data_V2A
#

_chem_comp.id                                   V2A
_chem_comp.name                                 "neoseptin 3"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C29 H34 N2 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "tert-butyl (2S)-2-({4-amino-3-[2-(4-hydroxyphenyl)ethyl]benzene-1-carbonyl}amino)-4-phenylbutanoate"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-06-17
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       474.591
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    V2A
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5IJC
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
V2A  C10  C1   C  0  1  N  N  N  -0.878  -11.716  60.229  -3.766   1.700   0.978  C10  V2A   1  
V2A  C16  C2   C  0  1  Y  N  N  -2.468  -13.309  61.378  -5.904   2.685   1.827  C16  V2A   2  
V2A  C26  C3   C  0  1  Y  N  N  -0.567  -12.891  52.382   2.972   0.218  -1.116  C26  V2A   3  
V2A  C28  C4   C  0  1  N  N  N  -1.497  -15.183  53.184   4.982   0.904   0.164  C28  V2A   4  
V2A  O24  O1   O  0  1  N  N  N   0.317   -9.563  55.637  -0.342  -1.168   0.987  O24  V2A   5  
V2A  C02  C5   C  0  1  Y  N  N  -0.028  -12.123  51.367   2.747   1.063  -2.200  C02  V2A   6  
V2A  C03  C6   C  0  1  Y  N  N   0.559  -10.898  51.649   1.448   1.419  -2.550  C03  V2A   7  
V2A  C04  C7   C  0  1  Y  N  N   0.605  -10.440  52.959   0.382   0.937  -1.827  C04  V2A   8  
V2A  C05  C8   C  0  1  Y  N  N   0.071  -11.212  53.976   0.604   0.089  -0.738  C05  V2A   9  
V2A  C06  C9   C  0  1  N  N  N   0.113  -10.705  55.422  -0.537  -0.430   0.040  C06  V2A  10  
V2A  C08  C10  C  0  1  N  N  S  -0.096  -11.164  57.889  -2.928  -0.600   0.475  C08  V2A  11  
V2A  C09  C11  C  0  1  N  N  N  -0.696  -12.233  58.797  -4.116   0.356   0.337  C09  V2A  12  
V2A  C11  C12  C  0  1  Y  N  N  -1.179  -12.818  61.247  -4.935   2.641   0.843  C11  V2A  13  
V2A  C12  C13  C  0  1  Y  N  N  -0.170  -13.318  62.051  -5.038   3.460  -0.266  C12  V2A  14  
V2A  C13  C14  C  0  1  Y  N  N  -0.449  -14.309  62.978  -6.111   4.323  -0.391  C13  V2A  15  
V2A  C14  C15  C  0  1  Y  N  N  -1.737  -14.802  63.108  -7.080   4.367   0.594  C14  V2A  16  
V2A  C15  C16  C  0  1  Y  N  N  -2.747  -14.298  62.307  -6.977   3.547   1.702  C15  V2A  17  
V2A  C17  C17  C  0  1  N  N  N   1.339  -10.901  58.313  -3.315  -1.960  -0.046  C17  V2A  18  
V2A  C19  C18  C  0  1  N  N  N   2.912   -9.288  59.299  -4.652  -3.933  -0.038  C19  V2A  19  
V2A  C20  C19  C  0  1  N  N  N   2.807   -7.989  60.096  -3.437  -4.852   0.095  C20  V2A  20  
V2A  C21  C20  C  0  1  N  N  N   3.591   -8.980  57.964  -5.020  -3.785  -1.516  C21  V2A  21  
V2A  C22  C21  C  0  1  N  N  N   3.767  -10.256  60.118  -5.834  -4.536   0.723  C22  V2A  22  
V2A  C25  C22  C  0  1  Y  N  N  -0.520  -12.436  53.696   1.910  -0.268  -0.389  C25  V2A  23  
