data_J3A
# 
_chem_comp.id                                    J3A 
_chem_comp.name                                  "6-(4-methylpiperazin-1-yl)-N-(5-methyl-1H-pyrazol-3-yl)-2-[(E)-2-phenylethenyl]pyrimidin-4-amine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H25 N7" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2018-08-06 
_chem_comp.pdbx_modified_date                    2018-08-17 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        375.470 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     J3A 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6EAS 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
J3A C4  C1  C 0 1 Y N N -0.403 2.272  18.639 4.407  -2.152 0.279  C4  J3A 1  
J3A C14 C2  C 0 1 N N N -0.298 3.535  29.168 -5.413 -1.624 -0.917 C14 J3A 2  
J3A C5  C3  C 0 1 Y N N -1.213 2.189  17.518 5.283  -3.214 0.363  C5  J3A 3  
J3A C6  C4  C 0 1 Y N N -2.573 2.015  17.654 4.824  -4.509 0.198  C6  J3A 4  
J3A C11 C5  C 0 1 Y N N 1.965  3.310  25.628 -1.906 1.668  -0.234 C11 J3A 5  
J3A C7  C6  C 0 1 N N N -0.085 2.268  21.108 2.110  -1.257 -0.059 C7  J3A 6  
J3A C8  C7  C 0 1 N N N -0.404 2.848  22.253 0.809  -1.485 -0.302 C8  J3A 7  
J3A C9  C8  C 0 1 Y N N 0.468  3.005  23.434 -0.152 -0.370 -0.278 C9  J3A 8  
J3A C10 C9  C 0 1 Y N N 0.587  3.588  25.655 -2.343 0.355  -0.394 C10 J3A 9  
J3A C12 C10 C 0 1 Y N N 2.518  2.853  24.432 -0.539 1.902  -0.103 C12 J3A 10 
J3A C13 C11 C 0 1 N N N 0.553  4.167  28.085 -3.922 -1.367 -0.687 C13 J3A 11 
J3A N1  N1  N 0 1 Y N N -0.147 3.430  24.543 -1.448 -0.628 -0.411 N1  J3A 12 
J3A N2  N2  N 0 1 Y N N 1.775  2.726  23.335 0.300  0.871  -0.135 N2  J3A 13 
J3A C3  C12 C 0 1 Y N N -0.941 2.174  19.921 3.053  -2.386 0.027  C3  J3A 14 
J3A N3  N3  N 0 1 N N N -0.063 4.055  26.767 -3.694 0.077  -0.533 N3  J3A 15 
J3A C1  C13 C 0 1 Y N N -3.129 1.924  18.911 3.484  -4.748 -0.052 C1  J3A 16 
J3A C2  C14 C 0 1 Y N N -2.324 2.010  20.035 2.598  -3.696 -0.145 C2  J3A 17 
J3A N4  N4  N 0 1 N N N -1.580 3.071  28.641 -6.180 -1.092 0.218  N4  J3A 18 
J3A C15 C15 C 0 1 N N N -2.231 4.164  27.924 -5.953 0.352  0.373  C15 J3A 19 
J3A C16 C16 C 0 1 N N N -1.424 4.581  26.712 -4.461 0.609  0.602  C16 J3A 20 
J3A C17 C17 C 0 1 N N N -2.441 2.558  29.709 -5.855 -1.811 1.457  C17 J3A 21 
J3A N5  N5  N 0 1 N N N 3.875  2.557  24.366 -0.060 3.194  0.057  N5  J3A 22 
J3A C18 C18 C 0 1 Y N N 4.595  1.941  23.356 1.320  3.433  0.067  C18 J3A 23 
J3A N6  N6  N 0 1 Y N N 5.872  1.612  23.534 1.898  4.609  0.120  N6  J3A 24 
J3A N7  N7  N 0 1 Y N N 6.255  1.067  22.350 3.286  4.415  0.111  N7  J3A 25 
J3A C19 C19 C 0 1 Y N N 5.269  1.051  21.455 3.522  3.088  0.050  C19 J3A 26 
J3A C20 C20 C 0 1 Y N N 4.178  1.629  22.055 2.327  2.454  0.028  C20 J3A 27 
