data_50B
# 
_chem_comp.id                                    50B 
_chem_comp.name                                  "13-diphenylalkyl Berberine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C36 H34 N O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2015-07-03 
_chem_comp.pdbx_modified_date                    2016-07-15 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        544.659 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     50B 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5CDB 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
50B O2  O1  O 0 1 N N N -3.144 -14.994 6.376 -2.349 -5.312 0.806  O2  50B 1  
50B C2  C1  C 0 1 Y N N -1.901 -15.570 6.232 -1.313 -4.517 0.475  C2  50B 2  
50B C3  C2  C 0 1 Y N N -1.966 -16.922 6.589 -1.108 -3.622 1.540  C3  50B 3  
50B O3  O2  O 0 1 N N N 6.461  -19.164 5.978 6.009  0.774  -0.777 O3  50B 4  
50B C4  C3  C 0 1 Y N N -0.690 -15.032 5.820 -0.505 -4.480 -0.651 C4  50B 5  
50B O4  O3  O 0 1 N N N 6.650  -21.940 5.620 5.936  3.139  0.602  O4  50B 6  
50B C5  C4  C 0 1 Y N N 0.434  -15.837 5.766 0.470  -3.499 -0.701 C5  50B 7  
50B C6  C5  C 0 1 Y N N 0.387  -17.179 6.095 0.643  -2.561 0.319  C6  50B 8  
50B C1  C6  C 0 1 N N N -3.963 -15.988 6.999 -2.517 -5.229 2.229  C1  50B 9  
50B O1  O4  O 0 1 N N N -3.257 -17.230 6.967 -2.017 -3.911 2.494  O1  50B 10 
50B C19 C7  C 0 1 N N N 7.042  -18.593 4.797 6.030  1.196  -2.143 C19 50B 11 
50B C18 C8  C 0 1 Y N N 5.316  -19.931 5.817 4.911  1.102  -0.048 C18 50B 12 
50B C13 C9  C 0 1 Y N N 4.070  -19.298 5.881 3.805  0.236  0.007  C13 50B 13 
50B C12 C10 C 0 1 Y N N 2.901  -20.046 5.804 2.653  0.614  0.749  C12 50B 14 
50B C15 C11 C 0 1 Y N N 2.996  -21.426 5.656 2.664  1.814  1.471  C15 50B 15 
50B C16 C12 C 0 1 Y N N 4.229  -22.060 5.596 3.753  2.635  1.411  C16 50B 16 
50B C17 C13 C 0 1 Y N N 5.401  -21.323 5.680 4.871  2.294  0.651  C17 50B 17 
50B C20 C14 C 0 1 N N N 6.878  -23.308 6.000 5.837  4.352  1.352  C20 50B 18 
50B C11 C15 C 0 1 Y N N 1.666  -19.384 5.868 1.543  -0.254 0.732  C11 50B 19 
50B C10 C16 C 0 1 Y N N 1.642  -17.985 6.015 1.660  -1.492 0.141  C10 50B 20 
50B N1  N1  N 1 1 Y N N 2.796  -17.302 6.089 2.753  -1.791 -0.586 N1  50B 21 
50B C14 C17 C 0 1 Y N N 3.986  -17.909 6.033 3.794  -0.996 -0.659 C14 50B 22 
50B C7  C18 C 0 1 Y N N -0.819 -17.716 6.528 -0.123 -2.650 1.487  C7  50B 23 
50B C8  C19 C 0 1 N N N 1.731  -15.241 5.336 1.418  -3.459 -1.878 C8  50B 24 
