data_C3A
# 
_chem_comp.id                                    C3A 
_chem_comp.name                                  "ALLYL {(1S)-1-[(5-{4-[(2,3-DIHYDRO-1H-INDEN-2-YLAMINO)CARBONYL]BENZYL}-1,2,4-OXADIAZOL-3-YL)CARBONYL]-3-PYRROLIDIN-3-YLPROPYL}CARBAMATE" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C31 H35 N5 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2006-01-24 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        557.640 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     C3A 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2FS8 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
C3A C2   C2   C 0 1 N N N N N N 0.972   18.447 72.153 9.767   0.825  2.442  C2   C3A 1  
C3A C5   C5   C 0 1 N N N N N N -0.123  21.190 70.158 6.579   -0.049 0.809  C5   C3A 2  
C3A C1   C1   C 0 1 N N N N N N 2.083   18.026 71.357 10.935  0.251  2.592  C1   C3A 3  
C3A C3   C3   C 0 1 N N N N N N 0.126   19.873 72.378 8.902   0.476  1.258  C3   C3A 4  
C3A O4   O4   O 0 1 N N N N N N -0.785  20.723 71.337 7.534   0.273  1.701  O4   C3A 5  
C3A O6   O6   O 0 1 N N N N N N 1.082   20.591 69.962 6.861   -0.172 -0.366 O6   C3A 6  
C3A C8   C8   C 0 1 N N R N N N -1.435  22.438 68.145 4.270   -0.589 0.249  C8   C3A 7  
C3A C9   C9   C 0 1 N N N N N N -0.980  23.901 67.876 3.718   0.686  -0.392 C9   C3A 8  
C3A N7   N7   N 0 1 N N N N N N -0.411  21.845 69.008 5.309   -0.237 1.220  N7   C3A 9  
C3A C10  C10  C 0 1 N N N N N N 0.455   23.893 67.198 4.821   1.365  -1.207 C10  C3A 10 
C3A C11  C11  C 0 1 N N R N N N 1.446   25.001 67.603 4.270   2.640  -1.848 C11  C3A 11 
C3A C12  C12  C 0 1 N N N N N N 1.048   25.987 68.715 5.343   3.316  -2.732 C12  C3A 12 
C3A C13  C13  C 0 1 N N N N N N 1.736   27.284 68.271 5.178   4.826  -2.480 C13  C3A 13 
C3A N14  N14  N 0 1 N N N N N N 2.412   27.014 67.004 4.055   4.988  -1.532 N14  C3A 14 
C3A C15  C15  C 0 1 N N N N N N 1.780   25.867 66.422 3.976   3.713  -0.770 C15  C3A 15 
C3A C16  C16  C 0 1 N N N N N N -2.862  22.100 68.419 3.155   -1.321 0.951  C16  C3A 16 
C3A O17  O17  O 0 1 N N N N N N -3.613  23.190 68.720 3.026   -1.222 2.148  O17  C3A 17 
C3A C18  C18  C 0 1 Y N N N N N -3.396  21.144 69.319 2.218   -2.161 0.173  C18  C3A 18 
C3A N19  N19  N 0 1 Y N N N N N -4.499  21.311 69.996 2.240   -2.357 -1.120 N19  C3A 19 
C3A O20  O20  O 0 1 Y N N N N N -4.776  20.228 70.714 1.336   -3.097 -1.445 O20  C3A 20 
C3A C21  C21  C 0 1 Y N N N N N -3.750  19.332 70.440 0.629   -3.457 -0.368 C21  C3A 21 
C3A C22  C22  C 0 1 N N N N N N -3.651  18.080 70.963 -0.572  -4.367 -0.350 C22  C3A 22 
C3A C23  C23  C 0 1 Y N N N N N -4.961  17.378 70.931 -1.825  -3.548 -0.528 C23  C3A 23 
C3A C24  C24  C 0 1 Y N N N N N -5.920  17.551 72.086 -2.483  -3.046 0.580  C24  C3A 24 
C3A C25  C25  C 0 1 Y N N N N N -7.203  16.857 72.081 -3.627  -2.292 0.424  C25  C3A 25 
C3A C26  C26  C 0 1 Y N N N N N -7.508  16.009 70.927 -4.127  -2.045 -0.856 C26  C3A 26 
C3A C27  C27  C 0 1 Y N N N N N -6.553  15.885 69.850 -3.462  -2.559 -1.969 C27  C3A 27 
