data_XVA
# 
_chem_comp.id                                    XVA 
_chem_comp.name                                  "4-(difluoromethyl)-6-(2-{5-[2-(dimethylamino)ethyl]-2,3-difluorophenyl}ethyl)pyridin-2-amine" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C18 H21 F4 N3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-12-13 
_chem_comp.pdbx_modified_date                    2023-10-06 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        355.373 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     XVA 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8FGM 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
XVA C02 C1  C 0 1 Y N N -28.711 8.469  -37.376 -4.429 -1.321 0.657  C02 XVA 1  
XVA C03 C2  C 0 1 Y N N -29.248 9.157  -38.481 -5.109 -0.127 0.436  C03 XVA 2  
XVA C04 C3  C 0 1 Y N N -30.488 8.743  -38.960 -4.423 0.948  -0.099 C04 XVA 3  
XVA C05 C4  C 0 1 Y N N -31.141 7.680  -38.343 -3.076 0.793  -0.397 C05 XVA 4  
XVA C06 C5  C 0 1 Y N N -30.580 7.033  -37.251 -2.465 -0.420 -0.152 C06 XVA 5  
XVA C07 C6  C 0 1 N N N -31.133 9.388  -40.137 -5.123 2.259  -0.354 C07 XVA 6  
XVA C11 C7  C 0 1 Y N N -30.631 3.266  -36.813 1.202  -1.247 0.454  C11 XVA 7  
XVA C12 C8  C 0 1 Y N N -29.773 2.330  -37.396 1.635  -2.385 -0.204 C12 XVA 8  
XVA C13 C9  C 0 1 Y N N -29.760 1.007  -36.954 2.980  -2.542 -0.503 C13 XVA 9  
XVA C14 C10 C 0 1 Y N N -30.612 0.606  -35.924 3.886  -1.559 -0.144 C14 XVA 10 
XVA C15 C11 C 0 1 Y N N -31.486 1.519  -35.340 3.451  -0.424 0.512  C15 XVA 11 
XVA C16 C12 C 0 1 Y N N -31.490 2.849  -35.786 2.110  -0.268 0.812  C16 XVA 12 
XVA C21 C13 C 0 1 N N N -31.251 5.846  -36.588 -1.003 -0.595 -0.473 C21 XVA 13 
XVA C22 C14 C 0 1 N N N -30.593 4.693  -37.359 -0.260 -1.073 0.776  C22 XVA 14 
XVA C23 C15 C 0 1 N N N -32.396 1.056  -34.213 4.439  0.645  0.904  C23 XVA 15 
XVA C24 C16 C 0 1 N N N -33.882 1.202  -34.552 4.567  1.661  -0.233 C24 XVA 16 
XVA C26 C17 C 0 1 N N N -35.993 2.214  -33.921 5.858  3.561  -0.998 C26 XVA 17 
XVA C27 C18 C 0 1 N N N -34.766 0.973  -32.277 5.025  3.500  1.275  C27 XVA 18 
XVA F08 F1  F 0 1 N N N -30.229 10.127 -40.863 -4.504 3.270  0.388  F08 XVA 19 
XVA F09 F2  F 0 1 N N N -31.632 8.393  -40.937 -5.050 2.569  -1.717 F09 XVA 20 
XVA F12 F3  F 0 1 N N N -28.946 2.709  -38.397 0.749  -3.343 -0.553 F12 XVA 21 
XVA F13 F4  F 0 1 N N N -28.927 0.103  -37.523 3.405  -3.652 -1.145 F13 XVA 22 
XVA N01 N1  N 0 1 Y N N -29.385 7.453  -36.804 -3.143 -1.427 0.365  N01 XVA 23 
XVA N02 N2  N 0 1 N N N -27.504 8.795  -36.848 -5.106 -2.409 1.195  N02 XVA 24 
XVA N25 N3  N 0 1 N N N -34.644 1.848  -33.456 5.529  2.703  0.148  N25 XVA 25 
XVA H1  H1  H 0 1 N N N -28.717 9.977  -38.941 -6.158 -0.041 0.679  H1  XVA 26 
XVA H2  H2  H 0 1 N N N -32.099 7.354  -38.720 -2.512 1.613  -0.817 H2  XVA 27 
XVA H3  H3  H 0 1 N N N -31.949 10.033 -39.779 -6.168 2.176  -0.056 H3  XVA 28 
XVA H4  H4  H 0 1 N N N -30.593 -0.417 -35.578 4.934  -1.680 -0.377 H4  XVA 29 
XVA H5  H5  H 0 1 N N N -32.163 3.561  -35.332 1.772  0.620  1.324  H5  XVA 30 
XVA H6  H6  H 0 1 N N N -32.341 5.862  -36.732 -0.891 -1.332 -1.268 H6  XVA 31 
XVA H7  H7  H 0 1 N N N -31.024 5.798  -35.513 -0.586 0.358  -0.801 H7  XVA 32 
XVA H8  H8  H 0 1 N N N -29.531 4.957  -37.473 -0.676 -2.025 1.103  H8  XVA 33 
XVA H9  H9  H 0 1 N N N -31.072 4.663  -38.349 -0.371 -0.335 1.570  H9  XVA 34 
XVA H10 H10 H 0 1 N N N -32.186 -0.003 -34.004 4.090  1.149  1.805  H10 XVA 35 
XVA H11 H11 H 0 1 N N N -32.179 1.656  -33.317 5.410  0.189  1.095  H11 XVA 36 
XVA H12 H12 H 0 1 N N N -33.980 1.814  -35.461 4.915  1.157  -1.134 H12 XVA 37 
XVA H13 H13 H 0 1 N N N -34.304 0.203  -34.736 3.595  2.117  -0.424 H13 XVA 38 