J3A C21 C21 C 0 1 N N N 5.464  0.494  20.088 4.876  2.428  0.022  C21 J3A 28 
J3A H1  H1  H 0 1 N N N 0.661  2.415  18.518 4.767  -1.142 0.413  H1  J3A 29 
J3A H2  H2  H 0 1 N N N 0.244  2.678  29.594 -5.731 -1.128 -1.834 H2  J3A 30 
J3A H3  H3  H 0 1 N N N -0.484 4.280  29.956 -5.588 -2.696 -1.003 H3  J3A 31 
J3A H4  H4  H 0 1 N N N -0.776 2.261  16.533 6.330  -3.035 0.558  H4  J3A 32 
J3A H5  H5  H 0 1 N N N -3.201 1.950  16.778 5.514  -5.337 0.265  H5  J3A 33 
J3A H6  H6  H 0 1 N N N 2.577  3.446  26.507 -2.611 2.487  -0.216 H6  J3A 34 
J3A H7  H7  H 0 1 N N N 0.897  1.822  21.041 2.465  -0.245 0.073  H7  J3A 35 
J3A H8  H8  H 0 1 N N N -1.404 3.247  22.332 0.467  -2.488 -0.514 H8  J3A 36 
J3A H9  H9  H 0 1 N N N 1.531  3.664  28.063 -3.598 -1.885 0.216  H9  J3A 37 
J3A H10 H10 H 0 1 N N N 0.694  5.232  28.321 -3.354 -1.735 -1.541 H10 J3A 38 
J3A H11 H11 H 0 1 N N N -4.194 1.785  19.020 3.133  -5.761 -0.180 H11 J3A 39 
J3A H12 H12 H 0 1 N N N -2.773 1.949  21.016 1.552  -3.884 -0.340 H12 J3A 40 
J3A H14 H14 H 0 1 N N N -2.334 5.026  28.600 -6.277 0.870  -0.530 H14 J3A 41 
J3A H15 H15 H 0 1 N N N -3.228 3.834  27.595 -6.522 0.720  1.227  H15 J3A 42 
J3A H16 H16 H 0 1 N N N -1.381 5.679  26.672 -4.144 0.114  1.520  H16 J3A 43 
J3A H17 H17 H 0 1 N N N -1.918 4.200  25.806 -4.286 1.682  0.688  H17 J3A 44 
J3A H18 H18 H 0 1 N N N -1.928 1.737  30.232 -4.792 -1.703 1.672  H18 J3A 45 
J3A H19 H19 H 0 1 N N N -2.661 3.366  30.422 -6.436 -1.398 2.281  H19 J3A 46 
J3A H20 H20 H 0 1 N N N -3.381 2.185  29.275 -6.095 -2.868 1.337  H20 J3A 47 
J3A H21 H21 H 0 1 N N N 4.410  2.829  25.166 -0.681 3.932  0.163  H21 J3A 48 
J3A H23 H23 H 0 1 N N N 3.206  1.806  21.618 2.174  1.386  -0.019 H23 J3A 49 
J3A H24 H24 H 0 1 N N N 5.811  1.290  19.413 5.201  2.309  -1.012 H24 J3A 50 
J3A H25 H25 H 0 1 N N N 6.214  -0.310 20.123 5.594  3.048  0.559  H25 J3A 51 
J3A H26 H26 H 0 1 N N N 4.510  0.090  19.717 4.813  1.449  0.498  H26 J3A 52 
J3A H13 H13 H 0 1 N N N 7.174  0.717  22.171 3.959  5.113  0.142  H13 J3A 53 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
J3A C5  C6  DOUB Y N 1  
J3A C5  C4  SING Y N 2  
J3A C6  C1  SING Y N 3  
J3A C4  C3  DOUB Y N 4  
J3A C1  C2  DOUB Y N 5  
J3A C3  C2  SING Y N 6  
J3A C3  C7  SING N N 7  
J3A C21 C19 SING N N 8  
J3A C7  C8  DOUB N E 9  
J3A C19 C20 DOUB Y N 10 
J3A C19 N7  SING Y N 11 
J3A C20 C18 SING Y N 12 
J3A C8  C9  SING N N 13 
J3A N7  N6  SING Y N 14 
J3A N2  C9  DOUB Y N 15 
J3A N2  C12 SING Y N 16 
J3A C18 N6  DOUB Y N 17 
J3A C18 N5  SING N N 18 
J3A C9  N1  SING Y N 19 
J3A N5  C12 SING N N 20 
J3A C12 C11 DOUB Y N 21 
J3A N1  C10 DOUB Y N 22 
J3A C11 C10 SING Y N 23 
J3A C10 N3  SING N N 24 
J3A C16 N3  SING N N 25 
J3A C16 C15 SING N N 26 
