data_5WB
#

_chem_comp.id                                   5WB
_chem_comp.name                                 "5-[(3S)-3-methoxy-3-(3,4,5-trimethoxyphenyl)prop-1-yn-1-yl]-6-methylpyrimidine-2,4-diamine"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C18 H22 N4 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "(S)-2,4-diamino-5-(3-methoxy-3-(3,4,5-trimethoxyphenyl)prop-1-ynyl)-6-methylpyrimidine"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2009-09-22
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       358.392
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    5WB
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3JWK
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
5WB  N1    N1    N  0  1  Y  N  N  24.597  -29.448   3.455  -4.355  -2.024   0.031  N1    5WB   1  
5WB  C2    C2    C  0  1  Y  N  N  24.136  -29.452   4.714  -5.487  -1.339  -0.043  C2    5WB   2  
5WB  N3    N3    N  0  1  Y  N  N  24.989  -29.314   5.739  -5.503  -0.019  -0.161  N3    5WB   3  
5WB  C4    C4    C  0  1  Y  N  N  26.312  -29.151   5.567  -4.369   0.671  -0.209  C4    5WB   4  
5WB  C5    C5    C  0  1  Y  N  N  26.812  -29.131   4.271  -3.146  -0.024  -0.134  C5    5WB   5  
5WB  C6    C6    C  0  1  Y  N  N  25.915  -29.294   3.210  -3.183  -1.413  -0.011  C6    5WB   6  
5WB  C1A   C1A   C  0  1  N  N  N  28.883  -24.320   1.530   3.477  -0.150  -3.586  C1A   5WB   7  
5WB  C1B   C1B   C  0  1  N  N  N  33.926  -28.644  -0.865   2.579  -0.460   3.508  C1B   5WB   8  
5WB  C1C   C1C   C  0  1  N  N  N  31.916  -24.525  -1.503   5.956  -1.205   0.295  C1C   5WB   9  
5WB  C1D   C1D   C  0  1  N  N  N  30.627  -30.917   2.200  -0.039   4.190   0.520  C1D   5WB  10  
5WB  C1E   C1E   C  0  1  N  N  N  26.398  -29.286   1.759  -1.905  -2.207   0.075  C1E   5WB  11  
5WB  N1F   N1F   N  0  1  N  N  N  22.832  -29.595   4.955  -6.689  -2.022   0.004  N1F   5WB  12  
5WB  N1G   N1G   N  0  1  N  N  N  27.113  -29.018   6.637  -4.390   2.049  -0.333  N1G   5WB  13  
5WB  C1H   C1H   C  0  1  N  N  N  28.217  -28.974   4.022  -1.898   0.677  -0.182  C1H   5WB  14  
5WB  C1I   C1I   C  0  1  N  N  N  29.384  -28.843   3.730  -0.875   1.252  -0.221  C1I   5WB  15  
5WB  C1J   C1J   C  0  1  Y  N  N  30.144  -26.732   1.766   2.211   0.586  -1.312  C1J   5WB  16  
5WB  C1K   C1K   C  0  1  Y  N  N  31.729  -28.351   0.927   1.911   0.482   1.063  C1K   5WB  17  
5WB  O1N   O1N   O  0  1  N  N  N  29.524  -24.870   0.361   3.910  -0.718  -2.349  O1N   5WB  18  
5WB  O1O   O1O   O  0  1  N  N  N  32.665  -28.097  -1.287   3.309  -0.929   2.372  O1O   5WB  19  
5WB  O1P   O1P   O  0  1  N  N  N  31.199  -25.795  -1.641   4.643  -1.735   0.103  O1P   5WB  20  
5WB  O1Q   O1Q   O  0  1  N  N  N  31.377  -29.997   3.028   0.479   2.893   0.820  O1Q   5WB  21  
5WB  C1U   C1U   C  0  1  Y  N  N  30.883  -27.899   1.947   1.542   0.985  -0.170  C1U   5WB  22  