50B C9  C20 C 0 1 N N N 2.785  -15.847 6.248 2.796  -3.045 -1.354 C9  50B 25 
50B C21 C21 C 0 1 N N N 0.381  -20.177 5.754 0.230  0.245  1.286  C21 50B 26 
50B C22 C22 C 0 1 N N N 0.103  -21.137 6.914 -0.515 1.030  0.204  C22 50B 27 
50B C23 C23 C 0 1 N N N -1.401 -21.366 7.036 -1.845 1.536  0.765  C23 50B 28 
50B C24 C24 C 0 1 N N N -2.069 -21.935 5.776 -2.590 2.320  -0.317 C24 50B 29 
50B C25 C25 C 0 1 Y N N -3.538 -21.603 5.793 -2.960 1.393  -1.446 C25 50B 30 
50B C26 C26 C 0 1 Y N N -3.933 -20.262 5.786 -2.619 1.716  -2.746 C26 50B 31 
50B C27 C27 C 0 1 Y N N -5.281 -19.903 5.807 -2.958 0.865  -3.781 C27 50B 32 
50B C28 C28 C 0 1 Y N N -6.279 -20.883 5.833 -3.638 -0.309 -3.516 C28 50B 33 
50B C29 C29 C 0 1 Y N N -5.902 -22.230 5.842 -3.977 -0.633 -2.216 C29 50B 34 
50B C30 C30 C 0 1 Y N N -4.544 -22.581 5.815 -3.634 0.216  -1.180 C30 50B 35 
50B C31 C31 C 0 1 Y N N -1.725 -23.387 5.684 -3.841 2.922  0.269  C31 50B 36 
50B C32 C32 C 0 1 Y N N -2.311 -24.346 6.518 -4.097 4.271  0.114  C32 50B 37 
50B C33 C33 C 0 1 Y N N -1.975 -25.687 6.404 -5.245 4.823  0.653  C33 50B 38 
50B C34 C34 C 0 1 Y N N -1.029 -26.092 5.469 -6.136 4.025  1.346  C34 50B 39 
50B C35 C35 C 0 1 Y N N -0.430 -25.142 4.646 -5.879 2.676  1.502  C35 50B 40 
50B C36 C36 C 0 1 Y N N -0.774 -23.797 4.748 -4.735 2.123  0.958  C36 50B 41 
50B H1  H1  H 0 1 N N N -0.625 -13.990 5.543 -0.637 -5.186 -1.459 H1  50B 42 
50B H2  H2  H 0 1 N N N -4.168 -15.702 8.041 -3.569 -5.311 2.504  H2  50B 43 
50B H3  H3  H 0 1 N N N 7.937  -18.015 5.071 5.963  2.283  -2.188 H3  50B 44 
50B H4  H4  H 0 1 N N N 7.324  -19.397 4.101 6.960  0.870  -2.609 H4  50B 45 
50B H5  H5  H 0 1 N N N 6.311  -17.929 4.313 5.185  0.756  -2.672 H5  50B 46 
50B H6  H6  H 0 1 N N N 2.093  -22.015 5.587 1.828  2.108  2.088  H6  50B 47 
50B H7  H7  H 0 1 N N N 4.276  -23.133 5.483 3.744  3.566  1.959  H7  50B 48 
50B H8  H8  H 0 1 N N N 7.941  -23.555 5.862 5.698  4.116  2.407  H8  50B 49 
50B H9  H9  H 0 1 N N N 6.604  -23.446 7.056 6.751  4.932  1.226  H9  50B 50 
50B H10 H10 H 0 1 N N N 6.264  -23.970 5.372 4.986  4.932  0.994  H10 50B 51 
50B H11 H11 H 0 1 N N N 4.890  -17.323 6.106 4.654  -1.296 -1.242 H11 50B 52 
50B H12 H12 H 0 1 N N N -0.870 -18.755 6.819 0.063  -2.032 2.353  H12 50B 53 
50B H13 H13 H 0 1 N N N 1.940  -15.495 4.286 1.480  -4.444 -2.332 H13 50B 54 
50B H14 H14 H 0 1 N N N 1.707  -14.147 5.451 1.070  -2.728 -2.603 H14 50B 55 
50B H15 H15 H 0 1 N N N 3.773  -15.443 5.984 3.467  -2.918 -2.200 H15 50B 56 
