data_XFA
# 
_chem_comp.id                                    XFA 
_chem_comp.name                                  "2-{[5-chloro-2-(4-chlorophenoxy)phenyl](2-{[2-(methylamino)ethyl]amino}-2-oxoethyl)amino}-N-(1,3-dihydro-2H-isoindol-2-yl)-N-methylacetamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H31 Cl2 N5 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-04-01 
_chem_comp.pdbx_modified_date                    2015-11-20 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        556.483 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     XFA 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4YVF 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
XFA C2  C1  C  0 1 Y N N 26.434 160.254 17.172 2.120  1.477  -1.849 C2  XFA 1  
XFA C4  C2  C  0 1 Y N N 25.209 158.183 17.764 0.463  -0.049 -1.007 C4  XFA 2  
XFA C6  C3  C  0 1 Y N N 27.549 158.544 18.536 0.631  0.365  -3.364 C6  XFA 3  
XFA C9  C4  C  0 1 Y N N 24.185 160.480 15.141 2.902  2.022  0.671  C9  XFA 4  
XFA C14 C5  C  0 1 Y N N 23.727 161.808 14.916 4.194  1.653  1.017  C14 XFA 5  
XFA C13 C6  C  0 1 Y N N 23.712 162.348 13.606 5.161  2.622  1.203  C13 XFA 6  
XFA C12 C7  C  0 1 Y N N 24.153 161.567 12.516 4.842  3.959  1.045  C12 XFA 7  
XFA C11 C8  C  0 1 Y N N 24.611 160.251 12.728 3.554  4.328  0.700  C11 XFA 8  
XFA C1  C9  C  0 1 Y N N 27.582 159.797 17.887 1.679  1.239  -3.138 C1  XFA 9  
XFA C3  C10 C  0 1 Y N N 25.234 159.445 17.102 1.516  0.837  -0.780 C3  XFA 10 
XFA C5  C11 C  0 1 Y N N 26.365 157.741 18.476 0.026  -0.284 -2.302 C5  XFA 11 
XFA CL1 CL1 CL 0 0 N N N 28.939 157.998 19.390 0.083  0.070  -4.984 CL1 XFA 12 
XFA O8  O1  O  0 1 N N N 24.201 159.964 16.393 1.949  1.070  0.487  O8  XFA 13 
XFA C10 C12 C  0 1 Y N N 24.628 159.701 14.046 2.583  3.363  0.518  C10 XFA 14 
XFA CL2 CL2 CL 0 0 N N N 24.133 162.215 10.938 6.061  5.174  1.273  CL2 XFA 15 
XFA N16 N1  N  0 1 N N N 24.058 157.307 17.752 -0.146 -0.703 0.069  N16 XFA 16 
XFA C17 C13 C  0 1 N N N 24.210 155.887 17.346 -1.577 -0.378 0.140  C17 XFA 17 
XFA C18 C14 C  0 1 N N N 24.832 155.458 16.061 -2.145 -0.895 1.437  C18 XFA 18 
XFA N19 N2  N  0 1 N N N 25.998 154.725 16.001 -3.450 -0.710 1.722  N19 XFA 19 
XFA N20 N3  N  0 1 N N N 26.630 154.372 17.242 -4.257 -0.055 0.836  N20 XFA 20 
XFA C21 C15 C  0 1 N N N 26.546 154.333 14.678 -4.002 -1.212 2.983  C21 XFA 21 
XFA O22 O2  O  0 1 N N N 24.272 155.775 14.993 -1.429 -1.476 2.224  O22 XFA 22 
XFA C23 C16 C  0 1 N N N 26.515 153.040 17.817 -5.355 -0.932 0.370  C23 XFA 23 
XFA C24 C17 C  0 1 Y N N 27.730 152.846 18.709 -6.537 -0.018 0.140  C24 XFA 24 
