data_DJB
#

_chem_comp.id                                   DJB
_chem_comp.name                                 "3-O-acetyl-2-acetamido-2-deoxy-alpha-D-galactopyranuronic acid"
_chem_comp.type                                 "D-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C10 H15 N O8"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;alpha-D-2-N-acetyl-3-O-acetylgalactosaminuronic acid; 3-O-acetyl-2-acetamido-2-deoxy-alpha-D-galacturonic acid;
3-O-acetyl-2-acetamido-2-deoxy-D-galacturonic acid; 3-O-acetyl-2-acetamido-2-deoxy-galacturonic acid
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2018-01-18
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       277.228
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    DJB
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6FI2
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  DJB  "alpha-D-2-N-acetyl-3-O-acetylgalactosaminuronic acid"      PDB  ?  
2  DJB  "3-O-acetyl-2-acetamido-2-deoxy-alpha-D-galacturonic acid"  PDB  ?  
3  DJB  "3-O-acetyl-2-acetamido-2-deoxy-D-galacturonic acid"        PDB  ?  
4  DJB  "3-O-acetyl-2-acetamido-2-deoxy-galacturonic acid"          PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
DJB  C11   C11  C  0  1  N  N  N  -10.277  33.221  31.405   4.575  -1.497   0.163  C11   DJB   1  
DJB  C10   C10  C  0  1  N  N  N   -9.194  33.304  32.490   3.147  -1.468  -0.320  C10   DJB   2  
DJB  O10   O10  O  0  1  N  N  N   -8.044  33.638  32.196   2.811  -2.158  -1.259  O10   DJB   3  
DJB  N2    N2   N  0  1  N  N  N   -9.565  32.992  33.743   2.245  -0.675   0.291  N2    DJB   4  
DJB  C2    C2   C  0  1  N  N  R   -8.557  33.024  34.830   0.858  -0.647  -0.178  C2    DJB   5  
DJB  C13   C13  C  0  1  N  N  N  -10.250  29.482  36.866   1.631   4.133  -0.470  C13   DJB   6  
DJB  C12   C12  C  0  1  N  N  N   -9.447  29.522  35.569   0.932   2.959   0.166  C12   DJB   7  
DJB  O12   O12  O  0  1  N  N  N   -9.420  28.502  34.859   0.397   3.085   1.242  O12   DJB   8  
DJB  C3    C3   C  0  1  N  N  R   -8.842  31.917  35.837   0.213   0.687   0.209  C3    DJB   9  
DJB  O3    O3   O  0  1  N  N  N   -8.721  30.662  35.122   0.904   1.773  -0.463  O3    DJB  10  
DJB  C4    C4   C  0  1  N  N  R   -7.799  31.977  36.947  -1.258   0.674  -0.218  C4    DJB  11  
DJB  O4    O4   O  0  1  N  N  N   -6.467  31.671  36.400  -1.342   0.560  -1.640  O4    DJB  12  
DJB  C5    C5   C  0  1  N  N  S   -7.881  33.381  37.611  -1.960  -0.521   0.433  C5    DJB  13  
DJB  C6    C6   C  0  1  N  N  N   -6.899  33.496  38.800  -3.393  -0.575  -0.029  C6    DJB  14  
DJB  O6A   O6B  O  0  1  N  N  N   -6.090  34.457  38.859  -3.778  -1.505  -0.696  O6A   DJB  15  
DJB  O6B   O6A  O  0  1  N  N  N   -6.927  32.647  39.723  -4.242   0.411   0.302  O6B   DJB  16  
DJB  O5    O5   O  0  1  N  N  N   -7.574  34.410  36.625  -1.292  -1.727   0.057  O5    DJB  17  
DJB  C1    C1   C  0  1  N  N  S   -8.499  34.426  35.505   0.074  -1.791   0.472  C1    DJB  18  
DJB  O1    O1   O  0  1  N  Y  N   -9.789  34.830  35.940   0.147  -1.671   1.894  O1    DJB  19  
DJB  H1A   H1   H  0  1  N  N  N   -9.843  33.494  30.432   4.685  -2.268   0.925  H1A   DJB  20  
DJB  H2A   H2   H  0  1  N  N  N  -10.670  32.195  31.357   5.237  -1.716  -0.674  H2A   DJB  21  
DJB  H3A   H3   H  0  1  N  N  N  -11.095  33.915  31.649   4.834  -0.527   0.587  H3A   DJB  22  
DJB  H4A   H4   H  0  1  N  N  N  -10.512  32.740  33.941   2.514  -0.123   1.042  H4A   DJB  23  
DJB  H2    H5   H  0  1  N  N  N   -7.568  32.830  34.389   0.837  -0.762  -1.262  H2    DJB  24  
DJB  H6    H6   H  0  1  N  N  N  -10.712  28.491  36.981   1.549   5.002   0.183  H6    DJB  25  
DJB  H7    H7   H  0  1  N  N  N   -9.581  29.675  37.717   2.683   3.891  -0.623  H7    DJB  26  
