data_ODA
# 
_chem_comp.id                                    ODA 
_chem_comp.name                                  "9-AMINO-6,10-DIOXO-OCTAHYDRO-PYRIDAZINO[1,2-A][1,2]DIAZEPINE-1-CARBOXYLIC ACID" 
_chem_comp.type                                  PEPTIDE-LIKE 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C10 H15 N3 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     1999-10-14 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        241.244 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ODA 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1D5Z 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
ODA N    N    N 0 1 N N N Y Y N 19.926 33.268 27.674 1.994  0.348  1.475  N    ODA 1  
ODA CA   CA   C 0 1 N N S Y N N 19.130 32.085 27.848 1.429  1.509  0.773  CA   ODA 2  
ODA CB   CB   C 0 1 N N N N N N 17.716 32.229 27.282 2.403  1.947  -0.420 CB   ODA 3  
ODA CG   CG   C 0 1 N N N N N N 17.014 30.910 27.144 1.980  0.742  -1.379 CG   ODA 4  
ODA CD   CD   C 0 1 N N N N N N 17.334 29.926 28.278 1.940  -0.505 -0.566 CD   ODA 5  
ODA OE1  OE1  O 0 1 N N N N N N 16.463 29.708 29.143 2.986  -1.076 -0.337 OE1  ODA 6  
ODA NE2  NE2  N 0 1 N N N N N N 18.564 29.373 28.315 0.852  -1.010 -0.093 NE2  ODA 7  
ODA C2   C    C 0 1 N N N Y N N 19.924 31.006 27.106 0.112  1.148  0.178  C    ODA 8  
ODA O2   O    O 0 1 N N N N N N 20.813 31.293 26.279 -0.668 2.048  -0.051 O    ODA 9  
ODA N2   N2   N 0 1 N N N Y N N 19.626 29.747 27.394 -0.257 -0.053 -0.111 N2   ODA 10 
ODA CA2  CA2  C 0 1 N N S Y N N 20.384 28.677 26.756 -1.579 -0.546 -0.452 CA2  ODA 11 
ODA CB2  CB2  C 0 1 N N N N N N 20.709 27.561 27.766 -1.840 -1.871 0.272  CB2  ODA 12 
ODA CG2  CG2  C 0 1 N N N N N N 19.563 27.168 28.675 -0.732 -2.866 -0.085 CG2  ODA 13 
ODA CD2  CD2  C 0 1 N N N N N N 18.981 28.402 29.339 0.607  -2.336 0.440  CD2  ODA 14 
ODA C    C2   C 0 1 N N N Y N Y 19.720 28.131 25.499 -2.614 0.466  -0.033 C2   ODA 15 
ODA O    O2   O 0 1 N N N Y N Y 18.516 28.259 25.324 -2.509 1.035  1.027  O2   ODA 16 
ODA OXT  OXT  O 0 1 N Y N Y N Y 20.528 27.676 24.548 -3.654 0.735  -0.839 OXT  ODA 17 
ODA H    H    H 0 1 N N N Y Y N 20.836 33.118 28.061 2.932  0.539  1.791  H    ODA 18 
ODA H2   H2   H 0 1 N Y N Y Y N 20.008 33.474 26.699 1.403  0.068  2.243  H2   ODA 19 
ODA HA   HA1  H 0 1 N N N Y N N 18.968 31.853 28.911 1.305  2.337  1.471  HA1  ODA 20 
ODA HB2  HB2  H 0 1 N N N N N N 17.131 32.865 27.963 2.137  2.919  -0.836 HB2  ODA 21 
ODA HB3  HB3  H 0 1 N N N N N N 17.785 32.693 26.287 3.454  1.900  -0.135 HB3  ODA 22 
ODA HG2  HG2  H 0 1 N N N N N N 15.930 31.096 27.147 0.995  0.936  -1.802 HG2  ODA 23 
ODA HG3  HG3  H 0 1 N N N N N N 17.328 30.452 26.194 2.712  0.635  -2.180 HG3  ODA 24 
ODA HA2  HA2  H 0 1 N N N Y N N 21.331 29.121 26.415 -1.641 -0.703 -1.528 HA2  ODA 25 
ODA HB23 HB23 H 0 0 N N N N N N 21.003 26.668 27.194 -1.846 -1.703 1.349  HB23 ODA 26 
ODA HB22 HB22 H 0 0 N N N N N N 21.533 27.916 28.402 -2.805 -2.273 -0.040 HB22 ODA 27 
ODA HG23 HG23 H 0 0 N N N N N N 18.781 26.672 28.081 -0.946 -3.831 0.373  HG23 ODA 28 
ODA HG22 HG22 H 0 0 N N N N N N 19.933 26.479 29.449 -0.679 -2.980 -1.168 HG22 ODA 29 
