data_Q2A
# 
_chem_comp.id                                    Q2A 
_chem_comp.name                                  "3-{[(3S)-3-({6-amino-8-[(6-iodo-2H-1,3-benzodioxol-5-yl)sulfanyl]-9H-purin-9-yl}methyl)piperidin-1-yl]methyl}benzene-1-sulfonyl fluoride" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H24 F I N6 O4 S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2019-09-10 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        682.529 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Q2A 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6U9A 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Q2A C12  C1  C 0 1 N N N N N N 3.150  9.689  26.038 0.052  2.093  -1.077 C12  Q2A 1  
Q2A C13  C2  C 0 1 N N S N N N 3.206  8.167  25.867 -1.258 1.816  -0.336 C13  Q2A 2  
Q2A C14  C3  C 0 1 N N N N N N 3.333  7.763  24.407 -1.469 2.880  0.745  C14  Q2A 3  
Q2A C15  C4  C 0 1 N N N N N N 3.586  6.249  24.308 -2.809 2.632  1.441  C15  Q2A 4  
Q2A C17  C5  C 0 1 N N N N N N 4.433  7.631  26.644 -2.425 1.863  -1.325 C17  Q2A 5  
Q2A C18  C6  C 0 1 N N N N N N 5.811  5.730  27.320 -4.811 1.520  -1.548 C18  Q2A 6  
Q2A C19  C7  C 0 1 Y N N N N N 5.618  5.923  28.816 -6.031 1.023  -0.817 C19  Q2A 7  
Q2A C20  C8  C 0 1 Y N N N N N 6.270  6.974  29.449 -6.899 1.925  -0.230 C20  Q2A 8  
Q2A N1   N1  N 0 1 Y N N N N N 0.253  9.887  27.072 1.493  4.203  0.828  N1   Q2A 9  
Q2A C5   C9  C 0 1 Y N N N N N 4.174  12.388 23.836 2.883  -1.726 -0.038 C5   Q2A 10 
Q2A C6   C10 C 0 1 Y N N N N N 3.568  13.573 24.366 2.658  -2.636 0.987  C6   Q2A 11 
Q2A C7   C11 C 0 1 Y N N N N N 4.348  14.581 24.900 3.709  -3.384 1.490  C7   Q2A 12 
Q2A C9   C12 C 0 1 Y N N N N N 6.399  13.318 24.407 5.210  -2.314 -0.056 C9   Q2A 13 
Q2A O2   O1  O 0 1 N N N N N N 2.707  3.587  31.086 -8.521 -2.849 -1.089 O2   Q2A 14 
Q2A S1   S1  S 0 1 N N N N N N 3.611  4.420  31.830 -7.725 -2.518 0.041  S1   Q2A 15 
Q2A O1   O2  O 0 1 N N N N N N 6.269  15.587 25.479 5.840  -4.066 1.626  O1   Q2A 16 
Q2A C21  C13 C 0 1 Y N N N N N 6.088  7.191  30.808 -8.019 1.469  0.441  C21  Q2A 17 
Q2A O3   O3  O 0 1 N N N N N N 3.057  5.080  32.983 -6.479 -3.140 0.323  O3   Q2A 18 
Q2A C11  C14 C 0 1 N N N N N N 5.200  16.512 25.747 5.147  -4.445 2.830  C11  Q2A 19 
Q2A C10  C15 C 0 1 Y N N N N N 5.672  12.257 23.845 4.161  -1.567 -0.558 C10  Q2A 20 
Q2A C8   C16 C 0 1 Y N N N N N 5.789  14.466 24.888 4.990  -3.223 0.967  C8   Q2A 21 
Q2A C1   C17 C 0 1 Y N N N N N 0.757  10.352 25.916 1.735  2.911  0.633  C1   Q2A 22 
Q2A C23  C18 C 0 1 Y N N N N N 4.578  5.337  30.934 -7.405 -0.789 -0.066 C23  Q2A 23 
Q2A C3   C19 C 0 1 Y N N N N N -1.507 11.202 25.307 3.527  3.084  2.235  C3   Q2A 24 
