data_5BB
# 
_chem_comp.id                                    5BB 
_chem_comp.name                                  "5-bromo-2-{2-ethoxy-5-[(4-methylpiperazin-1-yl)sulfonyl]phenyl}-6-octylpyrimidin-4(3H)-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H37 Br N4 O4 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-12-12 
_chem_comp.pdbx_modified_date                    2013-12-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        569.555 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5BB 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4IA0 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5BB CAU CAU C  0 1 N N N -24.983 20.724 23.129 -5.323 -0.284 -1.788 CAU 5BB 1  
5BB CAS CAS C  0 1 N N N -23.528 21.045 23.329 -6.613 -0.369 -2.610 CAS 5BB 2  
5BB NBG NBG N  0 1 N N N -22.822 19.968 23.963 -7.067 0.988  -2.945 NBG 5BB 3  
5BB CAC CAC C  0 1 N N N -21.387 19.817 23.832 -8.203 0.948  -3.875 CAC 5BB 4  
5BB CAT CAT C  0 1 N N N -23.431 19.541 25.191 -7.402 1.751  -1.735 CAT 5BB 5  
5BB CAV CAV C  0 1 N N N -24.883 19.182 24.997 -6.144 1.923  -0.878 CAV 5BB 6  
5BB NBH NBH N  0 1 N N N -25.682 20.162 24.276 -5.561 0.595  -0.633 NBH 5BB 7  
5BB SBI SBI S  0 1 N N N -27.335 20.212 23.926 -5.182 0.102  0.902  SBI 5BB 8  
5BB OAE OAE O  0 1 N N N -28.226 20.216 25.100 -5.997 0.866  1.781  OAE 5BB 9  
5BB OAF OAF O  0 1 N N N -27.653 21.368 23.110 -5.183 -1.318 0.879  OAF 5BB 10 
5BB CAZ CAZ C  0 1 Y N N -27.700 18.727 23.013 -3.519 0.594  1.212  CAZ 5BB 11 
5BB CAJ CAJ C  0 1 Y N N -28.043 18.833 21.648 -2.482 -0.257 0.896  CAJ 5BB 12 
5BB CAH CAH C  0 1 Y N N -27.619 17.484 23.631 -3.259 1.837  1.766  CAH 5BB 13 
5BB CAI CAI C  0 1 Y N N -27.901 16.318 22.902 -1.959 2.234  2.013  CAI 5BB 14 
5BB CBA CBA C  0 1 Y N N -28.240 16.423 21.540 -0.904 1.389  1.706  CBA 5BB 15 
5BB OAY OAY O  0 1 N N N -28.530 15.299 20.761 0.373  1.778  1.948  OAY 5BB 16 
5BB CAL CAL C  0 1 N N N -28.254 13.970 21.161 0.559  3.074  2.521  CAL 5BB 17 
5BB CAB CAB C  0 1 N N N -28.932 12.892 20.304 2.054  3.334  2.719  CAB 5BB 18 
5BB CBD CBD C  0 1 Y N N -28.306 17.687 20.921 -1.162 0.134  1.136  CBD 5BB 19 
5BB CBE CBE C  0 1 N N N -28.693 17.836 19.466 -0.048 -0.773 0.805  CBE 5BB 20 
5BB NAW NAW N  0 1 N N N -28.058 18.733 18.695 1.191  -0.395 1.051  NAW 5BB 21 
5BB NAX NAX N  0 1 N N N -29.693 17.079 18.976 -0.317 -1.992 0.256  NAX 5BB 22 
5BB CBF CBF C  0 1 N N N -30.079 17.191 17.687 0.699  -2.828 -0.048 CBF 5BB 23 
5BB OAD OAD O  0 1 N N N -31.116 16.371 17.218 0.478  -3.922 -0.540 OAD 5BB 24 