XFA C25 C18 C  0 1 Y N N 28.669 153.850 18.385 -6.300 1.173  0.805  C25 XFA 25 
XFA C26 C19 C  0 1 N N N 28.077 154.704 17.288 -4.956 1.074  1.489  C26 XFA 26 
XFA C27 C20 C  0 1 Y N N 28.019 151.895 19.709 -7.709 -0.190 -0.572 C27 XFA 27 
XFA C28 C21 C  0 1 Y N N 29.260 151.945 20.392 -8.644 0.827  -0.622 C28 XFA 28 
XFA C29 C22 C  0 1 Y N N 30.205 152.950 20.069 -8.407 2.016  0.042  C29 XFA 29 
XFA C30 C23 C  0 1 Y N N 29.908 153.905 19.064 -7.236 2.189  0.755  C30 XFA 30 
XFA C31 C24 C  0 1 N N N 22.719 157.767 18.182 0.060  -2.155 -0.013 C31 XFA 31 
XFA C32 C25 C  0 1 N N N 21.658 157.768 17.077 1.508  -2.473 0.259  C32 XFA 32 
XFA N33 N4  N  0 1 N N N 21.964 157.374 15.806 1.933  -3.752 0.237  N33 XFA 33 
XFA C34 C26 C  0 1 N N N 20.983 157.370 14.710 3.341  -4.060 0.501  C34 XFA 34 
XFA C35 C27 C  0 1 N N N 21.073 158.729 13.984 3.556  -5.573 0.416  C35 XFA 35 
XFA N36 N5  N  0 1 N N N 20.216 158.742 12.797 4.967  -5.882 0.681  N36 XFA 36 
XFA C37 C28 C  0 1 N N N 20.329 160.048 12.133 5.212  -7.329 0.607  C37 XFA 37 
XFA O38 O3  O  0 1 N N N 20.528 158.131 17.342 2.291  -1.578 0.497  O38 XFA 38 
XFA H1  H1  H  0 1 N N N 26.460 161.214 16.678 2.938  2.161  -1.676 H1  XFA 39 
XFA H2  H2  H  0 1 N N N 23.389 162.408 15.748 4.443  0.610  1.142  H2  XFA 40 
XFA H3  H3  H  0 1 N N N 23.363 163.357 13.442 6.167  2.335  1.473  H3  XFA 41 
XFA H4  H4  H  0 1 N N N 24.950 159.657 11.892 3.307  5.372  0.576  H4  XFA 42 
XFA H5  H5  H  0 1 N N N 28.472 160.407 17.931 2.154  1.737  -3.971 H5  XFA 43 
XFA H6  H6  H  0 1 N N N 26.346 156.785 18.978 -0.789 -0.969 -2.481 H6  XFA 44 
XFA H7  H7  H  0 1 N N N 24.978 158.692 14.207 1.578  3.652  0.248  H7  XFA 45 
XFA H8  H8  H  0 1 N N N 23.194 155.465 17.343 -1.707 0.703  0.092  H8  XFA 46 
XFA H9  H9  H  0 1 N N N 24.803 155.410 18.140 -2.098 -0.845 -0.696 H9  XFA 47 
XFA H10 H10 H  0 1 N N N 27.473 153.757 14.820 -3.840 -0.476 3.770  H10 XFA 48 
XFA H11 H11 H  0 1 N N N 25.809 153.715 14.144 -5.071 -1.389 2.866  H11 XFA 49 
XFA H12 H12 H  0 1 N N N 26.762 155.236 14.089 -3.507 -2.145 3.250  H12 XFA 50 
XFA H13 H13 H  0 1 N N N 25.592 152.961 18.410 -5.074 -1.426 -0.560 H13 XFA 51 
XFA H14 H14 H  0 1 N N N 26.504 152.282 17.020 -5.595 -1.673 1.133  H14 XFA 52 
XFA H15 H15 H  0 1 N N N 28.553 154.471 16.324 -5.089 0.871  2.552  H15 XFA 53 
XFA H16 H16 H  0 1 N N N 28.217 155.771 17.517 -4.393 1.997  1.349  H16 XFA 54 
XFA H17 H17 H  0 1 N N N 27.297 151.130 19.954 -7.894 -1.119 -1.091 H17 XFA 55 
XFA H18 H18 H  0 1 N N N 29.485 151.218 21.158 -9.559 0.692  -1.179 H18 XFA 56 
