data_A5B
# 
_chem_comp.id                                    A5B 
_chem_comp.name                                  "alisertib " 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C27 H20 Cl F N4 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-02-21 
_chem_comp.pdbx_modified_date                    2016-11-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        518.924 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A5B 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5IA0 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A5B C26 C1  C  0 1 N N N -27.946 -5.308 -25.120 -6.712 -0.501 3.252  C26 A5B 1  
A5B O2  O1  O  0 1 N N N -27.104 -6.468 -25.249 -7.157 -0.466 1.895  O2  A5B 2  
A5B C24 C2  C  0 1 Y N N -26.131 -6.404 -26.204 -6.252 -0.079 0.960  C24 A5B 3  
A5B C25 C3  C  0 1 Y N N -26.047 -5.348 -27.124 -4.965 0.260  1.337  C25 A5B 4  
A5B C23 C4  C  0 1 Y N N -25.226 -7.473 -26.233 -6.616 -0.027 -0.395 C23 A5B 5  
A5B C27 C5  C  0 1 N N N -25.243 -8.541 -25.315 -7.980 -0.391 -0.808 C27 A5B 6  
A5B O4  O2  O  0 1 N N N -24.737 -9.643 -25.615 -8.795 -0.738 0.024  O4  A5B 7  
A5B O3  O3  O  0 1 N N N -25.640 -8.372 -24.142 -8.327 -0.339 -2.110 O3  A5B 8  
A5B C22 C6  C  0 1 Y N N -24.222 -7.450 -27.188 -5.676 0.374  -1.351 C22 A5B 9  
A5B C21 C7  C  0 1 Y N N -24.153 -6.408 -28.110 -4.411 0.711  -0.967 C21 A5B 10 
A5B C20 C8  C  0 1 Y N N -25.039 -5.340 -28.087 -4.043 0.656  0.375  C20 A5B 11 
A5B N4  N1  N  0 1 N N N -24.820 -4.402 -29.036 -2.750 1.003  0.756  N4  A5B 12 
A5B C12 C9  C  0 1 Y N N -25.428 -3.213 -29.159 -1.684 0.732  -0.087 C12 A5B 13 
A5B N3  N2  N  0 1 Y N N -26.557 -2.869 -28.516 -0.479 1.168  0.240  N3  A5B 14 
A5B N2  N3  N  0 1 Y N N -24.865 -2.353 -30.041 -1.898 0.039  -1.196 N2  A5B 15 
A5B C11 C10 C  0 1 Y N N -25.427 -1.091 -30.262 -0.904 -0.243 -2.022 C11 A5B 16 
A5B C10 C11 C  0 1 Y N N -26.575 -0.749 -29.567 0.374  0.198  -1.715 C10 A5B 17 
A5B C9  C12 C  0 1 N N N -27.033 0.528  -29.896 1.513  -0.135 -2.636 C9  A5B 18 
A5B N1  N4  N  0 1 N N N -27.272 1.311  -28.667 2.470  -0.989 -1.940 N1  A5B 19 
A5B C13 C13 C  0 1 Y N N -27.123 -1.666 -28.681 0.572  0.924  -0.552 C13 A5B 20 
A5B C14 C14 C  0 1 Y N N -28.283 -1.457 -27.947 1.893  1.459  -0.158 C14 A5B 21 
A5B C19 C15 C  0 1 Y N N -29.015 -2.621 -27.713 1.923  2.730  0.428  C19 A5B 22 
A5B C18 C16 C  0 1 Y N N -30.223 -2.531 -27.024 3.117  3.295  0.816  C18 A5B 23 
A5B C17 C17 C  0 1 Y N N -30.676 -1.294 -26.566 4.305  2.608  0.627  C17 A5B 24 
A5B CL1 CL1 CL 0 0 N N N -32.190 -1.149 -25.698 5.809  3.325  1.115  CL1 A5B 25 
A5B C16 C18 C  0 1 Y N N -29.925 -0.145 -26.789 4.295  1.355  0.053  C16 A5B 26 
A5B C15 C19 C  0 1 Y N N -28.738 -0.223 -27.505 3.088  0.762  -0.344 C15 A5B 27 
A5B C8  C20 C  0 1 N N N -28.066 0.999  -27.648 3.154  -0.582 -0.933 C8  A5B 28 
A5B C7  C21 C  0 1 Y N N -28.043 1.898  -26.580 4.088  -1.546 -0.314 C7  A5B 29 
A5B C6  C22 C  0 1 Y N N -27.465 1.537  -25.353 5.408  -1.635 -0.764 C6  A5B 30 