C3A C28  C28  C 0 1 Y N N N N N -5.330  16.535 69.833 -2.315  -3.307 -1.799 C28  C3A 28 
C3A C29  C29  C 0 1 N N N N N N -8.721  15.239 70.822 -5.356  -1.242 -1.030 C29  C3A 29 
C3A O30  O30  O 0 1 N N N N N N -9.709  15.557 71.284 -5.789  -1.028 -2.146 O30  C3A 30 
C3A N31  N31  N 0 1 N N N N N N -8.504  14.115 70.175 -5.997  -0.747 0.047  N31  C3A 31 
C3A C32  C32  C 0 1 N N N N N N -9.205  12.956 69.795 -7.215  0.049  -0.126 C32  C3A 32 
C3A C33  C33  C 0 1 N N N N N N -10.169 12.209 70.627 -8.097  -0.016 1.139  C33  C3A 33 
C3A C34  C34  C 0 1 Y N N N N N -11.044 11.532 69.694 -8.725  1.357  1.255  C34  C3A 34 
C3A C35  C35  C 0 1 Y N N N N N -12.093 10.595 70.037 -9.821  1.783  1.985  C35  C3A 35 
C3A C36  C36  C 0 1 Y N N N N N -12.856 10.024 68.954 -10.217 3.105  1.936  C36  C3A 36 
C3A C37  C37  C 0 1 Y N N N N N -12.578 10.372 67.557 -9.517  4.007  1.156  C37  C3A 37 
C3A C38  C38  C 0 1 Y N N N N N -11.531 11.319 67.242 -8.423  3.583  0.427  C38  C3A 38 
C3A C39  C39  C 0 1 Y N N N N N -10.750 11.880 68.320 -8.025  2.258  0.475  C39  C3A 39 
C3A C40  C40  C 0 1 N N N N N N -9.631  12.873 68.239 -6.879  1.553  -0.219 C40  C3A 40 
C3A N41  N41  N 0 1 Y N N N N N -2.898  19.894 69.582 1.180   -2.876 0.667  N41  C3A 41 
C3A H2   H2   H 0 1 N N N N N N 0.582   17.644 72.761 9.424   1.548  3.167  H2   C3A 42 
C3A H11A 1H1  H 0 0 N N N N N N 2.503   17.031 71.344 11.555  0.501  3.441  H11A C3A 43 
C3A H12  2H1  H 0 1 N N N N N N 2.435   18.862 70.771 11.276  -0.476 1.870  H12  C3A 44 
C3A H31A 1H3  H 0 0 N N N N N N 0.984   20.559 72.435 8.933   1.289  0.534  H31A C3A 45 
C3A H32A 2H3  H 0 0 N N N N N N -0.583  19.619 73.180 9.273   -0.438 0.795  H32A C3A 46 
C3A H8   H8   H 0 1 N N N N N N -1.492  21.935 67.168 4.695   -1.229 -0.523 H8   C3A 47 
C3A H91  1H9  H 0 1 N N N N N N -0.933  24.451 68.827 2.885   0.433  -1.047 H91  C3A 48 
C3A H92  2H9  H 0 1 N N N N N N -1.700  24.391 67.204 3.373   1.365  0.388  H92  C3A 49 
C3A HN7  HN7  H 0 1 N N N N N N 0.462   21.986 68.542 5.084   -0.140 2.158  HN7  C3A 50 
C3A H101 1H10 H 0 0 N N N N N N 0.263   24.063 66.128 5.654   1.619  -0.552 H101 C3A 51 
C3A H102 2H10 H 0 0 N N N N N N 0.925   22.934 67.461 5.166   0.686  -1.987 H102 C3A 52 
C3A H11  H11  H 0 1 N N N N N N 2.273   24.394 68.000 3.373   2.422  -2.429 H11  C3A 53 
C3A H121 1H12 H 0 0 N N N N N N 1.350   25.656 69.720 6.339   2.989  -2.434 H121 C3A 54 
C3A H122 2H12 H 0 0 N N N N N N -0.043  26.106 68.786 5.167   3.087  -3.783 H122 C3A 55 
C3A H131 1H13 H 0 0 N N N N N N 2.459   27.616 69.030 6.092   5.232  -2.045 H131 C3A 56 
C3A H132 2H13 H 0 0 N N N N N N 0.990   28.082 68.139 4.951   5.337  -3.416 H132 C3A 57 
C3A H14  H14  H 0 1 N N N N N N 2.329   27.802 66.393 4.330   5.703  -0.875 H14  C3A 58 
C3A H151 1H15 H 0 0 N N N N N N 0.893   26.130 65.827 2.981   3.579  -0.347 H151 C3A 59 
C3A H152 2H15 H 0 0 N N N N N N 2.454   25.350 65.723 4.735   3.685  0.013  H152 C3A 60 
C3A H221 1H22 H 0 0 N N N N N N -3.326  18.164 72.010 -0.492  -5.090 -1.161 H221 C3A 61 
C3A H222 2H22 H 0 0 N N N N N N -2.924  17.504 70.372 -0.615  -4.893 0.604  H222 C3A 62 