V2A  C27  C23  C  0  1  N  N  N  -1.205  -14.242  52.011   4.380  -0.170  -0.743  C27  V2A  24  
V2A  C29  C24  C  0  1  Y  N  N  -2.064  -16.503  52.642   6.390   0.515   0.537  C29  V2A  25  
V2A  C30  C25  C  0  1  Y  N  N  -3.368  -16.543  52.184   7.449   0.918  -0.255  C30  V2A  26  
V2A  C31  C26  C  0  1  Y  N  N  -3.892  -17.723  51.682   8.740   0.564   0.085  C31  V2A  27  
V2A  C32  C27  C  0  1  Y  N  N  -3.115  -18.865  51.638   8.974  -0.198   1.221  C32  V2A  28  
V2A  C34  C28  C  0  1  Y  N  N  -1.807  -18.829  52.094   7.909  -0.601   2.013  C34  V2A  29  
V2A  C35  C29  C  0  1  Y  N  N  -1.278  -17.647  52.595   6.620  -0.239   1.673  C35  V2A  30  
V2A  N01  N1   N  0  1  N  N  N  -0.082  -12.612  49.997   3.823   1.553  -2.932  N01  V2A  31  
V2A  N07  N2   N  0  1  N  N  N  -0.121  -11.639  56.515  -1.795  -0.085  -0.298  N07  V2A  32  
V2A  O18  O2   O  0  1  N  N  N   1.601   -9.773  59.124  -4.336  -2.628   0.515  O18  V2A  33  
V2A  O23  O3   O  0  1  N  N  N   2.171  -11.667  57.960  -2.707  -2.449  -0.968  O23  V2A  34  
V2A  O33  O4   O  0  1  N  N  N  -3.659  -20.054  51.130  10.243  -0.548   1.556  O33  V2A  35  
V2A  H1   H1   H  0  1  N  N  N   0.047  -11.205  60.534  -3.540   1.551   2.034  H1   V2A  36  
V2A  H2   H2   H  0  1  N  N  N  -1.712  -10.999  60.236  -2.896   2.126   0.477  H2   V2A  37  
V2A  H3   H3   H  0  1  N  N  N  -3.258  -12.919  60.753  -5.826   2.042   2.691  H3   V2A  38  
V2A  H4   H4   H  0  1  N  N  N  -0.567  -15.381  53.737   4.996   1.858  -0.361  H4   V2A  39  
V2A  H5   H5   H  0  1  N  N  N  -2.231  -14.716  53.857   4.379   0.995   1.068  H5   V2A  40  
V2A  H6   H6   H  0  1  N  N  N   0.979  -10.302  50.852   1.277   2.075  -3.391  H6   V2A  41  
V2A  H7   H7   H  0  1  N  N  N   1.056   -9.485  53.184  -0.626   1.215  -2.099  H7   V2A  42  
V2A  H8   H8   H  0  1  N  N  N  -0.680  -10.237  57.983  -2.646  -0.679   1.525  H8   V2A  43  
V2A  H9   H9   H  0  1  N  N  N  -1.676  -12.532  58.398  -4.985  -0.071   0.838  H9   V2A  44  
V2A  H10  H10  H  0  1  N  N  N  -0.026  -13.105  58.814  -4.342   0.505  -0.719  H10  V2A  45  
V2A  H11  H11  H  0  1  N  N  N   0.836  -12.936  61.956  -4.281   3.425  -1.035  H11  V2A  46  
V2A  H12  H12  H  0  1  N  N  N   0.341  -14.699  63.602  -6.191   4.963  -1.257  H12  V2A  47  
V2A  H13  H13  H  0  1  N  N  N  -1.952  -15.575  63.830  -7.918   5.041   0.496  H13  V2A  48  
V2A  H14  H14  H  0  1  N  N  N  -3.754  -14.676  62.406  -7.737   3.579   2.470  H14  V2A  49  
V2A  H15  H15  H  0  1  N  N  N   2.320   -8.189  61.062  -3.674  -5.831  -0.320  H15  V2A  50  
V2A  H16  H16  H  0  1  N  N  N   3.815   -7.583  60.270  -2.595  -4.422  -0.447  H16  V2A  51  
V2A  H17  H17  H  0  1  N  N  N   2.211   -7.259  59.530  -3.175  -4.957   1.148  H17  V2A  52  
