data_M9A
#

_chem_comp.id                                   M9A
_chem_comp.name                                 "5-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenoxy}-7-fluoronaphthalene-2-carbonitrile"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C23 H16 F N3 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-03-27
_chem_comp.pdbx_modified_date                   2019-05-10
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       417.389
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    M9A
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6OE3
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
M9A  C1   C1   C  0  1  Y  N  N  440.490   -8.866  229.762  -3.917  -2.286  -0.383  C1   M9A   1  
M9A  N1   N1   N  0  1  N  N  N  435.942  -12.634  224.983   3.176  -1.173   1.194  N1   M9A   2  
M9A  O1   O1   O  0  1  N  N  N  436.957  -10.233  223.861   1.678   1.184   0.435  O1   M9A   3  
M9A  C2   C2   C  0  1  Y  N  N  440.578   -9.901  228.832  -2.842  -2.204  -1.285  C2   M9A   4  
M9A  N2   N2   N  0  1  N  N  N  436.814  -14.773  224.764   2.397  -2.867  -0.222  N2   M9A   5  
M9A  O2   O2   O  0  1  N  N  N  438.160  -15.709  226.335   3.876  -4.148  -1.284  O2   M9A   6  
M9A  C3   C3   C  0  1  Y  N  N  440.088   -9.751  227.571  -2.044  -1.105  -1.320  C3   M9A   7  
M9A  O3   O3   O  0  1  N  N  N  435.413  -13.936  223.175   1.014  -1.535   0.882  O3   M9A   8  
M9A  C4   C4   C  0  1  Y  N  N  439.440   -8.558  227.171  -2.288  -0.031  -0.447  C4   M9A   9  
M9A  C5   C5   C  0  1  Y  N  N  438.885   -8.367  225.875  -1.473   1.120  -0.467  C5   M9A  10  
M9A  C6   C6   C  0  1  Y  N  N  438.985   -9.131  223.592   0.389   2.285  -1.241  C6   M9A  11  
M9A  C7   C7   C  0  1  Y  N  N  439.965   -8.551  222.802   0.165   3.399  -2.034  C7   M9A  12  
M9A  C8   C8   C  0  1  Y  N  N  439.746   -8.407  221.442   1.002   4.496  -1.938  C8   M9A  13  
M9A  C9   C9   C  0  1  Y  N  N  438.559   -8.827  220.874   2.063   4.483  -1.052  C9   M9A  14  
M9A  C10  C10  C  0  1  Y  N  N  437.571   -9.403  221.656   2.293   3.375  -0.258  C10  M9A  15  
M9A  C11  C11  C  0  1  Y  N  N  437.786   -9.565  223.013   1.454   2.275  -0.345  C11  M9A  16  
M9A  C12  C12  C  0  1  N  N  N  435.764  -10.812  223.325   2.797   1.240   1.323  C12  M9A  17  
M9A  C13  C13  C  0  1  N  N  N  435.115  -11.521  224.482   2.888  -0.068   2.112  C13  M9A  18  
M9A  C14  C14  C  0  1  N  N  N  436.620  -12.503  226.166   4.474  -1.510   0.925  C14  M9A  19  
M9A  C15  C15  C  0  1  N  N  N  437.390  -13.483  226.667   4.740  -2.528   0.079  C15  M9A  20  
M9A  C16  C16  C  0  1  N  N  N  437.517  -14.718  225.955   3.662  -3.229  -0.513  C16  M9A  21  
M9A  C17  C17  C  0  1  N  N  N  436.016  -13.787  224.229   2.161  -1.851   0.628  C17  M9A  22  
