data_9PA
# 
_chem_comp.id                                    9PA 
_chem_comp.name                                  "5-[(2S)-2-{[(5-aminopentanoyl)amino]methyl}-4-methylpentyl]-1,3-benzodioxole-4-carboxylic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H30 N2 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-12-23 
_chem_comp.pdbx_modified_date                    2014-01-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        378.463 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9PA 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4CJL 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9PA O1   O1   O 0 1 N N N -12.554 46.611 -13.999 4.475  -2.037 0.567  O1   9PA 1  
9PA C2   C2   C 0 1 N N N -13.292 45.769 -14.581 3.502  -1.163 0.890  C2   9PA 2  
9PA O3   O3   O 0 1 N N N -14.407 45.374 -14.147 2.834  -1.339 1.889  O3   9PA 3  
9PA C4   C4   C 0 1 Y N N -12.835 45.229 -15.896 3.249  0.009  0.031  C4   9PA 4  
9PA C5   C5   C 0 1 Y N N -13.727 45.234 -16.945 3.843  1.241  0.329  C5   9PA 5  
9PA O6   O6   O 0 1 N N N -15.018 45.684 -16.900 4.680  1.621  1.334  O6   9PA 6  
9PA C7   C7   C 0 1 N N N -15.503 45.116 -18.122 4.622  3.060  1.360  C7   9PA 7  
9PA O8   O8   O 0 1 N N N -14.458 44.856 -19.059 4.283  3.413  0.006  O8   9PA 8  
9PA C9   C9   C 0 1 Y N N -13.412 44.760 -18.181 3.597  2.341  -0.489 C9   9PA 9  
9PA C10  C10  C 0 1 Y N N -12.167 44.251 -18.451 2.768  2.211  -1.590 C10  9PA 10 
9PA C11  C11  C 0 1 Y N N -11.255 44.239 -17.417 2.179  0.992  -1.884 C11  9PA 11 
9PA C12  C12  C 0 1 Y N N -11.569 44.724 -16.152 2.419  -0.107 -1.088 C12  9PA 12 
9PA C13  C13  C 0 1 N N N -10.511 44.640 -15.093 1.774  -1.429 -1.415 C13  9PA 13 
9PA C14  C14  C 0 1 N N S -9.167  45.233 -15.449 0.473  -1.572 -0.624 C14  9PA 14 
9PA C15  C15  C 0 1 N N N -9.279  46.731 -15.655 -0.530 -0.519 -1.097 C15  9PA 15 
9PA N16  N16  N 0 1 N N N -9.908  47.399 -14.536 -1.687 -0.508 -0.198 N16  9PA 16 
9PA C17  C17  C 0 1 N N N -9.203  48.329 -13.803 -2.770 0.235  -0.503 C17  9PA 17 
9PA O18  O18  O 0 1 N N N -8.036  48.637 -13.999 -2.787 0.894  -1.521 O18  9PA 18 
9PA C19  C19  C 0 1 N N N -10.024 48.964 -12.721 -3.960 0.247  0.422  C19  9PA 19 
9PA C20  C20  C 0 1 N N N -9.461  48.572 -11.376 -5.043 1.162  -0.153 C20  9PA 20 
9PA C21  C21  C 0 1 N N N -10.470 48.914 -10.304 -6.252 1.173  0.786  C21  9PA 21 
9PA C22  C22  C 0 1 N N N -9.763  49.078 -8.979  -7.335 2.089  0.212  C22  9PA 22 
9PA N23  N23  N 0 1 N N N -10.770 49.401 -7.934  -8.495 2.100  1.113  N23  9PA 23 
9PA C24  C24  C 0 1 N N N -8.174  44.964 -14.329 -0.110 -2.969 -0.849 C24  9PA 24 
9PA C25  C25  C 0 1 N N N -7.935  43.490 -14.015 -1.311 -3.176 0.077  C25  9PA 25 
9PA C26  C26  C 0 1 N N N -7.532  42.705 -15.251 -1.931 -4.549 -0.191 C26  9PA 26 
9PA C27  C27  C 0 1 N N N -6.847  43.385 -12.957 -0.851 -3.099 1.534  C27  9PA 27 
9PA HO1  HO1  H 0 1 N N N -12.970 46.894 -13.193 4.603  -2.790 1.160  HO1  9PA 28 