Q2A C24  C20 C 0 1 Y N N N N N 4.758  5.116  29.562 -6.285 -0.333 -0.737 C24  Q2A 25 
Q2A C4   C21 C 0 1 Y N N N N N 1.852  10.940 24.215 1.871  0.774  0.083  C4   Q2A 26 
Q2A C16  C22 C 0 1 N N N N N N 4.795  5.811  25.132 -3.931 2.655  0.400  C16  Q2A 27 
Q2A N    N2  N 0 1 Y N N N N N -1.879 10.715 26.499 3.212  4.369  2.364  N    Q2A 28 
Q2A C    C23 C 0 1 Y N N N N N -1.040 10.092 27.332 2.220  4.902  1.674  C    Q2A 29 
Q2A O    O4  O 0 1 N N N N N N 3.989  15.769 25.465 3.756  -4.327 2.476  O    Q2A 30 
Q2A C2   C24 C 0 1 Y N N N N N -0.083 11.057 24.943 2.780  2.298  1.343  C2   Q2A 31 
Q2A C22  C25 C 0 1 Y N N N N N 5.252  6.382  31.548 -8.270 0.113  0.525  C22  Q2A 32 
Q2A F    F1  F 0 1 N N N N N N 4.555  3.386  32.498 -8.653 -2.751 1.336  F    Q2A 33 
Q2A I    I1  I 0 1 N N N N N N 6.743  10.549 23.082 4.499  -0.196 -2.105 I    Q2A 34 
Q2A N2   N3  N 0 1 Y N N N N N 1.981  10.319 25.404 1.178  1.930  -0.154 N2   Q2A 35 
Q2A N3   N4  N 0 1 Y N N N N N 0.655  11.419 23.888 2.813  0.995  0.966  N3   Q2A 36 
Q2A N4   N5  N 0 1 N N N N N N -2.318 11.838 24.470 4.569  2.534  2.963  N4   Q2A 37 
Q2A N5   N6  N 0 1 N N N N N N 4.619  6.169  26.547 -3.684 1.619  -0.610 N5   Q2A 38 
Q2A S    S2  S 0 1 N N N N N N 3.220  11.144 23.142 1.545  -0.779 -0.684 S    Q2A 39 
Q2A H121 H1  H 0 0 N N N N N N 4.059  10.121 25.594 0.155  1.391  -1.904 H121 Q2A 40 
Q2A H122 H2  H 0 0 N N N N N N 3.124  9.916  27.114 0.042  3.112  -1.463 H122 Q2A 41 
Q2A H13  H3  H 0 1 N N N N N N 2.293  7.722  26.290 -1.213 0.831  0.127  H13  Q2A 42 
Q2A H142 H4  H 0 0 N N N N N N 4.174  8.305  23.950 -0.662 2.821  1.476  H142 Q2A 43 
Q2A H141 H5  H 0 0 N N N N N N 2.403  8.014  23.876 -1.473 3.869  0.287  H141 Q2A 44 
Q2A H151 H6  H 0 0 N N N N N N 2.696  5.716  24.674 -2.789 1.659  1.933  H151 Q2A 45 
Q2A H152 H7  H 0 0 N N N N N N 3.762  5.987  23.254 -2.985 3.411  2.183  H152 Q2A 46 
Q2A H172 H8  H 0 0 N N N N N N 5.334  8.121  26.246 -2.460 2.845  -1.798 H172 Q2A 47 
Q2A H171 H9  H 0 0 N N N N N N 4.311  7.894  27.705 -2.285 1.097  -2.088 H171 Q2A 48 
Q2A H182 H10 H 0 0 N N N N N N 5.992  4.664  27.119 -4.558 0.823  -2.348 H182 Q2A 49 
Q2A H181 H11 H 0 0 N N N N N N 6.682  6.318  26.995 -5.017 2.502  -1.974 H181 Q2A 50 
Q2A H20  H12 H 0 1 N N N N N N 6.920  7.624  28.882 -6.703 2.985  -0.296 H20  Q2A 51 
Q2A H6   H13 H 0 1 N N N N N N 2.493  13.679 24.348 1.665  -2.760 1.392  H6   Q2A 52 
Q2A H9   H14 H 0 1 N N N N N N 7.474  13.237 24.467 6.204  -2.189 -0.461 H9   Q2A 53 
Q2A H21  H15 H 0 1 N N N N N N 6.608  8.004  31.292 -8.697 2.173  0.900  H21  Q2A 54 