5WB  C1W   C1W   C  0  1  Y  N  N  30.245  -26.018   0.564   3.252  -0.326  -1.225  C1W   5WB  23  
5WB  C1X   C1X   C  0  1  Y  N  N  31.845  -27.648  -0.275   2.947  -0.434   1.158  C1X   5WB  24  
5WB  C1Y   C1Y   C  0  1  Y  N  N  31.097  -26.479  -0.455   3.622  -0.839   0.013  C1Y   5WB  25  
5WB  C1Z   C1Z   C  0  1  N  N  S  30.774  -28.689   3.262   0.408   1.972  -0.271  C1Z   5WB  26  
5WB  H1A   H1A   H  0  1  N  N  N  28.336  -23.407   1.253   3.585   0.934  -3.546  H1A   5WB  27  
5WB  H1AA  H1AA  H  0  0  N  N  N  28.179  -25.058   1.943   4.083  -0.546  -4.400  H1AA  5WB  28  
5WB  H1AB  H1AB  H  0  0  N  N  N  29.645  -24.077   2.285   2.430  -0.404  -3.756  H1AB  5WB  29  
5WB  H1B   H1B   H  0  1  N  N  N  34.498  -28.970  -1.746   2.968  -0.932   4.410  H1B   5WB  30  
5WB  H1BA  H1BA  H  0  0  N  N  N  34.496  -27.875  -0.322   2.688   0.621   3.588  H1BA  5WB  31  
5WB  H1BB  H1BB  H  0  0  N  N  N  33.749  -29.505  -0.204   1.525  -0.712   3.391  H1BB  5WB  32  
5WB  H1C   H1C   H  0  1  N  N  N  31.966  -24.024  -2.481   6.674  -2.023   0.349  H1C   5WB  33  
5WB  H1CA  H1CA  H  0  0  N  N  N  31.385  -23.880  -0.787   6.211  -0.553  -0.541  H1CA  5WB  34  
5WB  H1CB  H1CB  H  0  0  N  N  N  32.935  -24.717  -1.137   5.985  -0.633   1.222  H1CB  5WB  35  
5WB  H1D   H1D   H  0  1  N  N  N  31.185  -31.860   2.101  -1.088   4.106   0.238  H1D   5WB  36  
5WB  H1DA  H1DA  H  0  0  N  N  N  29.650  -31.116   2.665   0.052   4.830   1.398  H1DA  5WB  37  
5WB  H1DB  H1DB  H  0  0  N  N  N  30.476  -30.474   1.204   0.525   4.625  -0.305  H1DB  5WB  38  
5WB  H1E   H1E   H  0  1  N  N  N  25.538  -29.416   1.085  -1.585  -2.490  -0.928  H1E   5WB  39  
5WB  H1EA  H1EA  H  0  0  N  N  N  26.892  -28.327   1.542  -1.131  -1.600   0.545  H1EA  5WB  40  
5WB  H1EB  H1EB  H  0  0  N  N  N  27.112  -30.109   1.606  -2.073  -3.105   0.669  H1EB  5WB  41  
5WB  HN1F  HN1F  H  0  0  N  N  N  22.341  -29.687   4.089  -6.695  -2.988   0.090  HN1F  5WB  42  
5WB  HN1A  HN1A  H  0  0  N  N  N  22.684  -30.413   5.511  -7.526  -1.534  -0.049  HN1A  5WB  43  
5WB  HN1G  HN1G  H  0  0  N  N  N  26.565  -29.063   7.472  -5.237   2.518  -0.384  HN1G  5WB  44  
5WB  HN1B  HN1B  H  0  0  N  N  N  27.788  -29.756   6.641  -3.557   2.545  -0.368  HN1B  5WB  45  
5WB  H1J   H1J   H  0  1  N  N  N  29.493  -26.377   2.552   1.920   0.982  -2.274  H1J   5WB  46  
5WB  H1K   H1K   H  0  1  N  N  N  32.300  -29.256   1.071   1.386   0.797   1.953  H1K   5WB  47  
5WB  H1Z   H1Z   H  0  1  N  N  N  31.296  -28.135   4.056   0.482   2.517  -1.212  H1Z   5WB  48  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
5WB  C6   N1    DOUB  Y  N   1  
5WB  N1   C2    SING  Y  N   2  
5WB  C2   N1F   SING  N  N   3  
5WB  C2   N3    DOUB  Y  N   4  
5WB  C4   N3    SING  Y  N   5  
5WB  C5   C4    DOUB  Y  N   6  
5WB  C4   N1G   SING  N  N   7  
5WB  C6   C5    SING  Y  N   8  
5WB  C1H  C5    SING  N  N   9  
5WB  C1E  C6    SING  N  N  10  
