data_KNA
# 
_chem_comp.id                                    KNA 
_chem_comp.name                                  "nonanoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C9 H18 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-09-30 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        158.238 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     KNA 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3SZ1 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
KNA C1  C1  C 0 1 N N N N N N 17.452 5.837 13.996 3.924  -0.101 0.001  C1  KNA 1  
KNA O1  O1  O 0 1 N N N N N N 18.440 5.649 14.713 5.122  0.504  0.000  O1  KNA 2  
KNA C2  C2  C 0 1 N N N N N N 16.063 5.655 14.580 2.663  0.724  -0.000 C2  KNA 3  
KNA O2  O2  O 0 1 N N N N N N 17.589 6.216 12.691 3.856  -1.307 -0.002 O2  KNA 4  
KNA C3  C3  C 0 1 N N N N N N 15.028 5.076 13.595 1.446  -0.204 0.001  C3  KNA 5  
KNA C4  C4  C 0 1 N N N N N N 13.710 4.846 14.357 0.166  0.634  -0.001 C4  KNA 6  
KNA C5  C5  C 0 1 N N N N N N 12.844 3.759 13.701 -1.051 -0.294 0.001  C5  KNA 7  
KNA C6  C6  C 0 1 N N N N N N 12.410 2.717 14.746 -2.331 0.544  -0.001 C6  KNA 8  
KNA C7  C7  C 0 1 N N N N N N 10.878 2.631 14.751 -3.547 -0.384 0.001  C7  KNA 9  
KNA C8  C8  C 0 1 N N N N N N 10.289 2.322 16.150 -4.828 0.453  -0.001 C8  KNA 10 
KNA C9  C9  C 0 1 N N N N N N 8.856  2.847 16.220 -6.044 -0.475 0.001  C9  KNA 11 
KNA HO1 HO1 H 0 1 N N N N N N 19.231 5.809 14.211 5.902  -0.067 0.002  HO1 KNA 12 
KNA H2  H2  H 0 1 N N N N N N 16.143 4.962 15.431 2.640  1.355  0.888  H2  KNA 13 
KNA H2A H2A H 0 1 N N N N N N 15.703 6.642 14.907 2.640  1.352  -0.891 H2A KNA 14 
KNA H3  H3  H 0 1 N N N N N N 14.863 5.783 12.768 1.469  -0.834 -0.888 H3  KNA 15 
KNA H3A H3A H 0 1 N N N N N N 15.394 4.123 13.186 1.469  -0.831 0.892  H3A KNA 16 
KNA H4  H4  H 0 1 N N N N N N 13.949 4.532 15.384 0.143  1.264  0.888  H4  KNA 17 
KNA H4A H4A H 0 1 N N N N N N 13.142 5.788 14.368 0.143  1.261  -0.892 H4A KNA 18 
KNA H5  H5  H 0 1 N N N N N N 11.949 4.225 13.263 -1.028 -0.924 -0.888 H5  KNA 19 
KNA H5A H5A H 0 1 N N N N N N 13.427 3.259 12.913 -1.028 -0.921 0.892  H5A KNA 20 
KNA H6  H6  H 0 1 N N N N N N 12.836 1.736 14.490 -2.354 1.174  0.888  H6  KNA 21 
KNA H6A H6A H 0 1 N N N N N N 12.768 3.019 15.741 -2.353 1.171  -0.892 H6A KNA 22 
KNA H7  H7  H 0 1 N N N N N N 10.478 3.599 14.415 -3.525 -1.015 -0.888 H7  KNA 23 
KNA H7A H7A H 0 1 N N N N N N 10.576 1.826 14.065 -3.525 -1.012 0.892  H7A KNA 24 
KNA H8  H8  H 0 1 N N N N N N 10.291 1.235 16.318 -4.851 1.084  0.888  H8  KNA 25 
KNA H8A H8A H 0 1 N N N N N N 10.899 2.813 16.923 -4.850 1.081  -0.892 H8A KNA 26 
KNA H9  H9  H 0 1 N N N N N N 8.433  2.630 17.212 -6.021 -1.105 -0.888 H9  KNA 27 
KNA H9A H9A H 0 1 N N N N N N 8.855  3.934 16.051 -6.022 -1.102 0.891  H9A KNA 28 
KNA H9B H9B H 0 1 N N N N N N 8.247  2.355 15.447 -6.956 0.122  -0.001 H9B KNA 29 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
KNA O2 C1  DOUB N N 1  
KNA C1 C2  SING N N 2  
KNA C1 O1  SING N N 3  
KNA O1 HO1 SING N N 4  
KNA C3 C2  SING N N 5  
KNA C2 H2  SING N N 6  
KNA C2 H2A SING N N 7  
KNA C3 C4  SING N N 8  
KNA C3 H3  SING N N 9  
KNA C3 H3A SING N N 10 
KNA C5 C4  SING N N 11 
KNA C4 H4  SING N N 12 
KNA C4 H4A SING N N 13 
KNA C5 C6  SING N N 14 
KNA C5 H5  SING N N 15 
KNA C5 H5A SING N N 16 
KNA C6 C7  SING N N 17 
KNA C6 H6  SING N N 18 
KNA C6 H6A SING N N 19 
KNA C7 C8  SING N N 20 
KNA C7 H7  SING N N 21 
KNA C7 H7A SING N N 22 
KNA C8 C9  SING N N 23 
KNA C8 H8  SING N N 24 
KNA C8 H8A SING N N 25 
KNA C9 H9  SING N N 26 
KNA C9 H9A SING N N 27 
KNA C9 H9B SING N N 28 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
KNA SMILES           ACDLabs              12.01 "O=C(O)CCCCCCCC"                                                 
KNA InChI            InChI                1.03  "InChI=1S/C9H18O2/c1-2-3-4-5-6-7-8-9(10)11/h2-8H2,1H3,(H,10,11)" 
KNA InChIKey         InChI                1.03  FBUKVWPVBMHYJY-UHFFFAOYSA-N                                      
KNA SMILES_CANONICAL CACTVS               3.370 "CCCCCCCCC(O)=O"                                                 
KNA SMILES           CACTVS               3.370 "CCCCCCCCC(O)=O"                                                 
KNA SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "CCCCCCCCC(=O)O"                                                 
KNA SMILES           "OpenEye OEToolkits" 1.7.2 "CCCCCCCCC(=O)O"                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
KNA "SYSTEMATIC NAME" ACDLabs              12.01 "nonanoic acid" 
KNA "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "nonanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
KNA "Create component" 2011-09-30 RCSB 
KNA "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            KNA 
_pdbx_chem_comp_pcm.modified_residue_id                GGL 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           Lipid/lipid-like 
_pdbx_chem_comp_pcm.position                           "Amino-acid backbone" 
_pdbx_chem_comp_pcm.polypeptide_position               N-terminal 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C1 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   N 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
