data_C5A
#

_chem_comp.id                                   C5A
_chem_comp.name                                 "(1S,3S)-1-aminocyclopentane-1,3-dicarboxylic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C7 H11 N O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "1S,3S-ACPD"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2007-07-16
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  ?
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       173.167
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    C5A
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       "OpenEye/OEToolkits V1.4.2"
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       ?
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
C5A  N     N     N  0  1  N  N  N  19.229  -5.696  50.396   5.496  -1.257  -0.070  N     C5A   1  
C5A  CA    CA    C  0  1  N  N  S  20.348  -4.707  50.392   4.217  -0.931   0.542  CA    C5A   2  
C5A  C     C     C  0  1  N  N  N  20.324  -3.776  49.173   3.759  -2.201   1.206  C     C5A   3  
C5A  O     O     O  0  1  N  N  N  19.708  -4.125  48.151   3.491  -2.316   2.393  O     C5A   4  
C5A  OXT   OXT   O  0  1  N  N  N  20.910  -2.680  49.221   3.686  -3.212   0.307  OXT   C5A   5  
C5A  CB1   CB1   C  0  1  N  N  N  21.622  -5.530  50.471   3.187  -0.434  -0.475  CB1   C5A   6  
C5A  CB2   CB2   C  0  1  N  N  N  20.240  -3.922  51.690   4.308   0.219   1.540  CB2   C5A   7  
C5A  CG2   CG2   C  0  1  N  N  N  21.192  -4.680  52.695   2.864   0.693   1.687  CG2   C5A   8  
C5A  CD    CD    C  0  1  N  N  S  21.635  -5.941  51.939   2.192   0.406   0.340  CD    C5A   9  
C5A  CE    CE    C  0  1  N  N  N  23.015  -6.413  52.395   0.904  -0.336   0.526  CE    C5A  10  
C5A  OZ1   OZ1   O  0  1  N  N  N  23.099  -7.314  53.257   0.796  -1.552   0.580  OZ1   C5A  11  
C5A  OZ2   OZ2   O  0  1  N  N  N  24.044  -5.906  51.904  -0.136   0.528   0.626  OZ2   C5A  12  
C5A  HN1   1HN   H  0  1  N  N  N  18.982  -5.917  51.340   5.896  -0.603  -0.710  HN1   C5A  13  
C5A  HN2   2HN   H  0  1  N  N  N  18.437  -5.305  49.927   5.832  -2.196   0.006  HN2   C5A  14  
C5A  HOXT  HOXT  H  0  0  N  N  N  20.795  -2.222  48.397   3.391  -4.051   0.721  HOXT  C5A  15  
C5A  HB11  1HB1  H  0  0  N  N  N  21.596  -6.399  49.797   2.705  -1.253  -1.022  HB11  C5A  16  
C5A  HB12  2HB1  H  0  0  N  N  N  22.523  -4.983  50.156   3.669   0.220  -1.214  HB12  C5A  17  
C5A  HB21  1HB2  H  0  0  N  N  N  20.561  -2.879  51.550   4.919   1.038   1.139  HB21  C5A  18  
C5A  HB22  2HB2  H  0  0  N  N  N  19.205  -3.870  52.058   4.731  -0.076   2.507  HB22  C5A  19  
C5A  HG21  1HG2  H  0  0  N  N  N  22.057  -4.057  52.966   2.370   0.156   2.507  HG21  C5A  20  
C5A  HG22  2HG2  H  0  0  N  N  N  20.686  -4.922  53.641   2.828   1.760   1.934  HG22  C5A  21  
C5A  HD    HD    H  0  1  N  N  N  20.971  -6.798  52.128   1.952   1.335  -0.189  HD    C5A  22  
C5A  HOZ2  HOZ2  H  0  0  N  N  N  24.812  -6.312  52.288  -0.990   0.061   0.746  HOZ2  C5A  23  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
C5A  N    CA    SING  N  N   1  
C5A  CA   C     SING  N  N   2  
C5A  CA   CB1   SING  N  N   3  
C5A  CA   CB2   SING  N  N   4  
C5A  C    O     DOUB  N  N   5  
C5A  C    OXT   SING  N  N   6  
C5A  CB1  CD    SING  N  N   7  
C5A  CB2  CG2   SING  N  N   8  
C5A  CG2  CD    SING  N  N   9  
C5A  CD   CE    SING  N  N  10  
C5A  CE   OZ1   DOUB  N  N  11  
C5A  CE   OZ2   SING  N  N  12  
C5A  N    HN1   SING  N  N  13  
C5A  N    HN2   SING  N  N  14  
C5A  OXT  HOXT  SING  N  N  15  
C5A  CB1  HB11  SING  N  N  16  
C5A  CB1  HB12  SING  N  N  17  
C5A  CB2  HB21  SING  N  N  18  
C5A  CB2  HB22  SING  N  N  19  
C5A  CG2  HG21  SING  N  N  20  
C5A  CG2  HG22  SING  N  N  21  
C5A  CD   HD    SING  N  N  22  
C5A  OZ2  HOZ2  SING  N  N  23  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
C5A  SMILES            ACDLabs               10.04  "O=C(O)C1(N)CC(C(=O)O)CC1"  
C5A  SMILES_CANONICAL  CACTVS                3.341  "N[C@]1(CC[C@@H](C1)C(O)=O)C(O)=O"  
C5A  SMILES            CACTVS                3.341  "N[C]1(CC[CH](C1)C(O)=O)C(O)=O"  
C5A  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C1C[C@](C[C@H]1C(=O)O)(C(=O)O)N"  
C5A  SMILES            "OpenEye OEToolkits"  1.5.0  "C1CC(CC1C(=O)O)(C(=O)O)N"  
C5A  InChI             InChI                 1.03   "InChI=1S/C7H11NO4/c8-7(6(11)12)2-1-4(3-7)5(9)10/h4H,1-3,8H2,(H,9,10)(H,11,12)/t4-,7-/m0/s1"  
C5A  InChIKey          InChI                 1.03   YFYNOWXBIBKGHB-FFWSUHOLSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
C5A  "SYSTEMATIC NAME"  ACDLabs               10.04  "(1S,3S)-1-aminocyclopentane-1,3-dicarboxylic acid"  
C5A  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(1S,3S)-1-aminocyclopentane-1,3-dicarboxylic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
C5A  "Create component"   2007-07-16  RCSB  
C5A  "Modify descriptor"  2011-06-04  RCSB  
C5A  "Modify synonyms"    2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     C5A
_pdbx_chem_comp_synonyms.name        "1S,3S-ACPD"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
