data_XTA
#

_chem_comp.id                                   XTA
_chem_comp.name                                 "(1-{[2-(3,5-dichlorophenyl)-6-{[2-(4-methylpiperazin-1-yl)pyrimidin-5-yl]oxy}pyridin-4-yl]methyl}piperidin-4-yl)acetic acid"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C28 H32 Cl2 N6 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-01-12
_chem_comp.pdbx_modified_date                   2022-01-07
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       571.498
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    XTA
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7LCU
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
XTA  C10  C1   C   0  1  Y  N  N  -67.369  -34.890   98.762  -2.398  -2.300   2.309  C10  XTA   1  
XTA  C11  C2   C   0  1  Y  N  N  -67.229  -36.258   98.648  -1.328  -2.211   1.425  C11  XTA   2  
XTA  C13  C3   C   0  1  Y  N  N  -65.000  -36.427   97.716   0.556  -0.866   1.681  C13  XTA   3  
XTA  C14  C4   C   0  1  Y  N  N  -63.732  -36.857   98.066   1.893  -0.713   2.025  C14  XTA   4  
XTA  C15  C5   C   0  1  Y  N  N  -62.675  -36.468   97.257   2.513   0.508   1.814  C15  XTA   5  
XTA  C16  C6   C   0  1  N  N  N  -61.264  -36.893   97.581   3.962   0.709   2.176  C16  XTA   6  
XTA  C18  C7   C   0  1  N  N  N  -59.322  -38.169   96.942   6.199   0.770   1.253  C18  XTA   7  
XTA  C19  C8   C   0  1  N  N  N  -58.756  -39.252   96.035   7.017   0.530  -0.018  C19  XTA   8  
XTA  C20  C9   C   0  1  N  N  N  -59.468  -40.578   96.223   6.951  -0.954  -0.389  C20  XTA   9  
XTA  C21  C10  C   0  1  N  N  N  -58.936  -41.630   95.242   7.717  -1.189  -1.692  C21  XTA  10  
XTA  C22  C11  C   0  1  N  N  N  -59.391  -43.031   95.484   7.757  -2.665  -1.992  C22  XTA  11  
XTA  C25  C12  C   0  1  N  N  N  -60.963  -40.358   96.061   5.486  -1.361  -0.575  C25  XTA  12  
XTA  C26  C13  C   0  1  N  N  N  -61.483  -39.230   96.952   4.713  -1.067   0.712  C26  XTA  13  
XTA  C27  C14  C   0  1  Y  N  N  -62.939  -35.679   96.155   1.771   1.541   1.263  C27  XTA  14  
XTA  C28  C15  C   0  1  Y  N  N  -64.245  -35.291   95.886   0.435   1.321   0.941  C28  XTA  15  
XTA  C30  C16  C   0  1  Y  N  N  -64.587  -34.481   94.694  -0.369   2.419   0.350  C30  XTA  16  
XTA  C31  C17  C   0  1  Y  N  N  -65.719  -33.667   94.678  -1.735   2.248   0.137  C31  XTA  17  
XTA  C32  C18  C   0  1  Y  N  N  -66.020  -32.946   93.540  -2.479   3.273  -0.414  C32  XTA  18  
XTA  C34  C19  C   0  1  Y  N  N  -65.238  -33.005   92.408  -1.870   4.469  -0.753  C34  XTA  19  
XTA  C01  C20  C   0  1  N  N  N  -74.389  -32.973  100.815  -8.839  -2.050  -1.873  C01  XTA  20  
XTA  C03  C21  C   0  1  N  N  N  -73.119  -34.839  100.003  -6.591  -2.950  -1.889  C03  XTA  21  
XTA  C04  C22  C   0  1  N  N  N  -72.101  -35.297   98.980  -5.157  -2.699  -1.416  C04  XTA  22  
XTA  C06  C23  C   0  1  N  N  N  -71.018  -33.098   99.201  -6.004  -1.594   0.564  C06  XTA  23  