5BB CBC CBC C  0 1 N N N -29.439 18.121 16.855 2.020  -2.412 0.213  CBC 5BB 25 
5BB BR  BR  BR 0 0 N N N -30.019 18.278 15.007 3.482  -3.540 -0.194 BR  5BB 26 
5BB CBB CBB C  0 1 N N N -28.390 18.906 17.394 2.226  -1.183 0.768  CBB 5BB 27 
5BB CAR CAR C  0 1 N N N -27.608 19.968 16.586 3.628  -0.714 1.057  CAR 5BB 28 
5BB CAQ CAQ C  0 1 N N N -26.140 19.742 16.147 4.134  0.133  -0.112 CAQ 5BB 29 
5BB CAP CAP C  0 1 N N N -25.231 20.932 16.008 5.558  0.609  0.181  CAP 5BB 30 
5BB CAO CAO C  0 1 N N N -25.847 22.312 16.043 6.064  1.457  -0.988 CAO 5BB 31 
5BB CAN CAN C  0 1 N N N -25.220 23.395 15.203 7.488  1.933  -0.695 CAN 5BB 32 
5BB CAM CAM C  0 1 N N N -25.943 24.759 15.105 7.994  2.780  -1.864 CAM 5BB 33 
5BB CAK CAK C  0 1 N N N -27.256 24.844 14.377 9.418  3.256  -1.570 CAK 5BB 34 
5BB CAA CAA C  0 1 N N N -27.520 26.019 13.455 9.924  4.103  -2.740 CAA 5BB 35 
5BB H1  H1  H  0 1 N N N -25.496 21.655 22.847 -5.044 -1.279 -1.440 H1  5BB 36 
5BB H2  H2  H  0 1 N N N -25.056 20.000 22.304 -4.523 0.128  -2.404 H2  5BB 37 
5BB H3  H3  H  0 1 N N N -23.070 21.242 22.349 -6.424 -0.926 -3.527 H3  5BB 38 
5BB H4  H4  H  0 1 N N N -23.446 21.943 23.959 -7.383 -0.876 -2.028 H4  5BB 39 
5BB H6  H6  H  0 1 N N N -21.058 18.931 24.395 -9.030 0.407  -3.416 H6  5BB 40 
5BB H7  H7  H  0 1 N N N -21.127 19.694 22.770 -8.518 1.966  -4.106 H7  5BB 41 
5BB H8  H8  H  0 1 N N N -20.886 20.712 24.231 -7.903 0.444  -4.793 H8  5BB 42 
5BB H9  H9  H  0 1 N N N -22.893 18.659 25.568 -7.786 2.731  -2.019 H9  5BB 43 
5BB H10 H10 H  0 1 N N N -23.360 20.356 25.926 -8.161 1.215  -1.166 H10 5BB 44 
5BB H11 H11 H  0 1 N N N -25.333 19.044 25.991 -5.424 2.547  -1.406 H11 5BB 45 
5BB H12 H12 H  0 1 N N N -24.926 18.234 24.440 -6.408 2.390  0.071  H12 5BB 46 
5BB H13 H13 H  0 1 N N N -28.100 19.802 21.175 -2.689 -1.225 0.464  H13 5BB 47 
5BB H14 H14 H  0 1 N N N -27.339 17.416 24.672 -4.077 2.499  2.007  H14 5BB 48 
5BB H15 H15 H  0 1 N N N -27.858 15.351 23.381 -1.765 3.204  2.445  H15 5BB 49 
5BB H16 H16 H  0 1 N N N -28.594 13.847 22.200 0.144  3.829  1.853  H16 5BB 50 
5BB H17 H17 H  0 1 N N N -27.166 13.815 21.110 0.052  3.121  3.484  H17 5BB 51 
5BB H18 H18 H  0 1 N N N -28.663 11.896 20.686 2.196  4.322  3.156  H18 5BB 52 
5BB H19 H19 H  0 1 N N N -30.024 13.019 20.351 2.469  2.579  3.386  H19 5BB 53 
5BB H20 H20 H  0 1 N N N -28.596 12.988 19.261 2.562  3.286  1.755  H20 5BB 54 
5BB H21 H21 H  0 1 N N N -30.156 16.425 19.575 -1.234 -2.258 0.086  H21 5BB 55 
5BB H22 H22 H  0 1 N N N -27.611 20.884 17.196 3.631  -0.114 1.968  H22 5BB 56 
5BB H23 H23 H  0 1 N N N -28.183 20.140 15.664 4.280  -1.577 1.189  H23 5BB 57 
