data_V9A
#

_chem_comp.id                                   V9A
_chem_comp.name                                 "N-{5-[4-(2-amino-4-oxo-3,4-dihydrothieno[2,3-d]pyrimidin-6-yl)butyl]furan-2-carbonyl}-L-glutamic acid"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C20 H22 N4 O7 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-07-20
_chem_comp.pdbx_modified_date                   2021-03-26
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       462.476
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    V9A
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7JG3
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
V9A  O25  O1   O  0  1  N  N  N  -30.458   9.461  37.800    6.907  -3.823   2.385  O25  V9A   1  
V9A  C26  C1   C  0  1  N  N  N  -26.960   6.276  33.877    6.560   0.479  -2.069  C26  V9A   2  
V9A  C30  C2   C  0  1  N  N  N  -28.422  13.888  29.108   -3.103   0.963  -0.879  C30  V9A   3  
V9A  C32  C3   C  0  1  N  N  N  -26.799  13.446  30.925   -0.884   1.379   0.192  C32  V9A   4  
V9A  C31  C4   C  0  1  N  N  N  -27.808  14.443  30.383   -2.273   0.771   0.392  C31  V9A   5  
V9A  C33  C5   C  0  1  N  N  N  -27.026  13.272  32.408   -0.054   1.186   1.463  C33  V9A   6  
V9A  C20  C6   C  0  1  N  N  S  -26.997   7.269  35.035    6.420   0.091  -0.620  C20  V9A   7  
V9A  C16  C7   C  0  1  Y  N  N  -25.991  12.357  33.036    1.314   1.785   1.266  C16  V9A   8  
V9A  C17  C8   C  0  1  N  N  N  -25.382   9.179  34.557    4.789   1.660   0.284  C17  V9A   9  
V9A  C22  C9   C  0  1  N  N  N  -28.607   8.414  36.639    6.643  -1.786   1.015  C22  V9A  10  
V9A  C21  C10  C  0  1  N  N  N  -28.405   7.283  35.627    6.662  -1.413  -0.469  C21  V9A  11  
V9A  C13  C11  C  0  1  Y  N  N  -25.264  10.578  33.974    3.437   1.986   0.749  C13  V9A  12  
V9A  C8   C12  C  0  1  Y  N  N  -25.425  12.543  27.069   -6.729   0.242  -0.099  C8   V9A  13  
V9A  C9   C13  C  0  1  Y  N  N  -26.032  11.287  27.071   -6.551  -1.069  -0.535  C9   V9A  14  
V9A  C4   C14  C  0  1  N  N  N  -24.185  12.678  26.404   -8.024   0.624   0.363  C4   V9A  15  
V9A  C14  C15  C  0  1  Y  N  N  -24.136  11.405  33.866    3.021   3.199   1.217  C14  V9A  16  
V9A  C15  C16  C  0  1  Y  N  N  -24.623  12.604  33.236    1.663   3.060   1.547  C15  V9A  17  
V9A  C2   C17  C  0  1  N  N  N  -24.271  10.439  25.851   -8.772  -1.562  -0.072  C2   V9A  18  
V9A  C23  C18  C  0  1  N  N  N  -30.034   8.440  37.192    6.881  -3.266   1.163  C23  V9A  19  
V9A  C6   C19  C  0  1  Y  N  N  -27.396  13.080  28.323   -4.471   0.364  -0.681  C6   V9A  20  
V9A  C7   C20  C  0  1  Y  N  N  -26.195  13.564  27.776   -5.509   1.022  -0.203  C7   V9A  21  
V9A  N1   N1   N  0  1  N  N  N  -25.440  10.258  26.462   -7.590  -1.928  -0.504  N1   V9A  22  
V9A  N11  N2   N  0  1  N  N  N  -23.648   9.308  25.200   -9.794  -2.478  -0.062  N11  V9A  23  
V9A  N19  N3   N  0  1  N  N  N  -26.708   8.590  34.526    5.069   0.417  -0.156  N19  V9A  24  
V9A  N3   N4   N  0  1  N  N  N  -23.644  11.618  25.817   -9.013  -0.291   0.358  N3   V9A  25  
