data_LXA
#

_chem_comp.id                                   LXA
_chem_comp.name                                 "~{N}-(1~{H}-benzimidazol-2-ylmethyl)-2-methoxy-ethanamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C11 H13 N3 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-03-15
_chem_comp.pdbx_modified_date                   2020-04-24
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       219.240
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    LXA
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5QQ3
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LXA  N1   N1   N  0  1  Y  N  N  -28.535   -9.385  -31.557  -1.546   1.019   0.731  N1   LXA   1  
LXA  C4   C1   C  0  1  Y  N  N  -28.385  -10.553  -32.210  -0.781   0.664  -0.337  C4   LXA   2  
LXA  C5   C2   C  0  1  Y  N  N  -27.891   -8.381  -32.278  -2.772   0.401   0.581  C5   LXA   3  
LXA  C6   C3   C  0  1  Y  N  N  -27.782   -6.981  -32.021  -3.940   0.376   1.331  C6   LXA   4  
LXA  C7   C4   C  0  1  Y  N  N  -27.060   -6.207  -32.928  -5.018  -0.362   0.891  C7   LXA   5  
LXA  C8   C5   C  0  1  Y  N  N  -26.463   -6.832  -34.078  -4.942  -1.079  -0.294  C8   LXA   6  
LXA  C10  C6   C  0  1  Y  N  N  -27.333   -9.001  -33.379  -2.696  -0.325  -0.619  C10  LXA   7  
LXA  N    N2   N  0  1  N  N  N  -28.884  -12.866  -32.725   1.562   0.100  -0.052  N    LXA   8  
LXA  C    C7   C  0  1  N  N  N  -29.782  -14.714  -37.095   6.175  -1.248   0.630  C    LXA   9  
LXA  O    O1   O  0  1  N  N  N  -29.894  -13.765  -36.080   5.189  -0.326   0.160  O    LXA  10  
LXA  C1   C8   C  0  1  N  N  N  -29.355  -14.110  -34.810   3.843  -0.753   0.380  C1   LXA  11  
LXA  C2   C9   C  0  1  N  N  N  -29.683  -12.949  -33.869   2.893   0.289  -0.151  C2   LXA  12  
LXA  C3   C10  C  0  1  N  N  N  -29.009  -11.842  -31.704   0.638   1.113  -0.569  C3   LXA  13  
LXA  C9   C11  C  0  1  Y  N  N  -26.575   -8.227  -34.323  -3.801  -1.066  -1.045  C9   LXA  14  
LXA  N2   N3   N  0  1  Y  N  N  -27.652  -10.395  -33.349  -1.453  -0.120  -1.128  N2   LXA  15  
LXA  O1   O2   O  0  1  N  N  N  -30.567  -12.164  -34.102   3.326   1.297  -0.668  O1   LXA  16  
LXA  H1   H1   H  0  1  N  N  N  -29.028   -9.259  -30.696  -1.278   1.596   1.463  H1   LXA  17  
LXA  H2   H2   H  0  1  N  N  N  -28.244   -6.536  -31.152  -4.003   0.932   2.255  H2   LXA  18  
LXA  H3   H3   H  0  1  N  N  N  -26.949   -5.145  -32.768  -5.927  -0.383   1.474  H3   LXA  19  
LXA  H4   H4   H  0  1  N  N  N  -25.912   -6.221  -34.778  -5.794  -1.654  -0.627  H4   LXA  20  
LXA  H5   H5   H  0  1  N  N  N  -28.176  -13.561  -32.601   1.216  -0.706   0.361  H5   LXA  21  
LXA  H6   H6   H  0  1  N  N  N  -30.236  -14.321  -38.017   7.170  -0.852   0.425  H6   LXA  22  
LXA  H7   H7   H  0  1  N  N  N  -28.719  -14.934  -37.275   6.055  -1.392   1.703  H7   LXA  23  
LXA  H8   H8   H  0  1  N  N  N  -30.302  -15.636  -36.794   6.053  -2.203   0.119  H8   LXA  24  
LXA  H9   H9   H  0  1  N  N  N  -29.815  -15.039  -34.442   3.672  -1.697  -0.136  H9   LXA  25  
LXA  H10  H10  H  0  1  N  N  N  -28.266  -14.244  -34.883   3.675  -0.887   1.449  H10  LXA  26  
LXA  H11  H11  H  0  1  N  N  N  -30.073  -11.673  -31.481   0.807   1.247  -1.638  H11  LXA  27  
LXA  H12  H12  H  0  1  N  N  N  -28.490  -12.168  -30.791   0.810   2.058  -0.053  H12  LXA  28  
LXA  H13  H13  H  0  1  N  N  N  -26.110   -8.686  -35.183  -3.753  -1.628  -1.967  H13  LXA  29  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LXA  C    O    SING  N  N   1  
LXA  O    C1   SING  N  N   2  
LXA  C1   C2   SING  N  N   3  
LXA  C9   C8   DOUB  Y  N   4  
LXA  C9   C10  SING  Y  N   5  
LXA  O1   C2   DOUB  N  N   6  
LXA  C8   C7   SING  Y  N   7  
LXA  C2   N    SING  N  N   8  
LXA  C10  N2   SING  Y  N   9  
LXA  C10  C5   DOUB  Y  N  10  
LXA  N2   C4   DOUB  Y  N  11  
LXA  C7   C6   DOUB  Y  N  12  
LXA  N    C3   SING  N  N  13  
LXA  C5   C6   SING  Y  N  14  
LXA  C5   N1   SING  Y  N  15  
LXA  C4   C3   SING  N  N  16  
LXA  C4   N1   SING  Y  N  17  
LXA  N1   H1   SING  N  N  18  
LXA  C6   H2   SING  N  N  19  
LXA  C7   H3   SING  N  N  20  
LXA  C8   H4   SING  N  N  21  
LXA  N    H5   SING  N  N  22  
LXA  C    H6   SING  N  N  23  
LXA  C    H7   SING  N  N  24  
LXA  C    H8   SING  N  N  25  
LXA  C1   H9   SING  N  N  26  
LXA  C1   H10  SING  N  N  27  
LXA  C3   H11  SING  N  N  28  
LXA  C3   H12  SING  N  N  29  
LXA  C9   H13  SING  N  N  30  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LXA  InChI             InChI                 1.03   "InChI=1S/C11H13N3O2/c1-16-7-11(15)12-6-10-13-8-4-2-3-5-9(8)14-10/h2-5H,6-7H2,1H3,(H,12,15)(H,13,14)"  
LXA  InChIKey          InChI                 1.03   LZINBAGZNCYRNQ-UHFFFAOYSA-N  
LXA  SMILES_CANONICAL  CACTVS                3.385  "COCC(=O)NCc1[nH]c2ccccc2n1"  
LXA  SMILES            CACTVS                3.385  "COCC(=O)NCc1[nH]c2ccccc2n1"  
LXA  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "COCC(=O)NCc1[nH]c2ccccc2n1"  
LXA  SMILES            "OpenEye OEToolkits"  2.0.6  "COCC(=O)NCc1[nH]c2ccccc2n1"  
#
_pdbx_chem_comp_identifier.comp_id          LXA
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.6
_pdbx_chem_comp_identifier.identifier       "~{N}-(1~{H}-benzimidazol-2-ylmethyl)-2-methoxy-ethanamide"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LXA  "Create component"  2019-03-15  RCSB  
LXA  "Initial release"   2020-04-29  RCSB  
##