5BB H24 H24 H  0 1 N N N -26.169 19.242 15.168 4.132  -0.466 -1.023 H24 5BB 58 
5BB H25 H25 H  0 1 N N N -24.709 20.833 15.045 5.561  1.209  1.092  H25 5BB 59 
5BB H26 H26 H  0 1 N N N -25.821 22.654 17.088 6.062  0.857  -1.898 H26 5BB 60 
5BB H27 H27 H  0 1 N N N -25.128 23.001 14.180 7.490  2.532  0.216  H27 5BB 61 
5BB H28 H28 H  0 1 N N N -25.252 25.453 14.604 7.991  2.181  -2.774 H28 5BB 62 
5BB H29 H29 H  0 1 N N N -26.124 25.101 16.135 7.342  3.643  -1.996 H29 5BB 63 
5BB H30 H30 H  0 1 N N N -28.047 24.852 15.142 9.420  3.855  -0.660 H30 5BB 64 
5BB H31 H31 H  0 1 N N N -27.345 23.932 13.768 10.070 2.392  -1.439 H31 5BB 65 
5BB H32 H32 H  0 1 N N N -28.521 25.919 13.010 9.921  3.504  -3.650 H32 5BB 66 
5BB H33 H33 H  0 1 N N N -27.466 26.955 14.030 9.272  4.967  -2.872 H33 5BB 67 
5BB H34 H34 H  0 1 N N N -26.764 26.035 12.656 10.938 4.442  -2.531 H34 5BB 68 
5BB H5  H5  H  0 1 N N N -25.681 19.070 16.888 3.482  0.997  -0.244 H5  5BB 69 
5BB H35 H35 H  0 1 N N N -24.500 20.881 16.828 6.210  -0.254 0.313  H35 5BB 70 
5BB H36 H36 H  0 1 N N N -26.892 22.211 15.716 5.412  2.320  -1.120 H36 5BB 71 
5BB H37 H37 H  0 1 N N N -24.218 23.587 15.614 8.140  1.069  -0.563 H37 5BB 72 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5BB CAA CAK SING N N 1  
5BB CAK CAM SING N N 2  
5BB BR  CBC SING N N 3  
5BB CAM CAN SING N N 4  
5BB CAN CAO SING N N 5  
5BB CAP CAO SING N N 6  
5BB CAP CAQ SING N N 7  
5BB CAQ CAR SING N N 8  
5BB CAR CBB SING N N 9  
5BB CBC CBB DOUB N N 10 
5BB CBC CBF SING N N 11 
5BB OAD CBF DOUB N N 12 
5BB CBB NAW SING N N 13 
5BB CBF NAX SING N N 14 
5BB NAW CBE DOUB N N 15 
5BB NAX CBE SING N N 16 
5BB CBE CBD SING N N 17 
5BB CAB CAL SING N N 18 
5BB OAY CAL SING N N 19 
5BB OAY CBA SING N N 20 
5BB CBD CBA DOUB Y N 21 
5BB CBD CAJ SING Y N 22 
5BB CBA CAI SING Y N 23 
5BB CAJ CAZ DOUB Y N 24 
5BB CAI CAH DOUB Y N 25 
5BB CAZ CAH SING Y N 26 
5BB CAZ SBI SING N N 27 
5BB OAF SBI DOUB N N 28 
5BB CAU CAS SING N N 29 
5BB CAU NBH SING N N 30 
5BB CAS NBG SING N N 31 
5BB CAC NBG SING N N 32 
5BB SBI NBH SING N N 33 
5BB SBI OAE DOUB N N 34 
5BB NBG CAT SING N N 35 
5BB NBH CAV SING N N 36 
5BB CAV CAT SING N N 37 
5BB CAU H1  SING N N 38 
5BB CAU H2  SING N N 39 
5BB CAS H3  SING N N 40 
5BB CAS H4  SING N N 41 
5BB CAC H6  SING N N 42 
5BB CAC H7  SING N N 43 
5BB CAC H8  SING N N 44 
5BB CAT H9  SING N N 45 
5BB CAT H10 SING N N 46 
5BB CAV H11 SING N N 47 
5BB CAV H12 SING N N 48 
5BB CAJ H13 SING N N 49 
5BB CAH H14 SING N N 50 
5BB CAI H15 SING N N 51 
5BB CAL H16 SING N N 52 