A5B F1  F1  F  0 1 N N N -26.923 0.230  -25.136 5.836  -0.839 -1.768 F1  A5B 31 
A5B C5  C23 C  0 1 Y N N -27.438 2.446  -24.296 6.275  -2.539 -0.181 C5  A5B 32 
A5B C4  C24 C  0 1 Y N N -27.967 3.723  -24.471 5.840  -3.358 0.848  C4  A5B 33 
A5B C3  C25 C  0 1 Y N N -28.524 4.094  -25.695 4.537  -3.279 1.301  C3  A5B 34 
A5B C2  C26 C  0 1 Y N N -28.544 3.176  -26.736 3.656  -2.373 0.731  C2  A5B 35 
A5B O1  O4  O  0 1 N N N -29.058 3.446  -27.955 2.378  -2.291 1.181  O1  A5B 36 
A5B C1  C27 C  0 1 N N N -28.759 4.781  -28.329 2.009  -3.165 2.249  C1  A5B 37 
A5B H1  H1  H  0 1 N N N -28.686 -5.478 -24.324 -7.531 -0.827 3.894  H1  A5B 38 
A5B H2  H2  H  0 1 N N N -27.329 -4.434 -24.866 -5.880 -1.199 3.344  H2  A5B 39 
A5B H3  H3  H  0 1 N N N -28.467 -5.125 -26.072 -6.387 0.494  3.554  H3  A5B 40 
A5B H4  H4  H  0 1 N N N -26.764 -4.541 -27.086 -4.677 0.218  2.377  H4  A5B 41 
A5B H5  H5  H  0 1 N N N -25.482 -9.161 -23.637 -9.234 -0.587 -2.333 H5  A5B 42 
A5B H6  H6  H  0 1 N N N -23.490 -8.243 -27.218 -5.953 0.416  -2.395 H6  A5B 43 
A5B H7  H7  H  0 1 N N N -23.384 -6.432 -28.868 -3.689 1.020  -1.709 H7  A5B 44 
A5B H8  H8  H  0 1 N N N -24.127 -4.619 -29.723 -2.595 1.434  1.611  H8  A5B 45 
A5B H9  H9  H  0 1 N N N -24.976 -0.400 -30.958 -1.085 -0.809 -2.924 H9  A5B 46 
A5B H10 H10 H  0 1 N N N -26.278 1.038  -30.512 1.130  -0.658 -3.513 H10 A5B 47 
A5B H11 H11 H  0 1 N N N -27.972 0.443  -30.462 2.007  0.784  -2.950 H11 A5B 48 
A5B H12 H12 H  0 1 N N N -28.651 -3.577 -28.060 1.000  3.271  0.578  H12 A5B 49 
A5B H13 H13 H  0 1 N N N -30.809 -3.420 -26.844 3.128  4.276  1.268  H13 A5B 50 
A5B H14 H14 H  0 1 N N N -30.264 0.806  -26.406 5.225  0.824  -0.092 H14 A5B 51 
A5B H15 H15 H  0 1 N N N -27.009 2.162  -23.346 7.295  -2.608 -0.528 H15 A5B 52 
A5B H16 H16 H  0 1 N N N -27.946 4.430  -23.654 6.523  -4.062 1.299  H16 A5B 53 
A5B H17 H17 H  0 1 N N N -28.935 5.084  -25.831 4.206  -3.921 2.103  H17 A5B 54 
A5B H18 H18 H  0 1 N N N -29.183 4.988  -29.323 0.964  -2.998 2.511  H18 A5B 55 
A5B H19 H19 H  0 1 N N N -29.194 5.474  -27.594 2.144  -4.200 1.935  H19 A5B 56 
A5B H20 H20 H  0 1 N N N -27.668 4.917  -28.360 2.638  -2.964 3.117  H20 A5B 57 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A5B C11 N2  DOUB Y N 1  
A5B C11 C10 SING Y N 2  
A5B N2  C12 SING Y N 3  
A5B C9  C10 SING N N 4  
A5B C9  N1  SING N N 5  
A5B C10 C13 DOUB Y N 6  
A5B C12 N4  SING N N 7  
A5B C12 N3  DOUB Y N 8  
A5B N4  C20 SING N N 9  
A5B C13 N3  SING Y N 10 
A5B C13 C14 SING N N 11 
A5B N1  C8  DOUB N N 12 
A5B C1  O1  SING N N 13 
A5B C21 C20 DOUB Y N 14 
A5B C21 C22 SING Y N 15 
A5B C20 C25 SING Y N 16 
A5B O1  C2  SING N N 17 
A5B C14 C19 DOUB Y N 18 
A5B C14 C15 SING Y N 19 
A5B C19 C18 SING Y N 20 
A5B C8  C15 SING N N 21 
A5B C8  C7  SING N N 22 
A5B C15 C16 DOUB Y N 23 
A5B C22 C23 DOUB Y N 24 
A5B C25 C24 DOUB Y N 25 
A5B C18 C17 DOUB Y N 26 
A5B C16 C17 SING Y N 27 
A5B C2  C7  DOUB Y N 28 
A5B C2  C3  SING Y N 29 
A5B C7  C6  SING Y N 30 