XTA  C07  C24  C   0  1  N  N  N  -72.079  -32.734  100.216  -7.438  -1.845   0.091  C07  XTA  24  
XTA  C08  C25  C   0  1  Y  N  N  -69.622  -35.127   98.957  -3.833  -2.503   0.521  C08  XTA  25  
XTA  C35  C26  C   0  1  Y  N  N  -64.129  -33.820   92.441  -0.513   4.644  -0.543  C35  XTA  26  
XTA  C37  C27  C   0  1  Y  N  N  -63.799  -34.560   93.550   0.239   3.626   0.012  C37  XTA  27  
XTA  C38  C28  C   0  1  Y  N  N  -68.382  -37.014   98.729  -1.589  -2.280   0.061  C38  XTA  28  
XTA  N02  N1   N   0  1  N  N  N  -73.326  -33.407   99.908  -7.466  -1.886  -1.378  N02  XTA  29  
XTA  N05  N2   N   0  1  N  N  N  -70.841  -34.551   99.127  -5.129  -2.658   0.053  N05  XTA  30  
XTA  N09  N3   N   0  1  Y  N  N  -68.562  -34.302   98.924  -3.621  -2.446   1.827  N09  XTA  31  
XTA  N17  N4   N   0  1  N  N  N  -60.756  -37.968   96.716   4.806   0.365   1.024  N17  XTA  32  
XTA  N29  N5   N   0  1  Y  N  N  -65.277  -35.676   96.658  -0.125   0.136   1.152  N29  XTA  33  
XTA  N39  N6   N   0  1  Y  N  N  -69.594  -36.465   98.866  -2.838  -2.428  -0.350  N39  XTA  34  
XTA  O12  O1   O   0  1  N  N  N  -65.980  -36.873   98.553  -0.057  -2.059   1.884  O12  XTA  35  
XTA  O23  O2   O   0  1  N  N  N  -59.250  -43.600   96.547   8.381  -3.110  -3.094  O23  XTA  36  
XTA  O24  O3   O   0  1  N  N  N  -59.946  -43.575   94.432   7.226  -3.449  -1.241  O24  XTA  37  
XTA  CL3  CL1  CL  0  0  N  N  N  -67.434  -31.930   93.527  -4.182   3.062  -0.680  CL3  XTA  38  
XTA  CL6  CL2  CL  0  0  N  N  N  -63.129  -33.937   91.026   0.244   6.146  -0.971  CL6  XTA  39  
XTA  H51  H1   H   0  1  N  N  N  -66.485  -34.271   98.719  -2.232  -2.254   3.375  H51  XTA  40  
XTA  H52  H2   H   0  1  N  N  N  -63.571  -37.474   98.938   2.444  -1.537   2.454  H52  XTA  41  
XTA  H53  H3   H   0  1  N  N  N  -61.238  -37.244   98.623   4.127   1.751   2.450  H53  XTA  42  
XTA  H54  H4   H   0  1  N  N  N  -60.605  -36.019   97.472   4.218   0.067   3.019  H54  XTA  43  
XTA  H55  H5   H   0  1  N  N  N  -59.164  -38.463   97.990   6.618   0.183   2.071  H55  XTA  44  
XTA  H56  H6   H   0  1  N  N  N  -58.794  -37.225   96.743   6.232   1.828   1.513  H56  XTA  45  
XTA  H57  H7   H   0  1  N  N  N  -57.689  -39.386   96.265   6.607   1.128  -0.832  H57  XTA  46  
XTA  H58  H8   H   0  1  N  N  N  -58.869  -38.933   94.988   8.054   0.816   0.157  H58  XTA  47  
XTA  H59  H9   H   0  1  N  N  N  -59.278  -40.934   97.246   7.396  -1.549   0.408  H59  XTA  48  
XTA  H60  H10  H   0  1  N  N  N  -57.837  -41.618   95.296   7.218  -0.666  -2.507  H60  XTA  49  
XTA  H61  H11  H   0  1  N  N  N  -59.256  -41.341   94.230   8.735  -0.812  -1.588  H61  XTA  50  
XTA  H64  H12  H   0  1  N  N  N  -61.172  -40.104   95.011   5.052  -0.793  -1.398  H64  XTA  51  
XTA  H63  H13  H   0  1  N  N  N  -61.488  -41.288   96.325   5.430  -2.426  -0.798  H63  XTA  52  
