data_8XA
# 
_chem_comp.id                                    8XA 
_chem_comp.name                                  "9-(5-O-phosphono-beta-D-xylofuranosyl)-9H-purin-6-amine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             ATOMN 
_chem_comp.formula                               "C10 H14 N5 O7 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-07-16 
_chem_comp.pdbx_modified_date                    2015-07-24 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        347.221 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     8XA 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2N4J 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
8XA P      P      P 0 1 N N N 78.203 81.482 -21.755 4.838  0.947  0.196  P      8XA 1  
8XA OP1    OP1    O 0 1 N N N 78.035 81.874 -23.170 4.742  1.571  -1.143 OP1    8XA 2  
8XA OP2    OP2    O 0 1 N N N 77.076 81.662 -20.819 5.184  2.077  1.290  OP2    8XA 3  
8XA "O5'"  "O5'"  O 0 1 N N N 78.670 79.941 -21.703 3.434  0.253  0.567  "O5'"  8XA 4  
8XA "C5'"  "C5'"  C 0 1 N N N 79.401 79.446 -20.582 2.801  -0.718 -0.269 "C5'"  8XA 5  
8XA "C4'"  "C4'"  C 0 1 N N R 80.804 79.001 -20.975 1.490  -1.170 0.377  "C4'"  8XA 6  
8XA "O4'"  "O4'"  O 0 1 N N N 81.767 79.645 -20.154 0.519  -0.102 0.345  "O4'"  8XA 7  
8XA "C1'"  "C1'"  C 0 1 N N R 82.674 78.675 -19.637 -0.763 -0.748 0.497  "C1'"  8XA 8  
8XA N9     N9     N 0 1 Y N N 82.534 78.568 -18.174 -1.835 0.120  0.003  N9     8XA 9  
8XA C4     C4     C 0 1 Y N N 83.426 77.977 -17.308 -3.154 0.075  0.377  C4     8XA 10 
8XA N3     N3     N 0 1 Y N N 84.594 77.386 -17.630 -3.867 -0.671 1.214  N3     8XA 11 
8XA C2     C2     C 0 1 Y N N 85.214 76.920 -16.548 -5.159 -0.466 1.362  C2     8XA 12 
8XA N1     N1     N 0 1 Y N N 84.789 76.994 -15.286 -5.808 0.474  0.698  N1     8XA 13 
8XA C6     C6     C 0 1 Y N N 83.621 77.589 -14.996 -5.178 1.269  -0.162 C6     8XA 14 
8XA N6     N6     N 0 1 N N N 83.227 77.657 -13.727 -5.867 2.250  -0.852 N6     8XA 15 
8XA C5     C5     C 0 1 Y N N 82.884 78.117 -16.061 -3.798 1.089  -0.352 C5     8XA 16 
8XA N7     N7     N 0 1 Y N N 81.665 78.787 -16.123 -2.856 1.689  -1.120 N7     8XA 17 
8XA C8     C8     C 0 1 Y N N 81.523 79.025 -17.393 -1.702 1.125  -0.909 C8     8XA 18 
8XA "C2'"  "C2'"  C 0 1 N N R 82.388 77.336 -20.306 -0.666 -2.026 -0.365 "C2'"  8XA 19 
8XA "O2'"  "O2'"  O 0 1 N N N 83.299 77.082 -21.383 -1.348 -3.111 0.268  "O2'"  8XA 20 
8XA "C3'"  "C3'"  C 0 1 N N R 80.955 77.491 -20.819 0.850  -2.310 -0.446 "C3'"  8XA 21 
8XA "O3'"  "O3'"  O 0 1 N N N 79.990 76.962 -19.893 1.298  -2.261 -1.802 "O3'"  8XA 22 
8XA O1     O1     O 0 1 N Y N 79.496 82.242 -21.154 6.002  -0.165 0.188  O1     8XA 23 
8XA H1     H1     H 0 1 N N N 76.335 82.034 -21.283 6.018  2.538  1.130  H1     8XA 24 
8XA "H5'"  "H5'"  H 0 1 N N N 79.478 80.242 -19.827 2.593  -0.278 -1.244 "H5'"  8XA 25 
8XA "H5''" "H5''" H 0 0 N N N 78.861 78.588 -20.156 3.461  -1.577 -0.392 "H5''" 8XA 26 
8XA "H4'"  "H4'"  H 0 1 N N N 80.973 79.263 -22.030 1.665  -1.495 1.403  "H4'"  8XA 27 
8XA "H1'"  "H1'"  H 0 1 N N N 83.707 78.969 -19.877 -0.936 -1.006 1.542  "H1'"  8XA 28 
8XA H2     H2     H 0 1 N N N 86.163 76.430 -16.709 -5.709 -1.090 2.050  H2     8XA 29 
8XA H61    H61    H 0 1 N N N 83.911 77.223 -13.141 -6.820 2.365  -0.712 H61    8XA 30 