V2A  H18  H18  H  0  1  N  N  N   4.609   -8.605  58.148  -5.258  -4.764  -1.931  H18  V2A  53  
V2A  H19  H19  H  0  1  N  N  N   3.642   -9.897  57.358  -5.886  -3.130  -1.611  H19  V2A  54  
V2A  H20  H20  H  0  1  N  N  N   3.011   -8.216  57.425  -4.178  -3.355  -2.059  H20  V2A  55  
V2A  H21  H21  H  0  1  N  N  N   3.267  -10.468  61.075  -5.572  -4.642   1.776  H21  V2A  56  
V2A  H22  H22  H  0  1  N  N  N   3.899  -11.193  59.557  -6.700  -3.881   0.628  H22  V2A  57  
V2A  H23  H23  H  0  1  N  N  N   4.751   -9.803  60.311  -6.072  -5.516   0.308  H23  V2A  58  
V2A  H24  H24  H  0  1  N  N  N  -0.941  -13.031  54.493   2.085  -0.923   0.452  H24  V2A  59  
V2A  H25  H25  H  0  1  N  N  N  -2.156  -14.037  51.497   4.366  -1.125  -0.218  H25  V2A  60  
V2A  H26  H26  H  0  1  N  N  N  -0.521  -14.761  51.323   4.983  -0.262  -1.647  H26  V2A  61  
V2A  H27  H27  H  0  1  N  N  N  -3.979  -15.653  52.218   7.267   1.511  -1.139  H27  V2A  62  
V2A  H28  H28  H  0  1  N  N  N  -4.911  -17.751  51.324   9.568   0.878  -0.534  H28  V2A  63  
V2A  H29  H29  H  0  1  N  N  N  -1.199  -19.721  52.060   8.088  -1.193   2.898  H29  V2A  64  
V2A  H30  H30  H  0  1  N  N  N  -0.258  -17.617  52.947   5.791  -0.552   2.290  H30  V2A  65  
V2A  H31  H31  H  0  1  N  N  N  -0.536  -13.503  49.978   3.668   2.142  -3.687  H31  V2A  66  
V2A  H32  H32  H  0  1  N  N  N  -0.595  -11.965  49.432   4.729   1.305  -2.689  H32  V2A  67  
V2A  H33  H33  H  0  1  N  N  N  -0.298  -12.604  56.321  -1.951   0.504  -1.053  H33  V2A  68  
V2A  H34  H34  H  0  1  N  N  N  -3.006  -20.743  51.167  10.688   0.089   2.132  H34  V2A  69  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
V2A  N01  C02  SING  N  N   1  
V2A  O33  C32  SING  N  N   2  
V2A  C02  C03  DOUB  Y  N   3  
V2A  C02  C26  SING  Y  N   4  
V2A  C32  C31  DOUB  Y  N   5  
V2A  C32  C34  SING  Y  N   6  
V2A  C03  C04  SING  Y  N   7  
V2A  C31  C30  SING  Y  N   8  
V2A  C27  C26  SING  N  N   9  
V2A  C27  C28  SING  N  N  10  
V2A  C34  C35  DOUB  Y  N  11  
V2A  C30  C29  DOUB  Y  N  12  
V2A  C26  C25  DOUB  Y  N  13  
V2A  C35  C29  SING  Y  N  14  
V2A  C29  C28  SING  N  N  15  
V2A  C04  C05  DOUB  Y  N  16  
V2A  C25  C05  SING  Y  N  17  
V2A  C05  C06  SING  N  N  18  
V2A  C06  O24  DOUB  N  N  19  
V2A  C06  N07  SING  N  N  20  
V2A  N07  C08  SING  N  N  21  
V2A  C08  C17  SING  N  N  22  
V2A  C08  C09  SING  N  N  23  
V2A  O23  C17  DOUB  N  N  24  
V2A  C21  C19  SING  N  N  25  
V2A  C17  O18  SING  N  N  26  
V2A  C09  C10  SING  N  N  27  
V2A  O18  C19  SING  N  N  28  
V2A  C19  C20  SING  N  N  29  
V2A  C19  C22  SING  N  N  30  
V2A  C10  C11  SING  N  N  31  
V2A  C11  C16  DOUB  Y  N  32  
V2A  C11  C12  SING  Y  N  33  
V2A  C16  C15  SING  Y  N  34  
V2A  C12  C13  DOUB  Y  N  35  
V2A  C15  C14  DOUB  Y  N  36  
V2A  C13  C14  SING  Y  N  37  