XVA H14 H14 H 0 1 N N N -36.547 2.692  -33.100 4.950  4.041  -1.364 H14 XVA 39 
XVA H15 H15 H 0 1 N N N -35.912 2.915  -34.765 6.572  4.324  -0.688 H15 XVA 40 
XVA H16 H16 H 0 1 N N N -36.527 1.309  -34.246 6.295  2.955  -1.792 H16 XVA 41 
XVA H17 H17 H 0 1 N N N -35.336 1.492  -31.492 4.856  2.849  2.133  H17 XVA 42 
XVA H18 H18 H 0 1 N N N -35.289 0.048  -32.560 5.757  4.264  1.536  H18 XVA 43 
XVA H19 H19 H 0 1 N N N -33.763 0.726  -31.899 4.087  3.977  0.991  H19 XVA 44 
XVA H20 H20 H 0 1 N N N -27.303 8.191  -36.076 -4.636 -3.242 1.355  H20 XVA 45 
XVA H21 H21 H 0 1 N N N -26.796 8.690  -37.546 -6.049 -2.336 1.411  H21 XVA 46 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
XVA F09 C07 SING N N 1  
XVA F08 C07 SING N N 2  
XVA C07 C04 SING N N 3  
XVA C04 C03 DOUB Y N 4  
XVA C04 C05 SING Y N 5  
XVA C03 C02 SING Y N 6  
XVA F12 C12 SING N N 7  
XVA C05 C06 DOUB Y N 8  
XVA F13 C13 SING N N 9  
XVA C12 C13 DOUB Y N 10 
XVA C12 C11 SING Y N 11 
XVA C02 N02 SING N N 12 
XVA C02 N01 DOUB Y N 13 
XVA C22 C11 SING N N 14 
XVA C22 C21 SING N N 15 
XVA C06 N01 SING Y N 16 
XVA C06 C21 SING N N 17 
XVA C13 C14 SING Y N 18 
XVA C11 C16 DOUB Y N 19 
XVA C14 C15 DOUB Y N 20 
XVA C16 C15 SING Y N 21 
XVA C15 C23 SING N N 22 
XVA C24 C23 SING N N 23 
XVA C24 N25 SING N N 24 
XVA C26 N25 SING N N 25 
XVA N25 C27 SING N N 26 
XVA C03 H1  SING N N 27 
XVA C05 H2  SING N N 28 
XVA C07 H3  SING N N 29 
XVA C14 H4  SING N N 30 
XVA C16 H5  SING N N 31 
XVA C21 H6  SING N N 32 
XVA C21 H7  SING N N 33 
XVA C22 H8  SING N N 34 
XVA C22 H9  SING N N 35 
XVA C23 H10 SING N N 36 
XVA C23 H11 SING N N 37 
XVA C24 H12 SING N N 38 
XVA C24 H13 SING N N 39 
XVA C26 H14 SING N N 40 
XVA C26 H15 SING N N 41 
XVA C26 H16 SING N N 42 
XVA C27 H17 SING N N 43 
XVA C27 H18 SING N N 44 
XVA C27 H19 SING N N 45 
XVA N02 H20 SING N N 46 
XVA N02 H21 SING N N 47 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
XVA SMILES           ACDLabs              12.01 "FC(F)c1cc(CCc2cc(CCN(C)C)cc(F)c2F)nc(N)c1"                                                                                     
XVA InChI            InChI                1.06  "InChI=1S/C18H21F4N3/c1-25(2)6-5-11-7-12(17(20)15(19)8-11)3-4-14-9-13(18(21)22)10-16(23)24-14/h7-10,18H,3-6H2,1-2H3,(H2,23,24)" 
XVA InChIKey         InChI                1.06  MBNBALAHMQJWSW-UHFFFAOYSA-N                                                                                                     
XVA SMILES_CANONICAL CACTVS               3.385 "CN(C)CCc1cc(F)c(F)c(CCc2cc(cc(N)n2)C(F)F)c1"                                                                                   
XVA SMILES           CACTVS               3.385 "CN(C)CCc1cc(F)c(F)c(CCc2cc(cc(N)n2)C(F)F)c1"                                                                                   
XVA SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(C)CCc1cc(c(c(c1)F)F)CCc2cc(cc(n2)N)C(F)F"                                                                                   
XVA SMILES           "OpenEye OEToolkits" 2.0.7 "CN(C)CCc1cc(c(c(c1)F)F)CCc2cc(cc(n2)N)C(F)F"                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
XVA "SYSTEMATIC NAME" ACDLabs              12.01 "4-(difluoromethyl)-6-(2-{5-[2-(dimethylamino)ethyl]-2,3-difluorophenyl}ethyl)pyridin-2-amine"             
XVA "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-[bis(fluoranyl)methyl]-6-[2-[5-[2-(dimethylamino)ethyl]-2,3-bis(fluoranyl)phenyl]ethyl]pyridin-2-amine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
XVA "Create component" 2022-12-13 RCSB 
XVA "Initial release"  2023-10-11 RCSB 
# 