C3A H24  H24  H 0 1 N N N N N N -5.655  18.189 72.916 -2.095  -3.238 1.570  H24  C3A 63 
C3A H25  H25  H 0 1 N N N N N N -7.902  16.965 72.898 -4.138  -1.897 1.290  H25  C3A 64 
C3A H27  H27  H 0 1 N N N N N N -6.806  15.251 69.013 -3.843  -2.371 -2.962 H27  C3A 65 
C3A H28  H28  H 0 1 N N N N N N -4.658  16.407 68.997 -1.799  -3.705 -2.660 H28  C3A 66 
C3A H31  H31  H 0 1 N N N N N N -7.557  14.071 69.858 -5.651  -0.917 0.937  H31  C3A 67 
C3A H32  H32  H 0 1 N N N N N N -8.307  12.384 70.073 -7.770  -0.282 -1.004 H32  C3A 68 
C3A H331 1H33 H 0 0 N N N N N N -10.730 12.877 71.297 -8.869  -0.776 1.022  H331 C3A 69 
C3A H332 2H33 H 0 0 N N N N N N -9.650  11.484 71.271 -7.486  -0.228 2.016  H332 C3A 70 
C3A H35  H35  H 0 1 N N N N N N -12.297 10.333 71.065 -10.369 1.079  2.594  H35  C3A 71 
C3A H36  H36  H 0 1 N N N N N N -13.649 9.325  69.177 -11.073 3.435  2.507  H36  C3A 72 
C3A H37  H37  H 0 1 N N N N N N -13.155 9.921  66.763 -9.826  5.041  1.116  H37  C3A 73 
C3A H38  H38  H 0 1 N N N N N N -11.336 11.602 66.218 -7.877  4.288  -0.182 H38  C3A 74 
C3A H401 1H40 H 0 0 N N N N N N -8.816  12.589 67.557 -5.940  1.763  0.293  H401 C3A 75 
C3A H402 2H40 H 0 0 N N N N N N -9.955  13.844 67.836 -6.820  1.863  -1.262 H402 C3A 76 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
C3A C2  C1   DOUB N N 1  
C3A C2  C3   SING N N 2  
C3A C2  H2   SING N N 3  
C3A C5  O4   SING N N 4  
C3A C5  O6   DOUB N N 5  
C3A C5  N7   SING N N 6  
C3A C1  H11A SING N N 7  
C3A C1  H12  SING N N 8  
C3A C3  O4   SING N N 9  
C3A C3  H31A SING N N 10 
C3A C3  H32A SING N N 11 
C3A C8  C9   SING N N 12 
C3A C8  N7   SING N N 13 
C3A C8  C16  SING N N 14 
C3A C8  H8   SING N N 15 
C3A C9  C10  SING N N 16 
C3A C9  H91  SING N N 17 
C3A C9  H92  SING N N 18 
C3A N7  HN7  SING N N 19 
C3A C10 C11  SING N N 20 
C3A C10 H101 SING N N 21 
C3A C10 H102 SING N N 22 
C3A C11 C12  SING N N 23 
C3A C11 C15  SING N N 24 
C3A C11 H11  SING N N 25 
C3A C12 C13  SING N N 26 
C3A C12 H121 SING N N 27 
C3A C12 H122 SING N N 28 
C3A C13 N14  SING N N 29 
C3A C13 H131 SING N N 30 
C3A C13 H132 SING N N 31 
C3A N14 C15  SING N N 32 
C3A N14 H14  SING N N 33 
C3A C15 H151 SING N N 34 
C3A C15 H152 SING N N 35 
C3A C16 O17  DOUB N N 36 
C3A C16 C18  SING N N 37 
C3A C18 N19  DOUB Y N 38 
C3A C18 N41  SING Y N 39 
C3A N19 O20  SING Y N 40 
C3A O20 C21  SING Y N 41 
C3A C21 C22  SING N N 42 
C3A C21 N41  DOUB Y N 43 
C3A C22 C23  SING N N 44 
C3A C22 H221 SING N N 45 
C3A C22 H222 SING N N 46 
C3A C23 C24  SING Y N 47 
C3A C23 C28  DOUB Y N 48 
C3A C24 C25  DOUB Y N 49 
C3A C24 H24  SING N N 50 
C3A C25 C26  SING Y N 51 
C3A C25 H25  SING N N 52 
C3A C26 C27  DOUB Y N 53 
C3A C26 C29  SING N N 54 
C3A C27 C28  SING Y N 55 
C3A C27 H27  SING N N 56 
C3A C28 H28  SING N N 57 
C3A C29 O30  DOUB N N 58 
C3A C29 N31  SING N N 59 
C3A N31 C32  SING N N 60 
C3A N31 H31  SING N N 61 
C3A C32 C33  SING N N 62 
C3A C32 C40  SING N N 63 
C3A C32 H32  SING N N 64 
C3A C33 C34  SING N N 65 
C3A C33 H331 SING N N 66 
