data_U5A
#

_chem_comp.id                                   U5A
_chem_comp.name                                 "[(2Z,3aS,4R,6Z,10aR)-2,6-diiminooctahydro-1H,8H-pyrrolo[1,2-c]purin-4-yl]methyl carbamate"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C10 H17 N7 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-04-23
_chem_comp.pdbx_modified_date                   2020-06-12
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       267.288
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    U5A
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6WNB
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
U5A  N    N1   N  0  1  N  N  N  -26.953  -29.761  70.728  -5.143  -0.474   0.287  N    U5A   1  
U5A  C    C1   C  0  1  N  N  N  -28.219  -29.747  70.290  -3.978  -0.204  -0.335  C    U5A   2  
U5A  O    O1   O  0  1  N  N  N  -29.011  -30.668  70.368  -3.956   0.559  -1.280  O    U5A   3  
U5A  C5   C2   C  0  1  N  N  N  -30.018  -24.651  65.571   1.706   2.710  -1.039  C5   U5A   4  
U5A  N4   N2   N  0  1  N  N  N  -30.390  -27.415  64.548   2.918  -0.020  -0.381  N4   U5A   5  
U5A  N3   N3   N  0  1  N  N  N  -28.907  -26.563  66.357   0.996   1.078   0.599  N3   U5A   6  
U5A  C2   C3   C  0  1  N  N  R  -29.647  -28.945  67.641  -0.439  -1.187  -0.000  C2   U5A   7  
U5A  O1   O2   O  0  1  N  N  N  -28.528  -28.556  69.723  -2.838  -0.780   0.092  O1   U5A   8  
U5A  C6   C4   C  0  1  N  N  N  -30.985  -25.644  66.200   1.380   1.359  -1.724  C6   U5A   9  
U5A  C7   C5   C  0  1  N  N  R  -30.246  -27.017  65.960   1.509   0.354  -0.562  C7   U5A  10  
U5A  C8   C6   C  0  1  N  N  N  -30.863  -28.671  64.386   2.955  -1.374  -0.145  C8   U5A  11  
U5A  C9   C7   C  0  1  N  N  S  -30.704  -28.331  66.709   0.794  -0.953  -0.853  C9   U5A  12  
U5A  C1   C8   C  0  1  N  N  N  -29.813  -28.454  69.067  -1.621  -0.443  -0.624  C1   U5A  13  
U5A  C3   C9   C  0  1  N  N  N  -27.925  -27.488  66.527   0.192   0.561   1.586  C3   U5A  14  
U5A  C4   C10  C  0  1  N  N  N  -28.631  -25.193  65.896   1.459   2.468   0.465  C4   U5A  15  
U5A  N1   N4   N  0  1  N  N  N  -28.303  -28.631  67.135  -0.264  -0.728   1.375  N1   U5A  16  
U5A  N2   N5   N  0  1  N  N  N  -26.737  -27.141  66.075  -0.121   1.241   2.652  N2   U5A  17  
U5A  N5   N6   N  0  1  N  N  N  -31.147  -29.327  63.309   3.964  -1.994   0.399  N5   U5A  18  
U5A  N6   N7   N  0  1  N  N  N  -31.048  -29.218  65.610   1.799  -1.991  -0.551  N6   U5A  19  
U5A  H1   H1   H  0  1  N  N  N  -26.584  -30.581  71.165  -5.964  -0.060  -0.021  H1   U5A  20  
U5A  H2   H2   H  0  1  N  N  N  -26.377  -28.951  70.618  -5.161  -1.087   1.039  H2   U5A  21  
U5A  H3   H3   H  0  1  N  N  N  -30.154  -23.650  66.006   2.747   2.981  -1.212  H3   U5A  22  
U5A  H4   H4   H  0  1  N  N  N  -30.168  -24.601  64.482   1.043   3.492  -1.410  H4   U5A  23  
U5A  H5   H5   H  0  1  N  N  N  -29.782  -30.037  67.635  -0.662  -2.254   0.012  H5   U5A  24  
U5A  H6   H6   H  0  1  N  N  N  -31.120  -25.445  67.273   0.366   1.361  -2.122  H6   U5A  25  
U5A  H7   H7   H  0  1  N  N  N  -31.963  -25.623  65.697   2.102   1.140  -2.510  H7   U5A  26  
U5A  H8   H8   H  0  1  N  N  N  -31.603  -28.097  67.298   0.525  -0.999  -1.908  H8   U5A  27  
U5A  H9   H9   H  0  1  N  N  N  -30.150  -27.407  69.065  -1.448   0.632  -0.561  H9   U5A  28  