XFA H19 H19 H  0 1 N N N 31.151 152.989 20.588 -9.138 2.811  0.004  H19 XFA 57 
XFA H20 H20 H  0 1 N N N 30.627 154.673 18.818 -7.051 3.118  1.274  H20 XFA 58 
XFA H21 H21 H  0 1 N N N 22.816 158.794 18.565 -0.566 -2.654 0.727  H21 XFA 59 
XFA H22 H22 H  0 1 N N N 22.372 157.105 18.990 -0.208 -2.505 -1.010 H22 XFA 60 
XFA H23 H23 H  0 1 N N N 22.898 157.074 15.611 1.307  -4.468 0.047  H23 XFA 61 
XFA H24 H24 H  0 1 N N N 19.970 157.230 15.116 3.967  -3.562 -0.239 H24 XFA 62 
XFA H25 H25 H  0 1 N N N 21.212 156.555 14.007 3.608  -3.711 1.498  H25 XFA 63 
XFA H26 H26 H  0 1 N N N 22.115 158.906 13.679 2.930  -6.071 1.156  H26 XFA 64 
XFA H27 H27 H  0 1 N N N 20.751 159.526 14.670 3.288  -5.922 -0.581 H27 XFA 65 
XFA H28 H28 H  0 1 N N N 19.266 158.586 13.069 5.258  -5.511 1.573  H28 XFA 66 
XFA H30 H30 H  0 1 N N N 19.687 160.063 11.240 6.264  -7.530 0.807  H30 XFA 67 
XFA H31 H31 H  0 1 N N N 20.011 160.840 12.826 4.597  -7.839 1.349  H31 XFA 68 
XFA H32 H32 H  0 1 N N N 21.374 160.219 11.835 4.955  -7.691 -0.388 H32 XFA 69 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
XFA CL2 C12 SING N N 1  
XFA C37 N36 SING N N 2  
XFA C12 C11 DOUB Y N 3  
XFA C12 C13 SING Y N 4  
XFA C11 C10 SING Y N 5  
XFA N36 C35 SING N N 6  
XFA C13 C14 DOUB Y N 7  
XFA C35 C34 SING N N 8  
XFA C10 C9  DOUB Y N 9  
XFA C21 N19 SING N N 10 
XFA C34 N33 SING N N 11 
XFA C14 C9  SING Y N 12 
XFA O22 C18 DOUB N N 13 
XFA C9  O8  SING N N 14 
XFA N33 C32 SING N N 15 
XFA N19 C18 SING N N 16 
XFA N19 N20 SING N N 17 
XFA C18 C17 SING N N 18 
XFA O8  C3  SING N N 19 
XFA C32 O38 DOUB N N 20 
XFA C32 C31 SING N N 21 
XFA C3  C2  DOUB Y N 22 
XFA C3  C4  SING Y N 23 
XFA C2  C1  SING Y N 24 
XFA N20 C26 SING N N 25 
XFA N20 C23 SING N N 26 
XFA C26 C25 SING N N 27 
XFA C17 N16 SING N N 28 
XFA N16 C4  SING N N 29 
XFA N16 C31 SING N N 30 
XFA C4  C5  DOUB Y N 31 
XFA C23 C24 SING N N 32 
XFA C1  C6  DOUB Y N 33 
XFA C25 C24 DOUB Y N 34 
XFA C25 C30 SING Y N 35 
XFA C5  C6  SING Y N 36 
XFA C6  CL1 SING N N 37 
XFA C24 C27 SING Y N 38 
XFA C30 C29 DOUB Y N 39 
XFA C27 C28 DOUB Y N 40 
XFA C29 C28 SING Y N 41 
XFA C2  H1  SING N N 42 
XFA C14 H2  SING N N 43 
XFA C13 H3  SING N N 44 
XFA C11 H4  SING N N 45 
XFA C1  H5  SING N N 46 
XFA C5  H6  SING N N 47 
XFA C10 H7  SING N N 48 
XFA C17 H8  SING N N 49 
XFA C17 H9  SING N N 50 
XFA C21 H10 SING N N 51 
XFA C21 H11 SING N N 52 
XFA C21 H12 SING N N 53 
XFA C23 H13 SING N N 54 
XFA C23 H14 SING N N 55 
XFA C26 H15 SING N N 56 
XFA C26 H16 SING N N 57 
XFA C27 H17 SING N N 58 
XFA C28 H18 SING N N 59 
XFA C29 H19 SING N N 60 