M9A  C18  C18  C  0  1  Y  N  N  438.162   -7.241  225.570  -1.740   2.154   0.400  C18  M9A  23  
M9A  C19  C19  C  0  1  Y  N  N  438.002   -6.284  226.547  -2.805   2.078   1.297  C19  M9A  24  
M9A  C20  C20  C  0  1  Y  N  N  438.549   -6.357  227.785  -3.609   0.978   1.339  C20  M9A  25  
M9A  C21  C21  C  0  1  Y  N  N  439.285   -7.519  228.132  -3.369  -0.100   0.467  C21  M9A  26  
M9A  C22  C22  C  0  1  Y  N  N  439.832   -7.696  229.426  -4.187  -1.240   0.486  C22  M9A  27  
M9A  N    N3   N  0  1  N  N  N  441.759   -9.087  232.002  -5.399  -4.383  -0.352  N    M9A  28  
M9A  C    C23  C  0  1  N  N  N  441.187   -8.976  231.019  -4.744  -3.455  -0.366  C    M9A  29  
M9A  O    O4   O  0  1  N  N  N  439.145   -9.367  224.950  -0.432   1.206  -1.335  O    M9A  30  
M9A  F    F1   F  0  1  N  N  N  437.174   -5.240  226.266  -3.043   3.108   2.138  F    M9A  31  
M9A  H1   H1   H  0  1  N  N  N  441.041  -10.834  229.116  -2.647  -3.026  -1.959  H1   M9A  32  
M9A  H2   H2   H  0  1  N  N  N  436.894  -15.619  224.236   1.653  -3.339  -0.628  H2   M9A  33  
M9A  H3   H3   H  0  1  N  N  N  440.196  -10.558  226.862  -1.222  -1.057  -2.018  H3   M9A  34  
M9A  H4   H4   H  0  1  N  N  N  440.891   -8.214  223.243  -0.663   3.411  -2.727  H4   M9A  35  
M9A  H5   H5   H  0  1  N  N  N  440.509   -7.963  220.821   0.826   5.363  -2.556  H5   M9A  36  
M9A  H6   H6   H  0  1  N  N  N  438.400   -8.705  219.813   2.714   5.342  -0.980  H6   M9A  37  
M9A  H7   H7   H  0  1  N  N  N  436.641   -9.723  221.210   3.123   3.368   0.433  H7   M9A  38  
M9A  H8   H8   H  0  1  N  N  N  435.099  -10.030  222.930   3.711   1.380   0.746  H8   M9A  39  
M9A  H9   H9   H  0  1  N  N  N  436.008  -11.525  222.523   2.671   2.073   2.014  H9   M9A  40  
M9A  H10  H10  H  0  1  N  N  N  434.959  -10.800  225.298   1.941  -0.253   2.618  H10  M9A  41  
M9A  H11  H11  H  0  1  N  N  N  434.144  -11.920  224.154   3.686   0.008   2.851  H11  M9A  42  
M9A  H12  H12  H  0  1  N  N  N  436.532  -11.578  226.716   5.283  -0.963   1.387  H12  M9A  43  
M9A  H13  H13  H  0  1  N  N  N  437.911  -13.340  227.602   5.760  -2.804  -0.142  H13  M9A  44  
M9A  H14  H14  H  0  1  N  N  N  437.730   -7.109  224.589  -1.116   3.036   0.387  H14  M9A  45  
M9A  H15  H15  H  0  1  N  N  N  438.427   -5.549  228.491  -4.430   0.934   2.040  H15  M9A  46  
M9A  H16  H16  H  0  1  N  N  N  439.735   -6.909  230.159  -5.014  -1.306   1.177  H16  M9A  47  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
M9A  C9   C8   DOUB  Y  N   1  
M9A  C9   C10  SING  Y  N   2  
M9A  C8   C7   SING  Y  N   3  
M9A  C10  C11  DOUB  Y  N   4  
M9A  C7   C6   DOUB  Y  N   5  
M9A  C11  C6   SING  Y  N   6  
M9A  C11  O1   SING  N  N   7  