U5A  H10  H10  H  0  1  N  N  N  -30.552  -29.076  69.593  -1.722  -0.733  -1.670  H10  U5A  29  
U5A  H11  H11  H  0  1  N  N  N  -27.990  -25.199  65.002   2.385   2.608   1.023  H11  U5A  30  
U5A  H12  H12  H  0  1  N  N  N  -28.151  -24.599  66.688   0.694   3.152   0.833  H12  U5A  31  
U5A  H13  H13  H  0  1  N  N  N  -26.055  -27.856  66.227  -0.692   0.845   3.330  H13  U5A  32  
U5A  H15  H15  H  0  1  N  N  N  -31.501  -30.241  63.509   3.926  -2.953   0.538  H15  U5A  33  
U5A  H17  H17  H  0  1  N  N  N  -31.390  -30.148  65.746   1.665  -2.949  -0.627  H17  U5A  34  
U5A  H18  H18  H  0  1  N  N  N  -30.160  -26.813  63.783   3.681   0.578  -0.420  H18  U5A  35  
U5A  H19  H19  H  0  1  N  N  N  -27.601  -29.333  67.253  -0.464  -1.312   2.123  H19  U5A  36  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
U5A  N5  C8   DOUB  N  N   1  
U5A  C8  N4   SING  N  N   2  
U5A  C8  N6   SING  N  N   3  
U5A  N4  C7   SING  N  N   4  
U5A  C5  C4   SING  N  N   5  
U5A  C5  C6   SING  N  N   6  
U5A  N6  C9   SING  N  N   7  
U5A  C4  N3   SING  N  N   8  
U5A  C7  C6   SING  N  N   9  
U5A  C7  N3   SING  N  N  10  
U5A  C7  C9   SING  N  N  11  
U5A  N2  C3   DOUB  N  N  12  
U5A  N3  C3   SING  N  N  13  
U5A  C3  N1   SING  N  N  14  
U5A  C9  C2   SING  N  N  15  
U5A  N1  C2   SING  N  N  16  
U5A  C2  C1   SING  N  N  17  
U5A  C1  O1   SING  N  N  18  
U5A  O1  C    SING  N  N  19  
U5A  C   O    DOUB  N  N  20  
U5A  C   N    SING  N  N  21  
U5A  N   H1   SING  N  N  22  
U5A  N   H2   SING  N  N  23  
U5A  C5  H3   SING  N  N  24  
U5A  C5  H4   SING  N  N  25  
U5A  C2  H5   SING  N  N  26  
U5A  C6  H6   SING  N  N  27  
U5A  C6  H7   SING  N  N  28  
U5A  C9  H8   SING  N  N  29  
U5A  C1  H9   SING  N  N  30  
U5A  C1  H10  SING  N  N  31  
U5A  C4  H11  SING  N  N  32  
U5A  C4  H12  SING  N  N  33  
U5A  N2  H13  SING  N  N  34  
U5A  N5  H15  SING  N  N  35  
U5A  N6  H17  SING  N  N  36  
U5A  N4  H18  SING  N  N  37  
U5A  N1  H19  SING  N  N  38  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
U5A  SMILES            ACDLabs               12.01  "NC(=O)OCC2C1C3(N/C(N1)=N)N(/C(N2)=N)CCC3"  
U5A  InChI             InChI                 1.03   "InChI=1S/C10H17N7O2/c11-7-15-6-5(4-19-9(13)18)14-8(12)17-3-1-2-10(6,17)16-7/h5-6H,1-4H2,(H2,12,14)(H2,13,18)(H3,11,15,16)/t5-,6-,10+/m0/s1"  
U5A  InChIKey          InChI                 1.03   WSPXQONARWJOKG-JFWOZONXSA-N  
U5A  SMILES_CANONICAL  CACTVS                3.385  "NC(=O)OC[C@@H]1NC(=N)N2CCC[C@@]23NC(=N)N[C@@H]13"  
U5A  SMILES            CACTVS                3.385  "NC(=O)OC[CH]1NC(=N)N2CCC[C]23NC(=N)N[CH]13"  
U5A  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "[H]/N=C\1/N[C@H]2[C@@H](N/C(=N/[H])/N3[C@]2(N1)CCC3)COC(=O)N"  
U5A  SMILES            "OpenEye OEToolkits"  2.0.7  "C1CC23C(C(NC(=N)N2C1)COC(=O)N)NC(=N)N3"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
U5A  "SYSTEMATIC NAME"  ACDLabs               12.01  "[(2Z,3aS,4R,6Z,10aR)-2,6-diiminooctahydro-1H,8H-pyrrolo[1,2-c]purin-4-yl]methyl carbamate"  
U5A  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "[(3~{a}~{S},4~{R},10~{a}~{R})-2,6-bis(azanylidene)-1,3,3~{a},4,5,8,9,10-octahydropyrrolo[1,2-c]purin-4-yl]methyl carbamate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
U5A  "Create component"  2020-04-23  RCSB  
U5A  "Initial release"   2020-06-17  RCSB  
##