XFA C30 H20 SING N N 61 
XFA C31 H21 SING N N 62 
XFA C31 H22 SING N N 63 
XFA N33 H23 SING N N 64 
XFA C34 H24 SING N N 65 
XFA C34 H25 SING N N 66 
XFA C35 H26 SING N N 67 
XFA C35 H27 SING N N 68 
XFA N36 H28 SING N N 69 
XFA C37 H30 SING N N 70 
XFA C37 H31 SING N N 71 
XFA C37 H32 SING N N 72 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
XFA SMILES           ACDLabs              12.01 "c1cc(Cl)cc(c1Oc2ccc(cc2)Cl)N(CC(=O)NCCNC)CC(N(N3Cc4c(C3)cccc4)C)=O"                                                                                                                      
XFA InChI            InChI                1.03  "InChI=1S/C28H31Cl2N5O3/c1-31-13-14-32-27(36)18-34(19-28(37)33(2)35-16-20-5-3-4-6-21(20)17-35)25-15-23(30)9-12-26(25)38-24-10-7-22(29)8-11-24/h3-12,15,31H,13-14,16-19H2,1-2H3,(H,32,36)" 
XFA InChIKey         InChI                1.03  AOQCCSFIEWPXMC-UHFFFAOYSA-N                                                                                                                                                               
XFA SMILES_CANONICAL CACTVS               3.385 "CNCCNC(=O)CN(CC(=O)N(C)N1Cc2ccccc2C1)c3cc(Cl)ccc3Oc4ccc(Cl)cc4"                                                                                                                          
XFA SMILES           CACTVS               3.385 "CNCCNC(=O)CN(CC(=O)N(C)N1Cc2ccccc2C1)c3cc(Cl)ccc3Oc4ccc(Cl)cc4"                                                                                                                          
XFA SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CNCCNC(=O)CN(CC(=O)N(C)N1Cc2ccccc2C1)c3cc(ccc3Oc4ccc(cc4)Cl)Cl"                                                                                                                          
XFA SMILES           "OpenEye OEToolkits" 1.9.2 "CNCCNC(=O)CN(CC(=O)N(C)N1Cc2ccccc2C1)c3cc(ccc3Oc4ccc(cc4)Cl)Cl"                                                                                                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
XFA "SYSTEMATIC NAME" ACDLabs              12.01 "2-{[5-chloro-2-(4-chlorophenoxy)phenyl](2-{[2-(methylamino)ethyl]amino}-2-oxoethyl)amino}-N-(1,3-dihydro-2H-isoindol-2-yl)-N-methylacetamide"             
XFA "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "2-[[5-chloranyl-2-(4-chloranylphenoxy)phenyl]-[2-[1,3-dihydroisoindol-2-yl(methyl)amino]-2-oxidanylidene-ethyl]amino]-N-[2-(methylamino)ethyl]ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
XFA "Create component" 2015-04-01 PDBJ 
XFA "Initial release"  2015-11-25 RCSB 
# 