M9A  O3   C17  DOUB  N  N   8  
M9A  C12  O1   SING  N  N   9  
M9A  C12  C13  SING  N  N  10  
M9A  C6   O    SING  N  N  11  
M9A  C17  N2   SING  N  N  12  
M9A  C17  N1   SING  N  N  13  
M9A  C13  N1   SING  N  N  14  
M9A  N2   C16  SING  N  N  15  
M9A  O    C5   SING  N  N  16  
M9A  N1   C14  SING  N  N  17  
M9A  C18  C5   DOUB  Y  N  18  
M9A  C18  C19  SING  Y  N  19  
M9A  C5   C4   SING  Y  N  20  
M9A  C16  O2   DOUB  N  N  21  
M9A  C16  C15  SING  N  N  22  
M9A  C14  C15  DOUB  N  N  23  
M9A  F    C19  SING  N  N  24  
M9A  C19  C20  DOUB  Y  N  25  
M9A  C4   C3   DOUB  Y  N  26  
M9A  C4   C21  SING  Y  N  27  
M9A  C3   C2   SING  Y  N  28  
M9A  C20  C21  SING  Y  N  29  
M9A  C21  C22  DOUB  Y  N  30  
M9A  C2   C1   DOUB  Y  N  31  
M9A  C22  C1   SING  Y  N  32  
M9A  C1   C    SING  N  N  33  
M9A  C    N    TRIP  N  N  34  
M9A  C2   H1   SING  N  N  35  
M9A  N2   H2   SING  N  N  36  
M9A  C3   H3   SING  N  N  37  
M9A  C7   H4   SING  N  N  38  
M9A  C8   H5   SING  N  N  39  
M9A  C9   H6   SING  N  N  40  
M9A  C10  H7   SING  N  N  41  
M9A  C12  H8   SING  N  N  42  
M9A  C12  H9   SING  N  N  43  
M9A  C13  H10  SING  N  N  44  
M9A  C13  H11  SING  N  N  45  
M9A  C14  H12  SING  N  N  46  
M9A  C15  H13  SING  N  N  47  
M9A  C18  H14  SING  N  N  48  
M9A  C20  H15  SING  N  N  49  
M9A  C22  H16  SING  N  N  50  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
M9A  SMILES            ACDLabs               12.01  "c4(C#N)ccc1c(cc(cc1Oc3ccccc3OCCN2C=CC(NC2=O)=O)F)c4"  
M9A  InChI             InChI                 1.03   "InChI=1S/C23H16FN3O4/c24-17-12-16-11-15(14-25)5-6-18(16)21(13-17)31-20-4-2-1-3-19(20)30-10-9-27-8-7-22(28)26-23(27)29/h1-8,11-13H,9-10H2,(H,26,28,29)"  
M9A  InChIKey          InChI                 1.03   CZZSYVLCOGCXLL-UHFFFAOYSA-N  
M9A  SMILES_CANONICAL  CACTVS                3.385  "Fc1cc(Oc2ccccc2OCCN3C=CC(=O)NC3=O)c4ccc(cc4c1)C#N"  
M9A  SMILES            CACTVS                3.385  "Fc1cc(Oc2ccccc2OCCN3C=CC(=O)NC3=O)c4ccc(cc4c1)C#N"  
M9A  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1ccc(c(c1)OCCN2C=CC(=O)NC2=O)Oc3cc(cc4c3ccc(c4)C#N)F"  
M9A  SMILES            "OpenEye OEToolkits"  2.0.7  "c1ccc(c(c1)OCCN2C=CC(=O)NC2=O)Oc3cc(cc4c3ccc(c4)C#N)F"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
M9A  "SYSTEMATIC NAME"  ACDLabs               12.01  "5-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenoxy}-7-fluoronaphthalene-2-carbonitrile"  
M9A  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "5-[2-[2-[2,4-bis(oxidanylidene)pyrimidin-1-yl]ethoxy]phenoxy]-7-fluoranyl-naphthalene-2-carbonitrile"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
M9A  "Create component"  2019-03-27  RCSB  
M9A  "Initial release"   2019-05-15  RCSB  
##