V9A  O10  O2   O  0  1  N  N  N  -23.547  13.927  26.362   -8.232   1.760   0.755  O10  V9A  26  
V9A  O12  O3   O  0  1  Y  N  N  -26.293  11.182  33.476    2.386   1.140   0.788  O12  V9A  27  
V9A  O18  O4   O  0  1  N  N  N  -24.449   8.610  35.012    5.659   2.511   0.296  O18  V9A  28  
V9A  O24  O5   O  0  1  N  N  N  -30.785   7.440  37.033    7.049  -3.953   0.183  O24  V9A  29  
V9A  O27  O6   O  0  1  N  N  N  -27.129   4.919  34.160    7.721   0.272  -2.710  O27  V9A  30  
V9A  O28  O7   O  0  1  N  N  N  -27.245   6.718  32.580    5.628   0.977  -2.654  O28  V9A  31  
V9A  S5   S1   S  0  1  Y  N  N  -27.503  11.440  27.937   -4.888  -1.297  -1.058  S5   V9A  32  
V9A  H1   H1   H  0  1  N  N  N  -31.356   9.317  38.073    7.063  -4.776   2.430  H1   V9A  33  
V9A  H2   H2   H  0  1  N  N  N  -28.777  14.722  28.485   -3.199   2.028  -1.092  H2   V9A  34  
V9A  H3   H3   H  0  1  N  N  N  -29.270  13.238  29.369   -2.607   0.469  -1.714  H3   V9A  35  
V9A  H4   H4   H  0  1  N  N  N  -26.927  12.479  30.417   -0.388   0.885  -0.644  H4   V9A  36  
V9A  H5   H5   H  0  1  N  N  N  -25.780  13.821  30.750   -0.980   2.444  -0.021  H5   V9A  37  
V9A  H6   H6   H  0  1  N  N  N  -27.303  15.396  30.164   -2.769   1.265   1.228  H6   V9A  38  
V9A  H7   H7   H  0  1  N  N  N  -28.598  14.610  31.130   -2.177  -0.294   0.605  H7   V9A  39  
V9A  H8   H8   H  0  1  N  N  N  -26.971  14.257  32.894   -0.550   1.680   2.299  H8   V9A  40  
V9A  H9   H9   H  0  1  N  N  N  -28.025  12.840  32.566    0.042   0.122   1.676  H9   V9A  41  
V9A  H10  H10  H  0  1  N  N  N  -26.270   6.974  35.806    7.150   0.638  -0.025  H10  V9A  42  
V9A  H11  H11  H  0  1  N  N  N  -27.905   8.273  37.474    7.426  -1.237   1.538  H11  V9A  43  
V9A  H12  H12  H  0  1  N  N  N  -28.400   9.374  36.144    5.673  -1.529   1.441  H12  V9A  44  
V9A  H13  H13  H  0  1  N  N  N  -29.130   7.408  34.809    5.878  -1.961  -0.992  H13  V9A  45  
V9A  H14  H14  H  0  1  N  N  N  -28.584   6.322  36.132    7.631  -1.669  -0.896  H14  V9A  46  
V9A  H15  H15  H  0  1  N  N  N  -23.127  11.190  34.185    3.620   4.092   1.316  H15  V9A  47  
V9A  H16  H16  H  0  1  N  N  N  -24.064  13.491  32.976    1.019   3.828   1.949  H16  V9A  48  
V9A  H17  H17  H  0  1  N  N  N  -25.873  14.591  27.869   -5.456   2.060   0.089  H17  V9A  49  
V9A  H18  H18  H  0  1  N  N  N  -24.095   8.414  25.215   -9.637  -3.383  -0.372  H18  V9A  50  
V9A  H19  H19  H  0  1  N  N  N  -22.770   9.420  24.735  -10.674  -2.219   0.255  H19  V9A  51  
V9A  H20  H20  H  0  1  N  N  N  -27.457   9.124  34.134    4.376  -0.262  -0.165  H20  V9A  52  
V9A  H21  H21  H  0  1  N  N  N  -22.765  11.702  25.348   -9.898  -0.047   0.673  H21  V9A  53  
V9A  H22  H22  H  0  1  N  N  N  -27.432   4.468  33.381    7.763   0.537  -3.639  H22  V9A  54  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
V9A  N11  C2   SING  N  N   1  
V9A  N3   C2   SING  N  N   2  
V9A  N3   C4   SING  N  N   3  
V9A  C2   N1   DOUB  N  N   4  
V9A  O10  C4   DOUB  N  N   5  
V9A  C4   C8   SING  N  N   6  
