data_IYB
# 
_chem_comp.id                                    IYB 
_chem_comp.name                                  "undecyl dihydrogen phosphate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C11 H25 O4 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-04-20 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        252.288 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     IYB 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7ZM4 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
IYB C2  C1  C 0 1 N N N N N N 20.426 0.505  34.640 0.347   -0.331 0.057  C2  IYB 1  
IYB C3  C2  C 0 1 N N N N N N 20.644 -0.708 35.499 -0.911  0.532  -0.055 C3  IYB 2  
IYB C4  C3  C 0 1 N N N N N N 21.602 -1.704 34.905 -2.151  -0.358 0.053  C4  IYB 3  
IYB C5  C4  C 0 1 N N N N N N 21.866 -2.910 35.761 -3.410  0.505  -0.058 C5  IYB 4  
IYB C6  C5  C 0 1 N N N N N N 22.513 -4.051 35.015 -4.649  -0.386 0.049  C6  IYB 5  
IYB C7  C6  C 0 1 N N N N N N 23.684 -3.647 34.144 -5.908  0.477  -0.062 C7  IYB 6  
IYB C8  C7  C 0 1 N N N N N N 24.796 -2.970 34.897 -7.148  -0.413 0.046  C8  IYB 7  
IYB C15 C8  C 0 1 N N N N N N 19.831 1.363  32.358 2.846   -0.303 0.061  C15 IYB 8  
IYB O03 O1  O 0 1 N N N N N N 19.370 4.629  33.477 5.779   -1.003 -1.230 O03 IYB 9  
IYB O05 O2  O 0 1 N N N N N N 18.786 2.224  32.892 4.003   0.528  -0.040 O05 IYB 10 
IYB O07 O3  O 0 1 N N N N N N 19.264 3.921  31.032 5.674   -0.822 1.286  O07 IYB 11 
IYB P01 P1  P 0 1 N N N N N N 18.748 3.744  32.441 5.505   -0.047 0.036  P01 IYB 12 
IYB C1  C9  C 0 1 N N N N N N 19.966 0.164  33.249 1.587   0.560  -0.051 C1  IYB 13 
IYB C9  C10 C 0 1 N N N N N N 26.169 -3.084 34.279 -8.406  0.450  -0.066 C9  IYB 14 
IYB C10 C11 C 0 1 N N N N N N 27.236 -2.545 35.194 -9.646  -0.441 0.042  C10 IYB 15 
IYB O1  O4  O 0 1 N Y N N N N 17.216 3.978  32.448 6.550   1.178  0.019  O1  IYB 16 
IYB H1  H1  H 0 1 N N N N N N 21.373 1.060  34.570 0.352   -0.845 1.018  H1  IYB 17 
IYB H2  H2  H 0 1 N N N N N N 19.664 1.139  35.116 0.357   -1.066 -0.748 H2  IYB 18 
IYB H3  H3  H 0 1 N N N N N N 21.043 -0.379 36.470 -0.921  1.267  0.750  H3  IYB 19 
IYB H4  H4  H 0 1 N N N N N N 19.675 -1.206 35.650 -0.915  1.046  -1.016 H4  IYB 20 
IYB H5  H5  H 0 1 N N N N N N 21.187 -2.049 33.946 -2.142  -1.093 -0.752 H5  IYB 21 
IYB H6  H6  H 0 1 N N N N N N 22.560 -1.194 34.727 -2.147  -0.872 1.015  H6  IYB 22 
IYB H7  H7  H 0 1 N N N N N N 22.531 -2.612 36.585 -3.419  1.240  0.747  H7  IYB 23 
IYB H8  H8  H 0 1 N N N N N N 20.908 -3.262 36.171 -3.414  1.018  -1.020 H8  IYB 24 
IYB H9  H9  H 0 1 N N N N N N 21.752 -4.517 34.373 -4.640  -1.121 -0.755 H9  IYB 25 
IYB H10 H10 H 0 1 N N N N N N 22.870 -4.785 35.752 -4.645  -0.900 1.011  H10 IYB 26 
IYB H11 H11 H 0 1 N N N N N N 23.318 -2.956 33.370 -5.917  1.212  0.743  H11 IYB 27 
IYB H12 H12 H 0 1 N N N N N N 24.089 -4.551 33.666 -5.912  0.991  -1.023 H12 IYB 28 
IYB H13 H13 H 0 1 N N N N N N 24.549 -1.901 34.976 -7.138  -1.148 -0.759 H13 IYB 29 
IYB H14 H14 H 0 1 N N N N N N 24.841 -3.412 35.903 -7.143  -0.927 1.007  H14 IYB 30 
IYB H15 H15 H 0 1 N N N N N N 19.562 1.041  31.341 2.855   -1.038 -0.744 H15 IYB 31 
IYB H16 H16 H 0 1 N N N N N N 20.784 1.912  32.328 2.850   -0.817 1.022  H16 IYB 32 