DJB  H8    H8   H  0  1  N  N  N  -11.035  30.251  36.835   1.166   4.355  -1.431  H8    DJB  27  
DJB  H3    H9   H  0  1  N  N  N   -9.851  32.039  36.259   0.278   0.824   1.288  H3    DJB  28  
DJB  H4    H10  H  0  1  N  N  N   -8.057  31.225  37.707  -1.739   1.598   0.103  H4    DJB  29  
DJB  HO4   H11  H  0  1  N  Y  N   -5.822  31.710  37.096  -2.247   0.545  -1.981  HO4   DJB  30  
DJB  H5    H12  H  0  1  N  N  N   -8.904  33.526  37.989  -1.931  -0.412   1.518  H5    DJB  31  
DJB  HO6B  H13  H  0  0  N  N  N   -6.282  32.874  40.382  -5.152   0.332  -0.017  HO6B  DJB  32  
DJB  H1    H14  H  0  1  N  N  N   -8.131  35.139  34.753   0.503  -2.745   0.165  H1    DJB  33  
DJB  HO1   H15  H  0  1  N  Y  N   -9.732  35.686  36.348  -0.328  -2.364   2.372  HO1   DJB  34  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DJB  C11  C10   SING  N  N   1  
DJB  O10  C10   DOUB  N  N   2  
DJB  C10  N2    SING  N  N   3  
DJB  N2   C2    SING  N  N   4  
DJB  C2   C1    SING  N  N   5  
DJB  C2   C3    SING  N  N   6  
DJB  O12  C12   DOUB  N  N   7  
DJB  O3   C12   SING  N  N   8  
DJB  O3   C3    SING  N  N   9  
DJB  C1   O1    SING  N  N  10  
DJB  C1   O5    SING  N  N  11  
DJB  C12  C13   SING  N  N  12  
DJB  C3   C4    SING  N  N  13  
DJB  O4   C4    SING  N  N  14  
DJB  O5   C5    SING  N  N  15  
DJB  C4   C5    SING  N  N  16  
DJB  C5   C6    SING  N  N  17  
DJB  C6   O6A   DOUB  N  N  18  
DJB  C6   O6B   SING  N  N  19  
DJB  C11  H1A   SING  N  N  20  
DJB  C11  H2A   SING  N  N  21  
DJB  C11  H3A   SING  N  N  22  
DJB  N2   H4A   SING  N  N  23  
DJB  C2   H2    SING  N  N  24  
DJB  C13  H6    SING  N  N  25  
DJB  C13  H7    SING  N  N  26  
DJB  C13  H8    SING  N  N  27  
DJB  C3   H3    SING  N  N  28  
DJB  C4   H4    SING  N  N  29  
DJB  O4   HO4   SING  N  N  30  
DJB  C5   H5    SING  N  N  31  
DJB  O6B  HO6B  SING  N  N  32  
DJB  C1   H1    SING  N  N  33  
DJB  O1   HO1   SING  N  N  34  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
DJB  InChI             InChI                 1.03   "InChI=1S/C10H15NO8/c1-3(12)11-5-7(18-4(2)13)6(14)8(9(15)16)19-10(5)17/h5-8,10,14,17H,1-2H3,(H,11,12)(H,15,16)/t5-,6-,7-,8+,10+/m1/s1"  
DJB  InChIKey          InChI                 1.03   ZCWUGSBUHDVNCR-BGJNVIQHSA-N  
DJB  SMILES_CANONICAL  CACTVS                3.385  "CC(=O)N[C@H]1[C@@H](O)O[C@@H]([C@H](O)[C@@H]1OC(C)=O)C(O)=O"  
DJB  SMILES            CACTVS                3.385  "CC(=O)N[CH]1[CH](O)O[CH]([CH](O)[CH]1OC(C)=O)C(O)=O"  
DJB  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "CC(=O)N[C@@H]1[C@H]([C@H]([C@H](O[C@@H]1O)C(=O)O)O)OC(=O)C"  
DJB  SMILES            "OpenEye OEToolkits"  2.0.6  "CC(=O)NC1C(C(C(OC1O)C(=O)O)O)OC(=O)C"  
#
_pdbx_chem_comp_identifier.comp_id          DJB
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.6
_pdbx_chem_comp_identifier.identifier       "(2~{S},3~{R},4~{R},5~{R},6~{S})-5-acetamido-4-acetyloxy-3,6-bis(oxidanyl)oxane-2-carboxylic acid"
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
DJB  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
DJB  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
DJB  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
DJB  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
DJB  "Create component"          2018-01-18  EBI   
DJB  "Initial release"           2018-05-02  RCSB  
DJB  "Other modification"        2020-07-03  RCSB  
DJB  "Modify name"               2020-07-17  RCSB  
DJB  "Modify synonyms"           2020-07-17  RCSB  
DJB  "Modify internal type"      2020-07-17  RCSB  
DJB  "Modify linking type"       2020-07-17  RCSB  
DJB  "Modify atom id"            2020-07-17  RCSB  
DJB  "Modify component atom id"  2020-07-17  RCSB  
DJB  "Modify leaving atom flag"  2020-07-17  RCSB  
##