50B H16 H16 H 0 1 N N N 2.553  -15.595 7.293 3.176  -3.838 -0.711 H16 50B 57 
50B H17 H17 H 0 1 N N N -0.455 -19.464 5.694 -0.377 -0.603 1.602  H17 50B 58 
50B H18 H18 H 0 1 N N N 0.426  -20.767 4.827 0.419  0.895  2.141  H18 50B 59 
50B H19 H19 H 0 1 N N N 0.606  -22.097 6.724 0.092  1.878  -0.112 H19 50B 60 
50B H20 H20 H 0 1 N N N 0.485  -20.702 7.849 -0.704 0.380  -0.651 H20 50B 61 
50B H21 H21 H 0 1 N N N -1.876 -20.402 7.270 -2.452 0.687  1.081  H21 50B 62 
50B H22 H22 H 0 1 N N N -1.574 -22.070 7.863 -1.656 2.185  1.620  H22 50B 63 
50B H23 H23 H 0 1 N N N -1.621 -21.427 4.909 -1.947 3.116  -0.696 H23 50B 64 
50B H24 H24 H 0 1 N N N -3.180 -19.488 5.764 -2.088 2.634  -2.953 H24 50B 65 
50B H25 H25 H 0 1 N N N -5.557 -18.859 5.803 -2.693 1.118  -4.797 H25 50B 66 
50B H26 H26 H 0 1 N N N -7.322 -20.604 5.846 -3.903 -0.974 -4.325 H26 50B 67 
50B H27 H27 H 0 1 N N N -6.658 -23.001 5.870 -4.509 -1.550 -2.009 H27 50B 68 
50B H28 H28 H 0 1 N N N -4.267 -23.625 5.811 -3.897 -0.039 -0.164 H28 50B 69 
50B H29 H29 H 0 1 N N N -3.034 -24.038 7.259 -3.401 4.894  -0.427 H29 50B 70 
50B H30 H30 H 0 1 N N N -2.449 -26.418 7.043 -5.445 5.877  0.532  H30 50B 71 
50B H31 H31 H 0 1 N N N -0.761 -27.135 5.382 -7.032 4.456  1.767  H31 50B 72 
50B H32 H32 H 0 1 N N N 0.309  -25.452 3.921 -6.577 2.052  2.039  H32 50B 73 
50B H33 H33 H 0 1 N N N -0.305 -23.070 4.102 -4.534 1.069  1.079  H33 50B 74 
50B H34 H34 H 0 1 N N N -4.912 -16.085 6.452 -1.921 -5.986 2.740  H34 50B 75 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
50B C35 C36 DOUB Y N 1  
50B C35 C34 SING Y N 2  
50B C36 C31 SING Y N 3  
50B C19 O3  SING N N 4  
50B C8  C5  SING N N 5  
50B C8  C9  SING N N 6  
50B C34 C33 DOUB Y N 7  
50B C16 C15 SING Y N 8  
50B C16 C17 DOUB Y N 9  
50B O4  C17 SING N N 10 
50B O4  C20 SING N N 11 
50B C15 C12 DOUB Y N 12 
50B C17 C18 SING Y N 13 
50B C31 C24 SING N N 14 
50B C31 C32 DOUB Y N 15 
50B C21 C11 SING N N 16 
50B C21 C22 SING N N 17 
50B C5  C4  SING Y N 18 
50B C5  C6  DOUB Y N 19 
50B C24 C25 SING N N 20 
50B C24 C23 SING N N 21 
50B C26 C25 DOUB Y N 22 
50B C26 C27 SING Y N 23 
50B C25 C30 SING Y N 24 
50B C12 C11 SING Y N 25 
50B C12 C13 SING Y N 26 
50B C27 C28 DOUB Y N 27 
50B C30 C29 DOUB Y N 28 
50B C18 C13 DOUB Y N 29 
50B C18 O3  SING N N 30 
50B C4  C2  DOUB Y N 31 
50B C28 C29 SING Y N 32 
50B C11 C10 DOUB Y N 33 
50B C13 C14 SING Y N 34 
50B C10 N1  SING Y N 35 
50B C10 C6  SING N N 36 