A5B C17 CL1 SING N N 31 
A5B C23 C24 SING Y N 32 
A5B C23 C27 SING N N 33 
A5B C24 O2  SING N N 34 
A5B C3  C4  DOUB Y N 35 
A5B O4  C27 DOUB N N 36 
A5B C6  F1  SING N N 37 
A5B C6  C5  DOUB Y N 38 
A5B C27 O3  SING N N 39 
A5B O2  C26 SING N N 40 
A5B C4  C5  SING Y N 41 
A5B C26 H1  SING N N 42 
A5B C26 H2  SING N N 43 
A5B C26 H3  SING N N 44 
A5B C25 H4  SING N N 45 
A5B O3  H5  SING N N 46 
A5B C22 H6  SING N N 47 
A5B C21 H7  SING N N 48 
A5B N4  H8  SING N N 49 
A5B C11 H9  SING N N 50 
A5B C9  H10 SING N N 51 
A5B C9  H11 SING N N 52 
A5B C19 H12 SING N N 53 
A5B C18 H13 SING N N 54 
A5B C16 H14 SING N N 55 
A5B C5  H15 SING N N 56 
A5B C4  H16 SING N N 57 
A5B C3  H17 SING N N 58 
A5B C1  H18 SING N N 59 
A5B C1  H19 SING N N 60 
A5B C1  H20 SING N N 61 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A5B SMILES           ACDLabs              12.01 "COc1cc(ccc1C(O)=O)Nc2nc3c(cn2)CN=C(c4c3ccc(Cl)c4)c5c(F)cccc5OC"                                                                                                                          
A5B InChI            InChI                1.03  "InChI=1S/C27H20ClFN4O4/c1-36-21-5-3-4-20(29)23(21)25-19-10-15(28)6-8-17(19)24-14(12-30-25)13-31-27(33-24)32-16-7-9-18(26(34)35)22(11-16)37-2/h3-11,13H,12H2,1-2H3,(H,34,35)(H,31,32,33)" 
A5B InChIKey         InChI                1.03  ZLHFILGSQDJULK-UHFFFAOYSA-N                                                                                                                                                               
A5B SMILES_CANONICAL CACTVS               3.385 "COc1cccc(F)c1C2=NCc3cnc(Nc4ccc(C(O)=O)c(OC)c4)nc3c5ccc(Cl)cc25"                                                                                                                          
A5B SMILES           CACTVS               3.385 "COc1cccc(F)c1C2=NCc3cnc(Nc4ccc(C(O)=O)c(OC)c4)nc3c5ccc(Cl)cc25"                                                                                                                          
A5B SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "COc1cccc(c1C2=NCc3cnc(nc3-c4c2cc(cc4)Cl)Nc5ccc(c(c5)OC)C(=O)O)F"                                                                                                                         
A5B SMILES           "OpenEye OEToolkits" 2.0.4 "COc1cccc(c1C2=NCc3cnc(nc3-c4c2cc(cc4)Cl)Nc5ccc(c(c5)OC)C(=O)O)F"                                                                                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A5B "SYSTEMATIC NAME" ACDLabs              12.01 "4-{[9-chloro-7-(2-fluoro-6-methoxyphenyl)-5H-pyrimido[5,4-d][2]benzazepin-2-yl]amino}-2-methoxybenzoic acid"            
A5B "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "4-[[9-chloranyl-7-(2-fluoranyl-6-methoxy-phenyl)-5~{H}-pyrimido[5,4-d][2]benzazepin-2-yl]amino]-2-methoxy-benzoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A5B "Create component" 2016-02-21 EBI  
A5B "Initial release"  2016-11-09 RCSB 
# 