9PA H7   H7   H 0 1 N N N -16.014 44.169 -17.892 3.848  3.399  2.049  H7   9PA 29 
9PA H7A  H7A  H 0 1 N N N -16.218 45.817 -18.577 5.589  3.478  1.637  H7A  9PA 30 
9PA H10  H10  H 0 1 N N N -11.912 43.876 -19.431 2.578  3.065  -2.223 H10  9PA 31 
9PA H11  H11  H 0 1 N N N -10.267 43.841 -17.595 1.534  0.901  -2.745 H11  9PA 32 
9PA H13  H13  H 0 1 N N N -10.885 45.165 -14.202 1.557  -1.473 -2.483 H13  9PA 33 
9PA H13A H13A H 0 0 N N N -10.357 43.577 -14.855 2.453  -2.240 -1.149 H13A 9PA 34 
9PA H14  H14  H 0 1 N N N -8.800  44.768 -16.375 0.676  -1.430 0.438  H14  9PA 35 
9PA H15  H15  H 0 1 N N N -8.269  47.145 -15.790 -0.056 0.463  -1.091 H15  9PA 36 
9PA H15A H15A H 0 0 N N N -9.877  46.919 -16.559 -0.859 -0.758 -2.109 H15A 9PA 37 
9PA HN16 HN16 H 0 0 N N N -10.855 47.186 -14.294 -1.674 -1.035 0.616  HN16 9PA 38 
9PA H19  H19  H 0 1 N N N -9.992  50.058 -12.829 -4.354 -0.765 0.520  H19  9PA 39 
9PA H19A H19A H 0 0 N N N -11.065 48.619 -12.799 -3.655 0.614  1.402  H19A 9PA 40 
9PA H20  H20  H 0 1 N N N -9.259  47.491 -11.361 -4.650 2.173  -0.251 H20  9PA 41 
9PA H20A H20A H 0 0 N N N -8.526  49.122 -11.192 -5.348 0.794  -1.132 H20A 9PA 42 
9PA H21  H21  H 0 1 N N N -10.979 49.853 -10.566 -6.645 0.162  0.884  H21  9PA 43 
9PA H21A H21A H 0 0 N N N -11.211 48.105 -10.226 -5.947 1.541  1.766  H21A 9PA 44 
9PA H22  H22  H 0 1 N N N -9.246  48.143 -8.718  -6.941 3.100  0.114  H22  9PA 45 
9PA H22A H22A H 0 0 N N N -9.029  49.895 -9.050  -7.639 1.721  -0.768 H22A 9PA 46 
9PA HN23 HN23 H 0 0 N N N -10.312 49.512 -7.052  -8.226 2.376  2.046  HN23 9PA 47 
9PA HN2A HN2A H 0 0 N N N -11.239 50.251 -8.175  -9.225 2.698  0.756  HN2A 9PA 48 
9PA H24  H24  H 0 1 N N N -7.211  45.412 -14.613 -0.430 -3.067 -1.886 H24  9PA 49 
9PA H24A H24A H 0 0 N N N -8.550  45.450 -13.417 0.650  -3.719 -0.631 H24A 9PA 50 
9PA H25  H25  H 0 1 N N N -8.864  43.061 -13.611 -2.052 -2.399 -0.112 H25  9PA 51 
9PA H26  H26  H 0 1 N N N -7.370  41.651 -14.980 -1.219 -5.328 0.082  H26  9PA 52 
9PA H26A H26A H 0 0 N N N -8.331  42.771 -16.004 -2.837 -4.660 0.405  H26A 9PA 53 
9PA H26B H26B H 0 0 N N N -6.603  43.124 -15.664 -2.178 -4.636 -1.249 H26B 9PA 54 
9PA H27  H27  H 0 1 N N N -6.665  42.326 -12.721 -1.686 -3.338 2.192  H27  9PA 55 
9PA H27A H27A H 0 0 N N N -5.921  43.840 -13.337 -0.043 -3.812 1.698  H27A 9PA 56 
9PA H27B H27B H 0 0 N N N -7.168  43.913 -12.047 -0.495 -2.091 1.750  H27B 9PA 57 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9PA C2  O1   SING N N 1  
9PA O1  HO1  SING N N 2  
9PA C4  C2   SING N N 3  
9PA C2  O3   DOUB N N 4  
9PA C5  C4   DOUB Y N 5  
9PA C12 C4   SING Y N 6  
9PA C9  C5   SING Y N 7  
9PA C5  O6   SING N N 8  
9PA C7  O6   SING N N 9  
9PA O8  C7   SING N N 10 
9PA C7  H7   SING N N 11 
9PA C7  H7A  SING N N 12 
9PA O8  C9   SING N N 13 
9PA C10 C9   DOUB Y N 14 
9PA C10 C11  SING Y N 15 
9PA C10 H10  SING N N 16 
9PA C11 C12  DOUB Y N 17 
9PA C11 H11  SING N N 18 
9PA C12 C13  SING N N 19 
9PA C14 C13  SING N N 20 
9PA C13 H13  SING N N 21 