XTA  H66  H14  H   0  1  N  N  N  -62.551  -39.071   96.739   3.667  -1.342   0.579  H66  XTA  53  
XTA  H65  H15  H   0  1  N  N  N  -61.358  -39.522   98.005   5.139  -1.645   1.532  H65  XTA  54  
XTA  H67  H16  H   0  1  N  N  N  -62.135  -35.365   95.506   2.224   2.505   1.087  H67  XTA  55  
XTA  H68  H17  H   0  1  N  N  N  -66.355  -33.601   95.549  -2.211   1.315   0.401  H68  XTA  56  
XTA  H69  H18  H   0  1  N  N  N  -65.486  -32.433   91.526  -2.454   5.267  -1.187  H69  XTA  57  
XTA  H42  H19  H   0  1  N  N  N  -74.527  -31.885  100.725  -9.231  -3.013  -1.546  H42  XTA  58  
XTA  H40  H20  H   0  1  N  N  N  -75.327  -33.485  100.552  -9.466  -1.250  -1.480  H40  XTA  59  
XTA  H41  H21  H   0  1  N  N  N  -74.113  -33.223  101.850  -8.840  -2.010  -2.963  H41  XTA  60  
XTA  H43  H22  H   0  1  N  N  N  -74.073  -35.355   99.821  -6.619  -2.951  -2.979  H43  XTA  61  
XTA  H44  H23  H   0  1  N  N  N  -72.755  -35.086  101.011  -6.934  -3.914  -1.515  H44  XTA  62  
XTA  H45  H24  H   0  1  N  N  N  -72.504  -35.129   97.970  -4.511  -3.502  -1.770  H45  XTA  63  
XTA  H46  H25  H   0  1  N  N  N  -71.904  -36.370   99.123  -4.804  -1.747  -1.813  H46  XTA  64  
XTA  H48  H26  H   0  1  N  N  N  -70.065  -32.634   99.494  -5.661  -0.629   0.190  H48  XTA  65  
XTA  H47  H27  H   0  1  N  N  N  -71.321  -32.721   98.213  -5.976  -1.592   1.654  H47  XTA  66  
XTA  H50  H28  H   0  1  N  N  N  -71.741  -33.038  101.218  -7.791  -2.797   0.488  H50  XTA  67  
XTA  H49  H29  H   0  1  N  N  N  -72.240  -31.646  100.197  -8.084  -1.042   0.445  H49  XTA  68  
XTA  H70  H30  H   0  1  N  N  N  -62.930  -35.201   93.534   1.298   3.764   0.176  H70  XTA  69  
XTA  H71  H31  H   0  1  N  N  N  -68.302  -38.090   98.680  -0.782  -2.214  -0.654  H71  XTA  70  
XTA  H3   H34  H   0  1  N  N  N  -59.601  -44.480   96.484   8.380  -4.065  -3.244  H3   XTA  71  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
XTA  CL6  C35  SING  N  N   1  
XTA  C34  C35  DOUB  Y  N   2  
XTA  C34  C32  SING  Y  N   3  
XTA  C35  C37  SING  Y  N   4  
XTA  CL3  C32  SING  N  N   5  
XTA  C32  C31  DOUB  Y  N   6  
XTA  C37  C30  DOUB  Y  N   7  
XTA  O24  C22  DOUB  N  N   8  
XTA  C31  C30  SING  Y  N   9  
XTA  C30  C28  SING  N  N  10  
XTA  C21  C22  SING  N  N  11  
XTA  C21  C20  SING  N  N  12  
XTA  C22  O23  SING  N  N  13  
XTA  C28  C27  DOUB  Y  N  14  
XTA  C28  N29  SING  Y  N  15  
XTA  C19  C20  SING  N  N  16  
XTA  C19  C18  SING  N  N  17  
XTA  C25  C20  SING  N  N  18  
XTA  C25  C26  SING  N  N  19  
XTA  C27  C15  SING  Y  N  20  
XTA  N29  C13  DOUB  Y  N  21  
XTA  N17  C18  SING  N  N  22  
XTA  N17  C26  SING  N  N  23  
XTA  N17  C16  SING  N  N  24  
XTA  C15  C16  SING  N  N  25  
XTA  C15  C14  DOUB  Y  N  26  
XTA  C13  C14  SING  Y  N  27  
XTA  C13  O12  SING  N  N  28  
XTA  O12  C11  SING  N  N  29  
XTA  C11  C38  DOUB  Y  N  30  
XTA  C11  C10  SING  Y  N  31  
XTA  C38  N39  SING  Y  N  32  