Q2A H112 H16 H 0 0 N N N N N N 5.276  17.392 25.092 5.387  -5.473 3.102  H112 Q2A 55 
Q2A H111 H17 H 0 0 N N N N N N 5.221  16.834 26.798 5.396  -3.766 3.645  H111 Q2A 56 
Q2A H24  H18 H 0 1 N N N N N N 4.225  4.312  29.076 -5.609 -1.037 -1.199 H24  Q2A 57 
Q2A H161 H19 H 0 0 N N N N N N 4.913  4.721  25.048 -4.886 2.464  0.891  H161 Q2A 58 
Q2A H162 H20 H 0 0 N N N N N N 5.696  6.308  24.743 -3.959 3.633  -0.081 H162 Q2A 59 
Q2A H    H21 H 0 1 N N N N N N -1.432 9.733  28.272 1.997  5.950  1.809  H    Q2A 60 
Q2A H22  H22 H 0 1 N N N N N N 5.122  6.562  32.605 -9.145 -0.243 1.050  H22  Q2A 61 
Q2A HN41 H23 H 0 0 N N N N N N -3.234 11.892 24.869 5.079  3.087  3.575  HN41 Q2A 62 
Q2A HN42 H24 H 0 0 N N N N N N -1.971 12.761 24.307 4.790  1.595  2.860  HN42 Q2A 63 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Q2A I   C10  SING N N 1  
Q2A S   C5   SING N N 2  
Q2A S   C4   SING N N 3  
Q2A C5  C10  DOUB Y N 4  
Q2A C5  C6   SING Y N 5  
Q2A C10 C9   SING Y N 6  
Q2A N3  C4   DOUB Y N 7  
Q2A N3  C2   SING Y N 8  
Q2A C4  N2   SING Y N 9  
Q2A C15 C14  SING N N 10 
Q2A C15 C16  SING N N 11 
Q2A C6  C7   DOUB Y N 12 
Q2A C14 C13  SING N N 13 
Q2A C9  C8   DOUB Y N 14 
Q2A N4  C3   SING N N 15 
Q2A C8  C7   SING Y N 16 
Q2A C8  O1   SING N N 17 
Q2A C7  O    SING N N 18 
Q2A C2  C3   DOUB Y N 19 
Q2A C2  C1   SING Y N 20 
Q2A C16 N5   SING N N 21 
Q2A C3  N    SING Y N 22 
Q2A N2  C1   SING Y N 23 
Q2A N2  C12  SING N N 24 
Q2A O   C11  SING N N 25 
Q2A O1  C11  SING N N 26 
Q2A C13 C12  SING N N 27 
Q2A C13 C17  SING N N 28 
Q2A C1  N1   DOUB Y N 29 
Q2A N   C    DOUB Y N 30 
Q2A N5  C17  SING N N 31 
Q2A N5  C18  SING N N 32 
Q2A N1  C    SING Y N 33 
Q2A C18 C19  SING N N 34 
Q2A C19 C20  DOUB Y N 35 
Q2A C19 C24  SING Y N 36 
Q2A C20 C21  SING Y N 37 
Q2A C24 C23  DOUB Y N 38 
Q2A C21 C22  DOUB Y N 39 
Q2A C23 C22  SING Y N 40 
Q2A C23 S1   SING N N 41 
Q2A O2  S1   DOUB N N 42 
Q2A S1  F    SING N N 43 
Q2A S1  O3   DOUB N N 44 
Q2A C12 H121 SING N N 45 
Q2A C12 H122 SING N N 46 
Q2A C13 H13  SING N N 47 
Q2A C14 H142 SING N N 48 
Q2A C14 H141 SING N N 49 
Q2A C15 H151 SING N N 50 
Q2A C15 H152 SING N N 51 
Q2A C17 H172 SING N N 52 
Q2A C17 H171 SING N N 53 
Q2A C18 H182 SING N N 54 
Q2A C18 H181 SING N N 55 
Q2A C20 H20  SING N N 56 
Q2A C6  H6   SING N N 57 
Q2A C9  H9   SING N N 58 
Q2A C21 H21  SING N N 59 
Q2A C11 H112 SING N N 60 
Q2A C11 H111 SING N N 61 
Q2A C24 H24  SING N N 62 
Q2A C16 H161 SING N N 63 
Q2A C16 H162 SING N N 64 
Q2A C   H    SING N N 65 
Q2A C22 H22  SING N N 66 
Q2A N4  HN41 SING N N 67 
