  52  
J6B  H14  H14  H  0  1  N  N  N  17.897   9.172   -5.197   -8.638  -0.183  -1.298  H14  J6B  53  
J6B  H15  H15  H  0  1  N  N  N  17.948   9.711   -3.484   -8.733  -0.092   0.477  H15  J6B  54  
J6B  H16  H16  H  0  1  N  N  N  15.802   9.027   -3.057  -10.384  -1.712  -0.392  H16  J6B  55  
J6B  H17  H17  H  0  1  N  N  N  16.359   7.780   -4.225   -9.084  -2.611  -1.212  H17  J6B  56  
J6B  H18  H18  H  0  1  N  N  N  20.219  21.846  -15.463    7.560  -3.435   1.745  H18  J6B  57  
J6B  H19  H19  H  0  1  N  N  N  20.209  22.501  -13.790    8.080  -4.065   0.151  H19  J6B  58  
J6B  H20  H20  H  0  1  N  N  N  21.167  18.759  -14.895    5.546  -4.970   0.177  H20  J6B  59  
J6B  H21  H21  H  0  1  N  N  N  16.464  22.386  -11.406    9.024   1.512  -0.359  H21  J6B  60  
J6B  H22  H22  H  0  1  N  N  N  17.440  22.798  -12.649    9.095   0.179   0.633  H22  J6B  61  
J6B  H24  H24  H  0  1  N  N  N  22.482  21.118   -7.122    2.443   2.387   1.648  H24  J6B  62  
J6B  H25  H25  H  0  1  N  N  N  22.166  23.572   -6.893    3.934   3.253  -0.134  H25  J6B  63  
J6B  H26  H26  H  0  1  N  N  N  22.116  23.727   -8.682    3.794   4.418   1.204  H26  J6B  64  
J6B  H27  H27  H  0  1  N  N  N  20.831  22.811   -7.824    5.255   3.413   1.048  H27  J6B  65  
J6B  H28  H28  H  0  1  N  N  N  21.656  19.054   -7.829    1.738  -0.322  -0.024  H28  J6B  66  
J6B  H29  H29  H  0  1  N  N  N  17.628  17.264   -7.950   -0.067  -0.611  -0.074  H29  J6B  67  
J6B  H30  H30  H  0  1  N  N  N  17.465  15.034   -6.906   -2.513  -0.815  -0.147  H30  J6B  68  
J6B  H31  H31  H  0  1  N  N  N  21.243  13.422   -4.713   -4.809   3.267  -0.645  H31  J6B  69  
J6B  H32  H32  H  0  1  N  N  N  15.804  11.354   -6.484   -5.736  -2.130   1.004  H32  J6B  70  
J6B  H33  H33  H  0  1  N  N  N  15.567  12.503   -5.124   -7.036  -1.231   1.824  H33  J6B  71  
J6B  H34  H34  H  0  1  N  N  N  14.509  10.822   -3.781   -7.387  -3.750   0.135  H34  J6B  72  
J6B  H35  H35  H  0  1  N  N  N  13.736  10.788   -5.402   -7.481  -3.659   1.911  H35  J6B  73  
J6B  H37  H37  H  0  1  N  N  N  14.002   7.312   -4.544   -9.770  -4.422   1.931  H37  J6B  74  
J6B  H38  H38  H  0  1  N  N  N  13.611   8.656   -3.417  -10.979  -3.616   0.904  H38  J6B  75  
J6B  H39  H39  H  0  1  N  N  N  12.919   8.643   -5.075   -9.701  -4.609   0.163  H39  J6B  76  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
J6B  O31  C3   SING  N  N   1  
J6B  C4   O5   SING  N  N   2  
J6B  C4   C3   SING  N  N   3  
J6B  O5   C1   SING  N  N   4  
J6B  C3   C2   SING  N  N   5  
J6B  C1   C2   SING  N  N   6  
J6B  C1   C7   SING  N  N   7  
J6B  C2   N6   SING  N  N   8  
J6B  N39  C7   SING  N  N   9  
J6B  C7   C8   SING  N  N  10  
J6B  N6   C8   SING  N  N  11  
J6B  N6   C12  SING  N  N  12  
J6B  O13  C12  DOUB  N  N  13  
J6B  C12  C11  SING  N  N  14  
J6B  C11  C14  SING  N  N  15  
J6B  C11  N15  SING  N  N  16  
J6B  C14  C17  SING  N  N  17  
J6B  N15  C16  SING  N  N  18  
J6B  O20  C16  DOUB  N  N  19  
J6B  C17  C19  SING  N  N  20  
J6B  C17  C18  SING  N  N  21  
J6B  C16  C21  SING  N  N  22  
J6B  C26  C21  DOUB  Y  N  23  
J6B  C26  C25  SING  Y  N  24  
J6B  C21  C22  SING  Y  N  25  
J6B  C25  C24  DOUB  Y  N  26  