V9A  N1   C9   SING  N  N   7  
V9A  C8   C9   DOUB  Y  N   8  
V9A  C8   C7   SING  Y  N   9  
V9A  C9   S5   SING  Y  N  10  
V9A  C7   C6   DOUB  Y  N  11  
V9A  S5   C6   SING  Y  N  12  
V9A  C6   C30  SING  N  N  13  
V9A  C30  C31  SING  N  N  14  
V9A  C31  C32  SING  N  N  15  
V9A  C32  C33  SING  N  N  16  
V9A  C33  C16  SING  N  N  17  
V9A  O28  C26  DOUB  N  N  18  
V9A  C16  C15  DOUB  Y  N  19  
V9A  C16  O12  SING  Y  N  20  
V9A  C15  C14  SING  Y  N  21  
V9A  O12  C13  SING  Y  N  22  
V9A  C14  C13  DOUB  Y  N  23  
V9A  C26  O27  SING  N  N  24  
V9A  C26  C20  SING  N  N  25  
V9A  C13  C17  SING  N  N  26  
V9A  N19  C17  SING  N  N  27  
V9A  N19  C20  SING  N  N  28  
V9A  C17  O18  DOUB  N  N  29  
V9A  C20  C21  SING  N  N  30  
V9A  C21  C22  SING  N  N  31  
V9A  C22  C23  SING  N  N  32  
V9A  O24  C23  DOUB  N  N  33  
V9A  C23  O25  SING  N  N  34  
V9A  O25  H1   SING  N  N  35  
V9A  C30  H2   SING  N  N  36  
V9A  C30  H3   SING  N  N  37  
V9A  C32  H4   SING  N  N  38  
V9A  C32  H5   SING  N  N  39  
V9A  C31  H6   SING  N  N  40  
V9A  C31  H7   SING  N  N  41  
V9A  C33  H8   SING  N  N  42  
V9A  C33  H9   SING  N  N  43  
V9A  C20  H10  SING  N  N  44  
V9A  C22  H11  SING  N  N  45  
V9A  C22  H12  SING  N  N  46  
V9A  C21  H13  SING  N  N  47  
V9A  C21  H14  SING  N  N  48  
V9A  C14  H15  SING  N  N  49  
V9A  C15  H16  SING  N  N  50  
V9A  C7   H17  SING  N  N  51  
V9A  N11  H18  SING  N  N  52  
V9A  N11  H19  SING  N  N  53  
V9A  N19  H20  SING  N  N  54  
V9A  N3   H21  SING  N  N  55  
V9A  O27  H22  SING  N  N  56  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
V9A  SMILES            ACDLabs               12.01  "OC(CCC(C(O)=O)NC(=O)c3ccc(CCCCc1cc2c(s1)N=C(N)NC2=O)o3)=O"  
V9A  InChI             InChI                 1.03   "InChI=1S/C20H22N4O7S/c21-20-23-16(27)12-9-11(32-18(12)24-20)4-2-1-3-10-5-7-14(31-10)17(28)22-13(19(29)30)6-8-15(25)26/h5,7,9,13H,1-4,6,8H2,(H,22,28)(H,25,26)(H,29,30)(H3,21,23,24,27)/t13-/m0/s1"  
V9A  InChIKey          InChI                 1.03   LYDGQYDYRQVOBF-ZDUSSCGKSA-N  
V9A  SMILES_CANONICAL  CACTVS                3.385  "NC1=Nc2sc(CCCCc3oc(cc3)C(=O)N[C@@H](CCC(O)=O)C(O)=O)cc2C(=O)N1"  
V9A  SMILES            CACTVS                3.385  "NC1=Nc2sc(CCCCc3oc(cc3)C(=O)N[CH](CCC(O)=O)C(O)=O)cc2C(=O)N1"  
V9A  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc(oc1CCCCc2cc3c(s2)N=C(NC3=O)N)C(=O)N[C@@H](CCC(=O)O)C(=O)O"  
V9A  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc(oc1CCCCc2cc3c(s2)N=C(NC3=O)N)C(=O)NC(CCC(=O)O)C(=O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
V9A  "SYSTEMATIC NAME"  ACDLabs               12.01  "N-{5-[4-(2-amino-4-oxo-3,4-dihydrothieno[2,3-d]pyrimidin-6-yl)butyl]furan-2-carbonyl}-L-glutamic acid"  
V9A  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(2~{S})-2-[[5-[4-(2-azanyl-4-oxidanylidene-3~{H}-thieno[2,3-d]pyrimidin-6-yl)butyl]furan-2-yl]carbonylamino]pentanedioic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
V9A  "Create component"  2020-07-20  RCSB  
V9A  "Initial release"   2021-03-31  RCSB  
##