5WB  O1N  C1A   SING  N  N  11  
5WB  C1A  H1A   SING  N  N  12  
5WB  C1A  H1AA  SING  N  N  13  
5WB  C1A  H1AB  SING  N  N  14  
5WB  O1O  C1B   SING  N  N  15  
5WB  C1B  H1B   SING  N  N  16  
5WB  C1B  H1BA  SING  N  N  17  
5WB  C1B  H1BB  SING  N  N  18  
5WB  O1P  C1C   SING  N  N  19  
5WB  C1C  H1C   SING  N  N  20  
5WB  C1C  H1CA  SING  N  N  21  
5WB  C1C  H1CB  SING  N  N  22  
5WB  C1D  O1Q   SING  N  N  23  
5WB  C1D  H1D   SING  N  N  24  
5WB  C1D  H1DA  SING  N  N  25  
5WB  C1D  H1DB  SING  N  N  26  
5WB  C1E  H1E   SING  N  N  27  
5WB  C1E  H1EA  SING  N  N  28  
5WB  C1E  H1EB  SING  N  N  29  
5WB  N1F  HN1F  SING  N  N  30  
5WB  N1F  HN1A  SING  N  N  31  
5WB  N1G  HN1G  SING  N  N  32  
5WB  N1G  HN1B  SING  N  N  33  
5WB  C1I  C1H   TRIP  N  N  34  
5WB  C1Z  C1I   SING  N  N  35  
5WB  C1W  C1J   DOUB  Y  N  36  
5WB  C1J  C1U   SING  Y  N  37  
5WB  C1J  H1J   SING  N  N  38  
5WB  C1X  C1K   SING  Y  N  39  
5WB  C1K  C1U   DOUB  Y  N  40  
5WB  C1K  H1K   SING  N  N  41  
5WB  O1N  C1W   SING  N  N  42  
5WB  O1O  C1X   SING  N  N  43  
5WB  O1P  C1Y   SING  N  N  44  
5WB  O1Q  C1Z   SING  N  N  45  
5WB  C1U  C1Z   SING  N  N  46  
5WB  C1Y  C1W   SING  Y  N  47  
5WB  C1Y  C1X   DOUB  Y  N  48  
5WB  C1Z  H1Z   SING  N  N  49  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
5WB  SMILES            ACDLabs               11.02  "C(#CC(OC)c1cc(OC)c(OC)c(OC)c1)c2c(nc(nc2C)N)N"  
5WB  SMILES_CANONICAL  CACTVS                3.352  "CO[C@H](C#Cc1c(C)nc(N)nc1N)c2cc(OC)c(OC)c(OC)c2"  
5WB  SMILES            CACTVS                3.352  "CO[CH](C#Cc1c(C)nc(N)nc1N)c2cc(OC)c(OC)c(OC)c2"  
5WB  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.0  "Cc1c(c(nc(n1)N)N)C#C[C@H](c2cc(c(c(c2)OC)OC)OC)OC"  
5WB  SMILES            "OpenEye OEToolkits"  1.7.0  "Cc1c(c(nc(n1)N)N)C#CC(c2cc(c(c(c2)OC)OC)OC)OC"  
5WB  InChI             InChI                 1.03   "InChI=1S/C18H22N4O4/c1-10-12(17(19)22-18(20)21-10)6-7-13(23-2)11-8-14(24-3)16(26-5)15(9-11)25-4/h8-9,13H,1-5H3,(H4,19,20,21,22)/t13-/m1/s1"  
5WB  InChIKey          InChI                 1.03   WGUCJULKGMTPOP-CYBMUJFWSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
5WB  "SYSTEMATIC NAME"  ACDLabs               11.02  "5-[(3S)-3-methoxy-3-(3,4,5-trimethoxyphenyl)prop-1-yn-1-yl]-6-methylpyrimidine-2,4-diamine"  
5WB  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.6.1  "5-[(3S)-3-methoxy-3-(3,4,5-trimethoxyphenyl)prop-1-ynyl]-6-methyl-pyrimidine-2,4-diamine"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
5WB  "Create component"      2009-09-22  RCSB  
5WB  "Modify aromatic_flag"  2011-06-04  RCSB  
5WB  "Modify descriptor"     2011-06-04  RCSB  
5WB  "Modify synonyms"       2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     5WB
_pdbx_chem_comp_synonyms.name        "(S)-2,4-diamino-5-(3-methoxy-3-(3,4,5-trimethoxyphenyl)prop-1-ynyl)-6-methylpyrimidine"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