C3A C33 H332 SING N N 67 
C3A C34 C35  DOUB Y N 68 
C3A C34 C39  SING Y N 69 
C3A C35 C36  SING Y N 70 
C3A C35 H35  SING N N 71 
C3A C36 C37  DOUB Y N 72 
C3A C36 H36  SING N N 73 
C3A C37 C38  SING Y N 74 
C3A C37 H37  SING N N 75 
C3A C38 C39  DOUB Y N 76 
C3A C38 H38  SING N N 77 
C3A C39 C40  SING N N 78 
C3A C40 H401 SING N N 79 
C3A C40 H402 SING N N 80 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
C3A SMILES           ACDLabs              10.04 "O=C(c1nc(on1)Cc4ccc(C(=O)NC3Cc2ccccc2C3)cc4)C(NC(=O)OC\C=C)CCC5CCNC5"                                                                                                                                                        
C3A SMILES_CANONICAL CACTVS               3.341 "C=CCOC(=O)N[C@H](CC[C@@H]1CCNC1)C(=O)c2noc(Cc3ccc(cc3)C(=O)NC4Cc5ccccc5C4)n2"                                                                                                                                                
C3A SMILES           CACTVS               3.341 "C=CCOC(=O)N[CH](CC[CH]1CCNC1)C(=O)c2noc(Cc3ccc(cc3)C(=O)NC4Cc5ccccc5C4)n2"                                                                                                                                                   
C3A SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C=CCOC(=O)N[C@H](CC[C@@H]1CCNC1)C(=O)c2nc(on2)Cc3ccc(cc3)C(=O)NC4Cc5ccccc5C4"                                                                                                                                                
C3A SMILES           "OpenEye OEToolkits" 1.5.0 "C=CCOC(=O)NC(CCC1CCNC1)C(=O)c2nc(on2)Cc3ccc(cc3)C(=O)NC4Cc5ccccc5C4"                                                                                                                                                         
C3A InChI            InChI                1.03  "InChI=1S/C31H35N5O5/c1-2-15-40-31(39)34-26(12-9-21-13-14-32-19-21)28(37)29-35-27(41-36-29)16-20-7-10-22(11-8-20)30(38)33-25-17-23-5-3-4-6-24(23)18-25/h2-8,10-11,21,25-26,32H,1,9,12-19H2,(H,33,38)(H,34,39)/t21-,26-/m1/s1" 
C3A InChIKey         InChI                1.03  YCRRSNQAJBEKFO-QFQXNSOFSA-N                                                                                                                                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
C3A "SYSTEMATIC NAME" ACDLabs              10.04 "prop-2-en-1-yl {(1R)-1-({5-[4-(2,3-dihydro-1H-inden-2-ylcarbamoyl)benzyl]-1,2,4-oxadiazol-3-yl}carbonyl)-3-[(3R)-pyrrolidin-3-yl]propyl}carbamate"        
C3A "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "prop-2-enyl N-[(2R)-1-[5-[[4-(2,3-dihydro-1H-inden-2-ylcarbamoyl)phenyl]methyl]-1,2,4-oxadiazol-3-yl]-1-oxo-4-[(3R)-pyrrolidin-3-yl]butan-2-yl]carbamate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
C3A "Create component"  2006-01-24 RCSB 
C3A "Modify descriptor" 2011-06-04 RCSB 
C3A "Modify PCM"        2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            C3A 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C16 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