J3A N3  C13 SING N N 27 
J3A C15 N4  SING N N 28 
J3A C13 C14 SING N N 29 
J3A N4  C14 SING N N 30 
J3A N4  C17 SING N N 31 
J3A C4  H1  SING N N 32 
J3A C14 H2  SING N N 33 
J3A C14 H3  SING N N 34 
J3A C5  H4  SING N N 35 
J3A C6  H5  SING N N 36 
J3A C11 H6  SING N N 37 
J3A C7  H7  SING N N 38 
J3A C8  H8  SING N N 39 
J3A C13 H9  SING N N 40 
J3A C13 H10 SING N N 41 
J3A C1  H11 SING N N 42 
J3A C2  H12 SING N N 43 
J3A C15 H14 SING N N 44 
J3A C15 H15 SING N N 45 
J3A C16 H16 SING N N 46 
J3A C16 H17 SING N N 47 
J3A C17 H18 SING N N 48 
J3A C17 H19 SING N N 49 
J3A C17 H20 SING N N 50 
J3A N5  H21 SING N N 51 
J3A C20 H23 SING N N 52 
J3A C21 H24 SING N N 53 
J3A C21 H25 SING N N 54 
J3A C21 H26 SING N N 55 
J3A N7  H13 SING N N 56 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
J3A SMILES           ACDLabs              12.01 "c4c([C@H]=Cc1nc(cc(n1)Nc2nnc(c2)C)N3CCN(C)CC3)cccc4"                                                                                                           
J3A InChI            InChI                1.03  "InChI=1S/C21H25N7/c1-16-14-20(26-25-16)23-19-15-21(28-12-10-27(2)11-13-28)24-18(22-19)9-8-17-6-4-3-5-7-17/h3-9,14-15H,10-13H2,1-2H3,(H2,22,23,24,25,26)/b9-8+" 
J3A InChIKey         InChI                1.03  BLQYVHBZHAISJM-CMDGGOBGSA-N                                                                                                                                     
J3A SMILES_CANONICAL CACTVS               3.385 "CN1CCN(CC1)c2cc(Nc3cc(C)[nH]n3)nc(/C=C/c4ccccc4)n2"                                                                                                            
J3A SMILES           CACTVS               3.385 "CN1CCN(CC1)c2cc(Nc3cc(C)[nH]n3)nc(C=Cc4ccccc4)n2"                                                                                                              
J3A SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1cc(n[nH]1)Nc2cc(nc(n2)/C=C/c3ccccc3)N4CCN(CC4)C"                                                                                                            
J3A SMILES           "OpenEye OEToolkits" 2.0.6 "Cc1cc(n[nH]1)Nc2cc(nc(n2)C=Cc3ccccc3)N4CCN(CC4)C"                                                                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
J3A "SYSTEMATIC NAME" ACDLabs              12.01 "6-(4-methylpiperazin-1-yl)-N-(5-methyl-1H-pyrazol-3-yl)-2-[(E)-2-phenylethenyl]pyrimidin-4-amine"          
J3A "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "6-(4-methylpiperazin-1-yl)-~{N}-(5-methyl-1~{H}-pyrazol-3-yl)-2-[(~{E})-2-phenylethenyl]pyrimidin-4-amine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
J3A "Create component" 2018-08-06 RCSB 
J3A "Initial release"  2018-08-22 RCSB 
# 