IYB H17 H17 H 0 1 N N N N N N 20.020 5.188  33.068 5.686   -0.561 -2.084 H17 IYB 33 
IYB H18 H18 H 0 1 N N N N N N 18.987 -0.332 33.317 1.583   1.073  -1.012 H18 IYB 34 
IYB H19 H19 H 0 1 N N N N N N 20.696 -0.525 32.799 1.578   1.294  0.754  H19 IYB 35 
IYB H20 H20 H 0 1 N N N N N N 26.380 -4.143 34.070 -8.416  1.184  0.739  H20 IYB 36 
IYB H21 H21 H 0 1 N N N N N N 26.185 -2.515 33.338 -8.410  0.963  -1.027 H21 IYB 37 
IYB H22 H22 H 0 1 N N N N N N 28.219 -2.645 34.711 -9.637  -1.176 -0.763 H22 IYB 38 
IYB H23 H23 H 0 1 N N N N N N 27.037 -1.484 35.404 -9.642  -0.955 1.003  H23 IYB 39 
IYB H24 H24 H 0 1 N N N N N N 27.232 -3.112 36.136 -10.543 0.174  -0.038 H24 IYB 40 
IYB H25 H25 H 0 1 N N N N N N 16.923 4.183  31.568 7.477   0.905  0.063  H25 IYB 41 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
IYB O07 P01 DOUB N N 1  
IYB C15 O05 SING N N 2  
IYB C15 C1  SING N N 3  
IYB P01 O05 SING N N 4  
IYB P01 O03 SING N N 5  
IYB C1  C2  SING N N 6  
IYB C7  C8  SING N N 7  
IYB C7  C6  SING N N 8  
IYB C9  C8  SING N N 9  
IYB C9  C10 SING N N 10 
IYB C2  C3  SING N N 11 
IYB C4  C3  SING N N 12 
IYB C4  C5  SING N N 13 
IYB C6  C5  SING N N 14 
IYB P01 O1  SING N N 15 
IYB C2  H1  SING N N 16 
IYB C2  H2  SING N N 17 
IYB C3  H3  SING N N 18 
IYB C3  H4  SING N N 19 
IYB C4  H5  SING N N 20 
IYB C4  H6  SING N N 21 
IYB C5  H7  SING N N 22 
IYB C5  H8  SING N N 23 
IYB C6  H9  SING N N 24 
IYB C6  H10 SING N N 25 
IYB C7  H11 SING N N 26 
IYB C7  H12 SING N N 27 
IYB C8  H13 SING N N 28 
IYB C8  H14 SING N N 29 
IYB C15 H15 SING N N 30 
IYB C15 H16 SING N N 31 
IYB O03 H17 SING N N 32 
IYB C1  H18 SING N N 33 
IYB C1  H19 SING N N 34 
IYB C9  H20 SING N N 35 
IYB C9  H21 SING N N 36 
IYB C10 H22 SING N N 37 
IYB C10 H23 SING N N 38 
IYB C10 H24 SING N N 39 
IYB O1  H25 SING N N 40 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
IYB InChI            InChI                1.06  "InChI=1S/C11H25O4P/c1-2-3-4-5-6-7-8-9-10-11-15-16(12,13)14/h2-11H2,1H3,(H2,12,13,14)" 
IYB InChIKey         InChI                1.06  VAIOGRPEROWKJX-UHFFFAOYSA-N                                                            
IYB SMILES_CANONICAL CACTVS               3.385 "CCCCCCCCCCCO[P](O)(O)=O"                                                              
IYB SMILES           CACTVS               3.385 "CCCCCCCCCCCO[P](O)(O)=O"                                                              
IYB SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCCCCCCCOP(=O)(O)O"                                                                
IYB SMILES           "OpenEye OEToolkits" 2.0.7 "CCCCCCCCCCCOP(=O)(O)O"                                                                
# 
_pdbx_chem_comp_identifier.comp_id           IYB 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "undecyl dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
IYB "Create component"  2022-04-20 PDBE 
IYB "Modify descriptor" 2022-08-22 RCSB 
IYB "Initial release"   2022-09-28 RCSB 
IYB "Modify PCM"        2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            IYB 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           Lipid/lipid-like 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               P01 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