J6B  C22  C23  DOUB  Y  N  27  
J6B  C24  C23  SING  Y  N  28  
J6B  C24  C27  SING  N  N  29  
J6B  C23  F39  SING  N  N  30  
J6B  C37  C36  SING  N  N  31  
J6B  C37  N32  SING  N  N  32  
J6B  N31  C27  SING  Y  N  33  
J6B  N31  C30  DOUB  Y  N  34  
J6B  C27  C28  DOUB  Y  N  35  
J6B  N35  C36  SING  N  N  36  
J6B  N35  C38  SING  N  N  37  
J6B  N35  C34  SING  N  N  38  
J6B  C30  N32  SING  N  N  39  
J6B  C30  S29  SING  Y  N  40  
J6B  N32  C33  SING  N  N  41  
J6B  C28  S29  SING  Y  N  42  
J6B  C33  C34  SING  N  N  43  
J6B  C1   H1   SING  N  N  44  
J6B  C2   H2   SING  N  N  45  
J6B  C3   H3   SING  N  N  46  
J6B  C7   H4   SING  N  N  47  
J6B  C8   H5   SING  N  N  48  
J6B  C8   H6   SING  N  N  49  
J6B  C11  H7   SING  N  N  50  
J6B  C14  H8   SING  N  N  51  
J6B  C14  H9   SING  N  N  52  
J6B  C19  H10  SING  N  N  53  
J6B  C19  H11  SING  N  N  54  
J6B  C19  H12  SING  N  N  55  
J6B  C22  H13  SING  N  N  56  
J6B  C33  H14  SING  N  N  57  
J6B  C33  H15  SING  N  N  58  
J6B  C34  H16  SING  N  N  59  
J6B  C34  H17  SING  N  N  60  
J6B  C4   H18  SING  N  N  61  
J6B  C4   H19  SING  N  N  62  
J6B  O31  H20  SING  N  N  63  
J6B  N39  H21  SING  N  N  64  
J6B  N39  H22  SING  N  N  65  
J6B  C17  H24  SING  N  N  66  
J6B  C18  H25  SING  N  N  67  
J6B  C18  H26  SING  N  N  68  
J6B  C18  H27  SING  N  N  69  
J6B  N15  H28  SING  N  N  70  
J6B  C26  H29  SING  N  N  71  
J6B  C25  H30  SING  N  N  72  
J6B  C28  H31  SING  N  N  73  
J6B  C37  H32  SING  N  N  74  
J6B  C37  H33  SING  N  N  75  
J6B  C36  H34  SING  N  N  76  
J6B  C36  H35  SING  N  N  77  
J6B  C38  H37  SING  N  N  78  
J6B  C38  H38  SING  N  N  79  
J6B  C38  H39  SING  N  N  80  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
J6B  InChI             InChI                 1.03   "InChI=1S/C27H37FN6O4S/c1-15(2)10-20(26(37)34-12-19(29)24-23(34)22(35)13-38-24)30-25(36)16-4-5-17(18(28)11-16)21-14-39-27(31-21)33-8-6-32(3)7-9-33/h4-5,11,14-15,19-20,22-24,35H,6-10,12-13,29H2,1-3H3,(H,30,36)/t19-,20+,22+,23-,24-/m1/s1"  
J6B  InChIKey          InChI                 1.03   ZHJAUJFKEWMTLB-WPMOPGCQSA-N  
J6B  SMILES_CANONICAL  CACTVS                3.385  "CC(C)C[C@H](NC(=O)c1ccc(c(F)c1)c2csc(n2)N3CCN(C)CC3)C(=O)N4C[C@@H](N)[C@H]5OC[C@H](O)[C@@H]45"  
J6B  SMILES            CACTVS                3.385  "CC(C)C[CH](NC(=O)c1ccc(c(F)c1)c2csc(n2)N3CCN(C)CC3)C(=O)N4C[CH](N)[CH]5OC[CH](O)[CH]45"  
J6B  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC(C)C[C@@H](C(=O)N1C[C@H]([C@@H]2[C@H]1[C@H](CO2)O)N)NC(=O)c3ccc(c(c3)F)c4csc(n4)N5CCN(CC5)C"  
J6B  SMILES            "OpenEye OEToolkits"  2.0.7  "CC(C)CC(C(=O)N1CC(C2C1C(CO2)O)N)NC(=O)c3ccc(c(c3)F)c4csc(n4)N5CCN(CC5)C"  
#
_pdbx_chem_comp_identifier.comp_id          J6B
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "~{N}-[(2~{S})-1-[(3~{R},3~{a}~{R},6~{R},6~{a}~{R})-6-azanyl-3-oxidanyl-2,3,3~{a},5,6,6~{a}-hexahydrofuro[3,2-b]pyrrol-4-yl]-4-methyl-1-oxidanylidene-pentan-2-yl]-3-fluoranyl-4-[2-(4-methylpiperazin-1-yl)-1,3-thiazol-4-yl]benzamide"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
J6B  "Create component"  2019-02-01  RCSB  
J6B  "Initial release"   2020-02-19  RCSB  
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