50B C14 N1  DOUB Y N 37 
50B N1  C9  SING N N 38 
50B C6  C7  SING Y N 39 
50B C2  O2  SING N N 40 
50B C2  C3  SING Y N 41 
50B O2  C1  SING N N 42 
50B C33 C32 SING Y N 43 
50B C7  C3  DOUB Y N 44 
50B C3  O1  SING N N 45 
50B C22 C23 SING N N 46 
50B O1  C1  SING N N 47 
50B C4  H1  SING N N 48 
50B C1  H2  SING N N 49 
50B C19 H3  SING N N 50 
50B C19 H4  SING N N 51 
50B C19 H5  SING N N 52 
50B C15 H6  SING N N 53 
50B C16 H7  SING N N 54 
50B C20 H8  SING N N 55 
50B C20 H9  SING N N 56 
50B C20 H10 SING N N 57 
50B C14 H11 SING N N 58 
50B C7  H12 SING N N 59 
50B C8  H13 SING N N 60 
50B C8  H14 SING N N 61 
50B C9  H15 SING N N 62 
50B C9  H16 SING N N 63 
50B C21 H17 SING N N 64 
50B C21 H18 SING N N 65 
50B C22 H19 SING N N 66 
50B C22 H20 SING N N 67 
50B C23 H21 SING N N 68 
50B C23 H22 SING N N 69 
50B C24 H23 SING N N 70 
50B C26 H24 SING N N 71 
50B C27 H25 SING N N 72 
50B C28 H26 SING N N 73 
50B C29 H27 SING N N 74 
50B C30 H28 SING N N 75 
50B C32 H29 SING N N 76 
50B C33 H30 SING N N 77 
50B C34 H31 SING N N 78 
50B C35 H32 SING N N 79 
50B C36 H33 SING N N 80 
50B C1  H34 SING N N 81 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
50B SMILES           ACDLabs              12.01 "O1COc2c1cc5c(c2)c4c(c3c(c(OC)c(OC)cc3)c[n+]4CC5)CCCC(c6ccccc6)c7ccccc7" 
50B InChI            InChI                1.03  
"InChI=1S/C36H34NO4/c1-38-32-17-16-28-29(15-9-14-27(24-10-5-3-6-11-24)25-12-7-4-8-13-25)35-30-21-34-33(40-23-41-34)20-26(30)18-19-37(35)22-31(28)36(32)39-2/h3-8,10-13,16-17,20-22,27H,9,14-15,18-19,23H2,1-2H3/q+1" 
50B InChIKey         InChI                1.03  GTWMZDSMZWCFBR-UHFFFAOYSA-N 
50B SMILES_CANONICAL CACTVS               3.385 "COc1ccc2c(CCCC(c3ccccc3)c4ccccc4)c5c6cc7OCOc7cc6CC[n+]5cc2c1OC" 
50B SMILES           CACTVS               3.385 "COc1ccc2c(CCCC(c3ccccc3)c4ccccc4)c5c6cc7OCOc7cc6CC[n+]5cc2c1OC" 
50B SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "COc1ccc2c(c1OC)c[n+]3c(c2CCCC(c4ccccc4)c5ccccc5)-c6cc7c(cc6CC3)OCO7" 
50B SMILES           "OpenEye OEToolkits" 1.9.2 "COc1ccc2c(c1OC)c[n+]3c(c2CCCC(c4ccccc4)c5ccccc5)-c6cc7c(cc6CC3)OCO7" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
50B "SYSTEMATIC NAME" ACDLabs 12.01 "13-(4,4-diphenylbutyl)-9,10-dimethoxy-5,6-dihydro[1,3]dioxolo[4,5-g]isoquinolino[3,2-a]isoquinolin-7-ium" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
50B "Create component" 2015-07-03 RCSB 
50B "Initial release"  2016-07-20 RCSB 
# 
