data_D4A
# 
_chem_comp.id                                    D4A 
_chem_comp.name                                  "(6R)-3-[(2-chlorophenyl)sulfanyl]-6-{6-[(4-fluorophenyl)amino]pyridin-2-yl}-4-hydroxy-6-(thiophen-3-yl)-5,6-dihydro-2H-pyran-2-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C26 H18 Cl F N2 O3 S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-10-17 
_chem_comp.pdbx_modified_date                    2018-10-19 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        525.014 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     D4A 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6BB3 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
D4A C4   C1  C  0 1 Y N N -15.588 -13.532 17.099 -5.340 -0.921 0.032  C4   D4A 1  
D4A C14  C2  C  0 1 Y N N -13.733 -11.965 22.651 -0.493 4.266  -1.210 C14  D4A 2  
D4A C5   C3  C  0 1 Y N N -13.210 -13.709 16.831 -4.508 -3.053 -0.704 C5   D4A 3  
D4A C6   C4  C  0 1 Y N N -15.645 -12.575 16.108 -6.549 -1.507 0.354  C6   D4A 4  
D4A C11  C5  C  0 1 Y N N -13.355 -16.163 20.312 -3.081 0.068  1.270  C11  D4A 5  
D4A C7   C6  C  0 1 Y N N -13.250 -12.745 15.844 -5.720 -3.634 -0.386 C7   D4A 6  
D4A C8   C7  C  0 1 Y N N -10.189 -15.635 18.573 4.598  -0.290 0.186  C8   D4A 7  
D4A C9   C8  C  0 1 Y N N -8.578  -17.674 17.660 6.314  -2.458 0.364  C9   D4A 8  
D4A C10  C9  C  0 1 Y N N -11.961 -14.948 21.784 -1.398 1.711  1.645  C10  D4A 9  
D4A C12  C10 C  0 1 Y N N -11.926 -10.581 23.015 0.263  4.490  0.942  C12  D4A 10 
D4A C13  C11 C  0 1 Y N N -12.838 -9.977  23.849 -0.061 5.770  0.752  C13  D4A 11 
D4A C3   C12 C  0 1 Y N N -12.539 -16.146 21.420 -2.508 1.012  2.102  C3   D4A 12 
D4A C1   C13 C  0 1 Y N N -10.742 -16.842 18.189 5.940  -0.091 0.445  C1   D4A 13 
D4A C2   C14 C  0 1 Y N N -9.940  -17.869 17.736 6.797  -1.173 0.533  C2   D4A 14 
D4A C15  C15 C  0 1 Y N N -12.414 -11.724 22.322 0.021  3.660  -0.139 C15  D4A 15 
D4A C16  C16 C  0 1 Y N N -14.380 -14.097 17.468 -4.316 -1.693 -0.501 C16  D4A 16 
D4A C17  C17 C  0 1 Y N N -14.469 -12.191 15.496 -6.740 -2.862 0.146  C17  D4A 17 
D4A C18  C18 C  0 1 Y N N -8.822  -15.440 18.514 4.108  -1.580 0.020  C18  D4A 18 
D4A C19  C19 C  0 1 Y N N -8.018  -16.467 18.045 4.972  -2.666 0.110  C19  D4A 19 
D4A C20  C20 C  0 1 Y N N -12.222 -13.808 21.045 -0.896 1.436  0.389  C20  D4A 20 
D4A C21  C21 C  0 1 Y N N -13.566 -14.994 19.610 -2.526 -0.154 0.014  C21  D4A 21 
D4A C22  C22 C  0 1 N N N -9.309  -13.114 19.887 1.744  -0.202 -0.329 C22  D4A 22 
D4A C23  C23 C  0 1 N N N -10.224 -12.287 19.367 1.228  0.304  -1.464 C23  D4A 23 
D4A C24  C24 C  0 1 N N N -9.327  -13.370 21.350 1.756  0.618  0.889  C24  D4A 24 
D4A C25  C25 C  0 1 N N N -11.312 -11.657 20.154 0.672  1.701  -1.515 C25  D4A 25 
D4A C26  C26 C  0 1 N N R -11.572 -12.493 21.392 0.316  2.182  -0.108 C26  D4A 26 
D4A N27  N1  N  0 1 Y N N -13.019 -13.825 19.969 -1.464 0.529  -0.384 N27  D4A 27 