XTA  C10  N09  DOUB  Y  N  33  
XTA  N39  C08  DOUB  Y  N  34  
XTA  N09  C08  SING  Y  N  35  
XTA  C08  N05  SING  N  N  36  
XTA  C04  N05  SING  N  N  37  
XTA  C04  C03  SING  N  N  38  
XTA  N05  C06  SING  N  N  39  
XTA  C06  C07  SING  N  N  40  
XTA  N02  C03  SING  N  N  41  
XTA  N02  C07  SING  N  N  42  
XTA  N02  C01  SING  N  N  43  
XTA  C10  H51  SING  N  N  44  
XTA  C14  H52  SING  N  N  45  
XTA  C16  H53  SING  N  N  46  
XTA  C16  H54  SING  N  N  47  
XTA  C18  H55  SING  N  N  48  
XTA  C18  H56  SING  N  N  49  
XTA  C19  H57  SING  N  N  50  
XTA  C19  H58  SING  N  N  51  
XTA  C20  H59  SING  N  N  52  
XTA  C21  H60  SING  N  N  53  
XTA  C21  H61  SING  N  N  54  
XTA  C25  H64  SING  N  N  55  
XTA  C25  H63  SING  N  N  56  
XTA  C26  H66  SING  N  N  57  
XTA  C26  H65  SING  N  N  58  
XTA  C27  H67  SING  N  N  59  
XTA  C31  H68  SING  N  N  60  
XTA  C34  H69  SING  N  N  61  
XTA  C01  H42  SING  N  N  62  
XTA  C01  H40  SING  N  N  63  
XTA  C01  H41  SING  N  N  64  
XTA  C03  H43  SING  N  N  65  
XTA  C03  H44  SING  N  N  66  
XTA  C04  H45  SING  N  N  67  
XTA  C04  H46  SING  N  N  68  
XTA  C06  H48  SING  N  N  69  
XTA  C06  H47  SING  N  N  70  
XTA  C07  H50  SING  N  N  71  
XTA  C07  H49  SING  N  N  72  
XTA  C37  H70  SING  N  N  73  
XTA  C38  H71  SING  N  N  74  
XTA  O23  H3   SING  N  N  75  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
XTA  SMILES            ACDLabs               12.01  "c2nc(N1CCN(C)CC1)ncc2Oc4cc(CN3CCC(CC(O)=O)CC3)cc(n4)c5cc(cc(c5)Cl)Cl"  
XTA  InChI             InChI                 1.03   "InChI=1S/C28H32Cl2N6O3/c1-34-6-8-36(9-7-34)28-31-16-24(17-32-28)39-26-11-20(18-35-4-2-19(3-5-35)12-27(37)38)10-25(33-26)21-13-22(29)15-23(30)14-21/h10-11,13-17,19H,2-9,12,18H2,1H3,(H,37,38)"  
XTA  InChIKey          InChI                 1.03   AZEJIKZNBHEXCM-UHFFFAOYSA-N  
XTA  SMILES_CANONICAL  CACTVS                3.385  "CN1CCN(CC1)c2ncc(Oc3cc(CN4CCC(CC4)CC(O)=O)cc(n3)c5cc(Cl)cc(Cl)c5)cn2"  
XTA  SMILES            CACTVS                3.385  "CN1CCN(CC1)c2ncc(Oc3cc(CN4CCC(CC4)CC(O)=O)cc(n3)c5cc(Cl)cc(Cl)c5)cn2"  
XTA  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CN1CCN(CC1)c2ncc(cn2)Oc3cc(cc(n3)c4cc(cc(c4)Cl)Cl)CN5CCC(CC5)CC(=O)O"  
XTA  SMILES            "OpenEye OEToolkits"  2.0.7  "CN1CCN(CC1)c2ncc(cn2)Oc3cc(cc(n3)c4cc(cc(c4)Cl)Cl)CN5CCC(CC5)CC(=O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
XTA  "SYSTEMATIC NAME"  ACDLabs               12.01  "(1-{[2-(3,5-dichlorophenyl)-6-{[2-(4-methylpiperazin-1-yl)pyrimidin-5-yl]oxy}pyridin-4-yl]methyl}piperidin-4-yl)acetic acid"  
XTA  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "2-[1-[[2-[3,5-bis(chloranyl)phenyl]-6-[2-(4-methylpiperazin-1-yl)pyrimidin-5-yl]oxy-pyridin-4-yl]methyl]piperidin-4-yl]ethanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
XTA  "Create component"  2021-01-12  RCSB  
XTA  "Initial release"   2022-01-12  RCSB  
##