9PA C13 H13A SING N N 22 
9PA C15 C14  SING N N 23 
9PA C14 C24  SING N N 24 
9PA C14 H14  SING N N 25 
9PA C15 N16  SING N N 26 
9PA C15 H15  SING N N 27 
9PA C15 H15A SING N N 28 
9PA N16 C17  SING N N 29 
9PA N16 HN16 SING N N 30 
9PA O18 C17  DOUB N N 31 
9PA C17 C19  SING N N 32 
9PA C19 C20  SING N N 33 
9PA C19 H19  SING N N 34 
9PA C19 H19A SING N N 35 
9PA C20 C21  SING N N 36 
9PA C20 H20  SING N N 37 
9PA C20 H20A SING N N 38 
9PA C21 C22  SING N N 39 
9PA C21 H21  SING N N 40 
9PA C21 H21A SING N N 41 
9PA C22 N23  SING N N 42 
9PA C22 H22  SING N N 43 
9PA C22 H22A SING N N 44 
9PA N23 HN23 SING N N 45 
9PA N23 HN2A SING N N 46 
9PA C24 C25  SING N N 47 
9PA C24 H24  SING N N 48 
9PA C24 H24A SING N N 49 
9PA C26 C25  SING N N 50 
9PA C25 C27  SING N N 51 
9PA C25 H25  SING N N 52 
9PA C26 H26  SING N N 53 
9PA C26 H26A SING N N 54 
9PA C26 H26B SING N N 55 
9PA C27 H27  SING N N 56 
9PA C27 H27A SING N N 57 
9PA C27 H27B SING N N 58 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9PA SMILES           ACDLabs              12.01 "O=C(O)c1c(ccc2OCOc12)CC(CC(C)C)CNC(=O)CCCCN"                                                                                                                      
9PA InChI            InChI                1.03  "InChI=1S/C20H30N2O5/c1-13(2)9-14(11-22-17(23)5-3-4-8-21)10-15-6-7-16-19(27-12-26-16)18(15)20(24)25/h6-7,13-14H,3-5,8-12,21H2,1-2H3,(H,22,23)(H,24,25)/t14-/m0/s1" 
9PA InChIKey         InChI                1.03  PPUJEZUKUJTCNK-AWEZNQCLSA-N                                                                                                                                        
9PA SMILES_CANONICAL CACTVS               3.385 "CC(C)C[C@H](CNC(=O)CCCCN)Cc1ccc2OCOc2c1C(O)=O"                                                                                                                    
9PA SMILES           CACTVS               3.385 "CC(C)C[CH](CNC(=O)CCCCN)Cc1ccc2OCOc2c1C(O)=O"                                                                                                                     
9PA SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(C)C[C@@H](Cc1ccc2c(c1C(=O)O)OCO2)CNC(=O)CCCCN"                                                                                                                 
9PA SMILES           "OpenEye OEToolkits" 1.7.6 "CC(C)CC(Cc1ccc2c(c1C(=O)O)OCO2)CNC(=O)CCCCN"                                                                                                                      
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
9PA "SYSTEMATIC NAME" ACDLabs              12.01 "5-[(2S)-2-{[(5-aminopentanoyl)amino]methyl}-4-methylpentyl]-1,3-benzodioxole-4-carboxylic acid" 
9PA "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "5-[(2S)-2-[(5-azanylpentanoylamino)methyl]-4-methyl-pentyl]-1,3-benzodioxole-4-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9PA "Create component" 2013-12-23 EBI  
9PA "Initial release"  2014-01-08 RCSB 
# 