D4A N28  N2  N  0 1 N N N -14.382 -15.075 18.475 -3.093 -1.101 -0.832 N28  D4A 28 
D4A O29  O1  O  0 1 N N N -8.527  -14.099 21.910 2.051  0.140  1.969  O29  D4A 29 
D4A O30  O2  O  0 1 N N N -10.316 -12.717 22.040 1.426  1.930  0.766  O30  D4A 30 
D4A O31  O3  O  0 1 N N N -10.274 -12.021 18.023 1.208  -0.458 -2.580 O31  D4A 31 
D4A F32  F1  F  0 1 N N N -14.522 -11.261 14.539 -7.925 -3.432 0.457  F32  D4A 32 
D4A S33  S1  S  0 1 Y N N -14.325 -10.819 23.783 -0.697 5.981  -0.875 S33  D4A 33 
D4A S34  S2  S  0 1 N N N -8.080  -13.903 18.978 2.395  -1.839 -0.302 S34  D4A 34 
D4A CL35 CL1 CL 0 0 N N N -6.297  -16.271 17.903 4.367  -4.279 -0.102 CL35 D4A 35 
D4A H1   H1  H  0 1 N N N -16.496 -13.844 17.593 -5.193 0.137  0.191  H1   D4A 36 
D4A H2   H2  H  0 1 N N N -14.320 -12.776 22.246 -0.741 3.780  -2.142 H2   D4A 37 
D4A H3   H3  H  0 1 N N N -12.269 -14.161 17.107 -3.713 -3.655 -1.119 H3   D4A 38 
D4A H4   H4  H  0 1 N N N -16.588 -12.136 15.817 -7.346 -0.907 0.768  H4   D4A 39 
D4A H5   H5  H  0 1 N N N -13.825 -17.082 19.995 -3.945 -0.494 1.594  H5   D4A 40 
D4A H6   H6  H  0 1 N N N -12.343 -12.428 15.351 -5.871 -4.691 -0.544 H6   D4A 41 
D4A H7   H7  H  0 1 N N N -10.830 -14.838 18.922 3.929  0.555  0.118  H7   D4A 42 
D4A H8   H8  H  0 1 N N N -7.942  -18.468 17.297 6.987  -3.300 0.434  H8   D4A 43 
D4A H9   H9  H  0 1 N N N -11.307 -14.900 22.642 -0.927 2.455  2.270  H9   D4A 44 
D4A H10  H10 H  0 1 N N N -10.917 -10.216 22.895 0.675  4.128  1.872  H10  D4A 45 
D4A H11  H11 H  0 1 N N N -12.644 -9.103  24.454 0.050  6.556  1.484  H11  D4A 46 
D4A H12  H12 H  0 1 N N N -12.356 -17.046 21.989 -2.914 1.202  3.084  H12  D4A 47 
D4A H13  H13 H  0 1 N N N -11.811 -16.982 18.244 6.320  0.911  0.578  H13  D4A 48 
D4A H14  H14 H  0 1 N N N -10.374 -18.814 17.445 7.846  -1.014 0.736  H14  D4A 49 
D4A H15  H15 H  0 1 N N N -11.012 -10.641 20.451 1.416  2.370  -1.948 H15  D4A 50 
D4A H16  H16 H  0 1 N N N -12.226 -11.606 19.545 -0.223 1.711  -2.138 H16  D4A 51 
D4A H17  H17 H  0 1 N N N -14.991 -15.862 18.378 -2.640 -1.351 -1.653 H17  D4A 52 
D4A H18  H18 H  0 1 N N N -10.985 -11.416 17.846 1.511  -1.366 -2.442 H18  D4A 53 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
D4A F32  C17 SING N N 1  
D4A C17  C7  DOUB Y N 2  
D4A C17  C6  SING Y N 3  
D4A C7   C5  SING Y N 4  
D4A C6   C4  DOUB Y N 5  
D4A C5   C16 DOUB Y N 6  
D4A C4   C16 SING Y N 7  
D4A C16  N28 SING N N 8  
D4A C9   C2  DOUB Y N 9  
D4A C9   C19 SING Y N 10 
D4A C2   C1  SING Y N 11 
D4A CL35 C19 SING N N 12 
D4A O31  C23 SING N N 13 
D4A C19  C18 DOUB Y N 14 
D4A C1   C8  DOUB Y N 15 
D4A N28  C21 SING N N 16 
D4A C18  C8  SING Y N 17 
D4A C18  S34 SING N N 18 
D4A S34  C22 SING N N 19 
D4A C23  C22 DOUB N N 20 
D4A C23  C25 SING N N 21 
D4A C21  N27 DOUB Y N 22 
D4A C21  C11 SING Y N 23 
D4A C22  C24 SING N N 24 
D4A N27  C20 SING Y N 25 
D4A C25  C26 SING N N 26 
D4A C11  C3  DOUB Y N 27 