V2A  C10  H1   SING  N  N  38  
V2A  C10  H2   SING  N  N  39  
V2A  C16  H3   SING  N  N  40  
V2A  C28  H4   SING  N  N  41  
V2A  C28  H5   SING  N  N  42  
V2A  C03  H6   SING  N  N  43  
V2A  C04  H7   SING  N  N  44  
V2A  C08  H8   SING  N  N  45  
V2A  C09  H9   SING  N  N  46  
V2A  C09  H10  SING  N  N  47  
V2A  C12  H11  SING  N  N  48  
V2A  C13  H12  SING  N  N  49  
V2A  C14  H13  SING  N  N  50  
V2A  C15  H14  SING  N  N  51  
V2A  C20  H15  SING  N  N  52  
V2A  C20  H16  SING  N  N  53  
V2A  C20  H17  SING  N  N  54  
V2A  C21  H18  SING  N  N  55  
V2A  C21  H19  SING  N  N  56  
V2A  C21  H20  SING  N  N  57  
V2A  C22  H21  SING  N  N  58  
V2A  C22  H22  SING  N  N  59  
V2A  C22  H23  SING  N  N  60  
V2A  C25  H24  SING  N  N  61  
V2A  C27  H25  SING  N  N  62  
V2A  C27  H26  SING  N  N  63  
V2A  C30  H27  SING  N  N  64  
V2A  C31  H28  SING  N  N  65  
V2A  C34  H29  SING  N  N  66  
V2A  C35  H30  SING  N  N  67  
V2A  N01  H31  SING  N  N  68  
V2A  N01  H32  SING  N  N  69  
V2A  N07  H33  SING  N  N  70  
V2A  O33  H34  SING  N  N  71  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
V2A  SMILES            ACDLabs               12.01  "C(c1ccccc1)CC(C(OC(C)(C)C)=O)NC(=O)c2ccc(c(c2)CCc3ccc(cc3)O)N"  
V2A  InChI             InChI                 1.03   "InChI=1S/C29H34N2O4/c1-29(2,3)35-28(34)26(18-12-20-7-5-4-6-8-20)31-27(33)23-14-17-25(30)22(19-23)13-9-21-10-15-24(32)16-11-21/h4-8,10-11,14-17,19,26,32H,9,12-13,18,30H2,1-3H3,(H,31,33)/t26-/m0/s1"  
V2A  InChIKey          InChI                 1.03   OACODUCFPHHCIH-SANMLTNESA-N  
V2A  SMILES_CANONICAL  CACTVS                3.385  "CC(C)(C)OC(=O)[C@H](CCc1ccccc1)NC(=O)c2ccc(N)c(CCc3ccc(O)cc3)c2"  
V2A  SMILES            CACTVS                3.385  "CC(C)(C)OC(=O)[CH](CCc1ccccc1)NC(=O)c2ccc(N)c(CCc3ccc(O)cc3)c2"  
V2A  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC(C)(C)OC(=O)[C@H](CCc1ccccc1)NC(=O)c2ccc(c(c2)CCc3ccc(cc3)O)N"  
V2A  SMILES            "OpenEye OEToolkits"  2.0.7  "CC(C)(C)OC(=O)C(CCc1ccccc1)NC(=O)c2ccc(c(c2)CCc3ccc(cc3)O)N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
V2A  "SYSTEMATIC NAME"  ACDLabs               12.01  "tert-butyl (2S)-2-({4-amino-3-[2-(4-hydroxyphenyl)ethyl]benzene-1-carbonyl}amino)-4-phenylbutanoate"  
V2A  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "~{tert}-butyl (2~{S})-2-[[4-azanyl-3-[2-(4-hydroxyphenyl)ethyl]phenyl]carbonylamino]-4-phenyl-butanoate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
V2A  "Create component"  2020-06-17  RCSB  
V2A  "Initial release"   2020-07-01  RCSB  
V2A  "Modify synonyms"   2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     V2A
_pdbx_chem_comp_synonyms.name        "tert-butyl (2S)-2-({4-amino-3-[2-(4-hydroxyphenyl)ethyl]benzene-1-carbonyl}amino)-4-phenylbutanoate"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