ODA HD22 HD22 H 0 0 N N N N N N 19.743 28.860 29.986 1.409  -3.005 0.129  HD22 ODA 30 
ODA HD23 HD23 H 0 0 N N N N N N 18.108 28.113 29.943 0.576  -2.289 1.528  HD23 ODA 31 
ODA HXT  HXT  H 0 1 N Y N Y N Y 20.022 27.485 23.767 -4.292 1.392  -0.528 HXT  ODA 32 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
ODA N   CA   SING N N 1  
ODA N   H    SING N N 2  
ODA N   H2   SING N N 3  
ODA CA  CB   SING N N 4  
ODA CA  C2   SING N N 5  
ODA CA  HA   SING N N 6  
ODA CB  CG   SING N N 7  
ODA CB  HB2  SING N N 8  
ODA CB  HB3  SING N N 9  
ODA CG  CD   SING N N 10 
ODA CG  HG2  SING N N 11 
ODA CG  HG3  SING N N 12 
ODA CD  OE1  DOUB N N 13 
ODA CD  NE2  SING N N 14 
ODA NE2 N2   SING N N 15 
ODA NE2 CD2  SING N N 16 
ODA C2  O2   DOUB N N 17 
ODA C2  N2   SING N N 18 
ODA N2  CA2  SING N N 19 
ODA CA2 CB2  SING N N 20 
ODA CA2 C    SING N N 21 
ODA CA2 HA2  SING N N 22 
ODA CB2 CG2  SING N N 23 
ODA CB2 HB23 SING N N 24 
ODA CB2 HB22 SING N N 25 
ODA CG2 CD2  SING N N 26 
ODA CG2 HG23 SING N N 27 
ODA CG2 HG22 SING N N 28 
ODA CD2 HD22 SING N N 29 
ODA CD2 HD23 SING N N 30 
ODA C   O    DOUB N N 31 
ODA C   OXT  SING N N 32 
ODA OXT HXT  SING N N 33 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
ODA SMILES           ACDLabs              12.01 "O=C(O)C2N1C(=O)C(N)CCC(=O)N1CCC2"                                                                          
ODA SMILES_CANONICAL CACTVS               3.370 "N[C@H]1CCC(=O)N2CCC[C@H](N2C1=O)C(O)=O"                                                                    
ODA SMILES           CACTVS               3.370 "N[CH]1CCC(=O)N2CCC[CH](N2C1=O)C(O)=O"                                                                      
ODA SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "C1C[C@H](N2C(=O)[C@H](CCC(=O)N2C1)N)C(=O)O"                                                                
ODA SMILES           "OpenEye OEToolkits" 1.7.0 "C1CC(N2C(=O)C(CCC(=O)N2C1)N)C(=O)O"                                                                        
ODA InChI            InChI                1.03  "InChI=1S/C10H15N3O4/c11-6-3-4-8(14)12-5-1-2-7(10(16)17)13(12)9(6)15/h6-7H,1-5,11H2,(H,16,17)/t6-,7-/m0/s1" 
ODA InChIKey         InChI                1.03  NWQJXXUYZOCKFS-BQBZGAKWSA-N                                                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
ODA "SYSTEMATIC NAME" ACDLabs              12.01 "(1S,9S)-9-amino-6,10-dioxooctahydro-6H-pyridazino[1,2-a][1,2]diazepine-1-carboxylic acid"               
ODA "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(1S,9S)-9-azanyl-6,10-dioxo-2,3,4,7,8,9-hexahydro-1H-pyridazino[1,2-a][1,2]diazepine-1-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
ODA "Create component"  1999-10-14 PDBJ 
ODA "Modify descriptor" 2011-06-04 RCSB 
ODA "Modify backbone"   2023-11-03 PDBE 
ODA "Modify PCM"        2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            ODA 
_pdbx_chem_comp_pcm.modified_residue_id                ? 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Non-standard residue" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain and backbone" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