D4A C20  C26 SING N N 28 
D4A C20  C10 DOUB Y N 29 
D4A C24  O29 DOUB N N 30 
D4A C24  O30 SING N N 31 
D4A C26  O30 SING N N 32 
D4A C26  C15 SING N N 33 
D4A C3   C10 SING Y N 34 
D4A C15  C14 DOUB Y N 35 
D4A C15  C12 SING Y N 36 
D4A C14  S33 SING Y N 37 
D4A C12  C13 DOUB Y N 38 
D4A S33  C13 SING Y N 39 
D4A C4   H1  SING N N 40 
D4A C14  H2  SING N N 41 
D4A C5   H3  SING N N 42 
D4A C6   H4  SING N N 43 
D4A C11  H5  SING N N 44 
D4A C7   H6  SING N N 45 
D4A C8   H7  SING N N 46 
D4A C9   H8  SING N N 47 
D4A C10  H9  SING N N 48 
D4A C12  H10 SING N N 49 
D4A C13  H11 SING N N 50 
D4A C3   H12 SING N N 51 
D4A C1   H13 SING N N 52 
D4A C2   H14 SING N N 53 
D4A C25  H15 SING N N 54 
D4A C25  H16 SING N N 55 
D4A N28  H17 SING N N 56 
D4A O31  H18 SING N N 57 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
D4A SMILES           ACDLabs              12.01 "c1c(ccc(c1)F)Nc5cccc(C3(c2cscc2)CC(=C(C(=O)O3)Sc4ccccc4Cl)O)n5"                                                                                                                  
D4A InChI            InChI                1.03  "InChI=1S/C26H18ClFN2O3S2/c27-19-4-1-2-5-21(19)35-24-20(31)14-26(33-25(24)32,16-12-13-34-15-16)22-6-3-7-23(30-22)29-18-10-8-17(28)9-11-18/h1-13,15,31H,14H2,(H,29,30)/t26-/m1/s1" 
D4A InChIKey         InChI                1.03  FGGVZLMILAHJIQ-AREMUKBSSA-N                                                                                                                                                       
D4A SMILES_CANONICAL CACTVS               3.385 "OC1=C(Sc2ccccc2Cl)C(=O)O[C@](C1)(c3cscc3)c4cccc(Nc5ccc(F)cc5)n4"                                                                                                                 
D4A SMILES           CACTVS               3.385 "OC1=C(Sc2ccccc2Cl)C(=O)O[C](C1)(c3cscc3)c4cccc(Nc5ccc(F)cc5)n4"                                                                                                                  
D4A SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc(c(c1)SC2=C(C[C@@](OC2=O)(c3ccsc3)c4cccc(n4)Nc5ccc(cc5)F)O)Cl"                                                                                                              
D4A SMILES           "OpenEye OEToolkits" 2.0.6 "c1ccc(c(c1)SC2=C(CC(OC2=O)(c3ccsc3)c4cccc(n4)Nc5ccc(cc5)F)O)Cl"                                                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
D4A "SYSTEMATIC NAME" ACDLabs              12.01 "(6R)-3-[(2-chlorophenyl)sulfanyl]-6-{6-[(4-fluorophenyl)amino]pyridin-2-yl}-4-hydroxy-6-(thiophen-3-yl)-5,6-dihydro-2H-pyran-2-one" 
D4A "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{R})-5-(2-chlorophenyl)sulfanyl-2-[6-[(4-fluorophenyl)amino]pyridin-2-yl]-4-oxidanyl-2-thiophen-3-yl-3~{H}-pyran-6-one"          
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
D4A "Create component" 2017-10-17 RCSB 
D4A "Initial release"  2018-10-24 RCSB 
# 