Q2A N4  HN42 SING N N 68 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Q2A SMILES           ACDLabs              12.01 "C(C2CN(Cc1cccc(S(=O)(F)=O)c1)CCC2)n4c3ncnc(c3nc4Sc5c(cc6c(c5)OCO6)I)N"                                                                                                                                              
Q2A InChI            InChI                1.03  "InChI=1S/C25H24FIN6O4S2/c26-39(34,35)17-5-1-3-15(7-17)10-32-6-2-4-16(11-32)12-33-24-22(23(28)29-13-30-24)31-25(33)38-21-9-20-19(8-18(21)27)36-14-37-20/h1,3,5,7-9,13,16H,2,4,6,10-12,14H2,(H2,28,29,30)/t16-/m0/s1" 
Q2A InChIKey         InChI                1.03  GWFJRSCGJINASO-INIZCTEOSA-N                                                                                                                                                                                          
Q2A SMILES_CANONICAL CACTVS               3.385 "Nc1ncnc2n(C[C@H]3CCCN(C3)Cc4cccc(c4)[S](F)(=O)=O)c(Sc5cc6OCOc6cc5I)nc12"                                                                                                                                            
Q2A SMILES           CACTVS               3.385 "Nc1ncnc2n(C[CH]3CCCN(C3)Cc4cccc(c4)[S](F)(=O)=O)c(Sc5cc6OCOc6cc5I)nc12"                                                                                                                                             
Q2A SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)S(=O)(=O)F)CN2CCC[C@@H](C2)Cn3c4c(c(ncn4)N)nc3Sc5cc6c(cc5I)OCO6"                                                                                                                                         
Q2A SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)S(=O)(=O)F)CN2CCCC(C2)Cn3c4c(c(ncn4)N)nc3Sc5cc6c(cc5I)OCO6"                                                                                                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
Q2A "SYSTEMATIC NAME" ACDLabs              12.01 "3-{[(3S)-3-({6-amino-8-[(6-iodo-2H-1,3-benzodioxol-5-yl)sulfanyl]-9H-purin-9-yl}methyl)piperidin-1-yl]methyl}benzene-1-sulfonyl fluoride" 
Q2A "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "3-[[(3~{S})-3-[[6-azanyl-8-[(6-iodanyl-1,3-benzodioxol-5-yl)sulfanyl]purin-9-yl]methyl]piperidin-1-yl]methyl]benzenesulfonyl fluoride"    
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Q2A "Create component" 2019-09-10 RCSB 
Q2A "Initial release"  2020-02-19 RCSB 
Q2A "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            Q2A 
_pdbx_chem_comp_pcm.modified_residue_id                LYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               S1 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   NZ 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