5BB CAL H17 SING N N 53 
5BB CAB H18 SING N N 54 
5BB CAB H19 SING N N 55 
5BB CAB H20 SING N N 56 
5BB NAX H21 SING N N 57 
5BB CAR H22 SING N N 58 
5BB CAR H23 SING N N 59 
5BB CAQ H24 SING N N 60 
5BB CAP H25 SING N N 61 
5BB CAO H26 SING N N 62 
5BB CAN H27 SING N N 63 
5BB CAM H28 SING N N 64 
5BB CAM H29 SING N N 65 
5BB CAK H30 SING N N 66 
5BB CAK H31 SING N N 67 
5BB CAA H32 SING N N 68 
5BB CAA H33 SING N N 69 
5BB CAA H34 SING N N 70 
5BB CAQ H5  SING N N 71 
5BB CAP H35 SING N N 72 
5BB CAO H36 SING N N 73 
5BB CAN H37 SING N N 74 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5BB SMILES           ACDLabs              12.01 "O=S(=O)(c2cc(C1=NC(=C(Br)C(=O)N1)CCCCCCCC)c(OCC)cc2)N3CCN(C)CC3"                                                                                                             
5BB InChI            InChI                1.03  "InChI=1S/C25H37BrN4O4S/c1-4-6-7-8-9-10-11-21-23(26)25(31)28-24(27-21)20-18-19(12-13-22(20)34-5-2)35(32,33)30-16-14-29(3)15-17-30/h12-13,18H,4-11,14-17H2,1-3H3,(H,27,28,31)" 
5BB InChIKey         InChI                1.03  RHPCTAOHQBBFKL-UHFFFAOYSA-N                                                                                                                                                   
5BB SMILES_CANONICAL CACTVS               3.370 "CCCCCCCCC1=C(Br)C(=O)NC(=N1)c2cc(ccc2OCC)[S](=O)(=O)N3CCN(C)CC3"                                                                                                             
5BB SMILES           CACTVS               3.370 "CCCCCCCCC1=C(Br)C(=O)NC(=N1)c2cc(ccc2OCC)[S](=O)(=O)N3CCN(C)CC3"                                                                                                             
5BB SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CCCCCCCCC1=C(C(=O)NC(=N1)c2cc(ccc2OCC)S(=O)(=O)N3CCN(CC3)C)Br"                                                                                                               
5BB SMILES           "OpenEye OEToolkits" 1.7.6 "CCCCCCCCC1=C(C(=O)NC(=N1)c2cc(ccc2OCC)S(=O)(=O)N3CCN(CC3)C)Br"                                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
5BB "SYSTEMATIC NAME" ACDLabs              12.01 "5-bromo-2-{2-ethoxy-5-[(4-methylpiperazin-1-yl)sulfonyl]phenyl}-6-octylpyrimidin-4(3H)-one"   
5BB "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "5-bromanyl-2-[2-ethoxy-5-(4-methylpiperazin-1-yl)sulfonyl-phenyl]-4-octyl-1H-pyrimidin-6-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5BB "Create component" 2012-12-12 PDBJ 
5BB "Initial release"  2014-01-01 RCSB 
# 