8XA H62    H62    H 0 1 N N N 83.121 78.615 -13.462 -5.397 2.825  -1.477 H62    8XA 31 
8XA H8     H8     H 0 1 N N N 80.667 79.546 -17.795 -0.777 1.410  -1.387 H8     8XA 32 
8XA "H2'"  "H2'"  H 0 1 N N N 82.428 76.531 -19.557 -1.075 -1.848 -1.360 "H2'"  8XA 33 
8XA "HO2'" "HO2'" H 0 0 N N N 84.180 76.990 -21.039 -1.319 -3.939 -0.231 "HO2'" 8XA 34 
8XA "H3'"  "H3'"  H 0 1 N N N 80.861 77.007 -21.802 1.082  -3.279 -0.002 "H3'"  8XA 35 
8XA H3     H3     H 0 1 N N N 80.107 76.022 -19.815 0.927  -2.954 -2.365 H3     8XA 36 
8XA H4     H4     H 0 1 N N N 79.886 82.786 -21.828 6.121  -0.616 1.035  H4     8XA 37 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
8XA OP1   P      DOUB N N 1  
8XA P     "O5'"  SING N N 2  
8XA P     OP2    SING N N 3  
8XA "O5'" "C5'"  SING N N 4  
8XA "O2'" "C2'"  SING N N 5  
8XA "C4'" "C3'"  SING N N 6  
8XA "C4'" "C5'"  SING N N 7  
8XA "C4'" "O4'"  SING N N 8  
8XA "C3'" "C2'"  SING N N 9  
8XA "C3'" "O3'"  SING N N 10 
8XA "C2'" "C1'"  SING N N 11 
8XA "O4'" "C1'"  SING N N 12 
8XA "C1'" N9     SING N N 13 
8XA N9    C8     SING Y N 14 
8XA N9    C4     SING Y N 15 
8XA N3    C4     DOUB Y N 16 
8XA N3    C2     SING Y N 17 
8XA C8    N7     DOUB Y N 18 
8XA C4    C5     SING Y N 19 
8XA C2    N1     DOUB Y N 20 
8XA N7    C5     SING Y N 21 
8XA C5    C6     DOUB Y N 22 
8XA N1    C6     SING Y N 23 
8XA C6    N6     SING N N 24 
8XA P     O1     SING N N 25 
8XA OP2   H1     SING N N 26 
8XA "C5'" "H5'"  SING N N 27 
8XA "C5'" "H5''" SING N N 28 
8XA "C4'" "H4'"  SING N N 29 
8XA "C1'" "H1'"  SING N N 30 
8XA C2    H2     SING N N 31 
8XA N6    H61    SING N N 32 
8XA N6    H62    SING N N 33 
8XA C8    H8     SING N N 34 
8XA "C2'" "H2'"  SING N N 35 
8XA "O2'" "HO2'" SING N N 36 
8XA "C3'" "H3'"  SING N N 37 
8XA "O3'" H3     SING N N 38 
8XA O1    H4     SING N N 39 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
8XA SMILES           ACDLabs              12.01 "P(OCC1C(C(C(O1)n2cnc3c2ncnc3N)O)O)(O)(O)=O"                                                                                                                     
8XA InChI            InChI                1.03  "InChI=1S/C10H14N5O7P/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(22-10)1-21-23(18,19)20/h2-4,6-7,10,16-17H,1H2,(H2,11,12,13)(H2,18,19,20)/t4-,6+,7-,10-/m1/s1" 
8XA InChIKey         InChI                1.03  UDMBCSSLTHHNCD-GAWUUDPSSA-N                                                                                                                                      
8XA SMILES_CANONICAL CACTVS               3.385 "Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@H](O)[C@H]3O"                                                                                                    
8XA SMILES           CACTVS               3.385 "Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O"                                                                                                         
8XA SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@H]([C@H](O3)COP(=O)(O)O)O)O)N"                                                                                                
8XA SMILES           "OpenEye OEToolkits" 1.7.6 "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)O)O)O)N"                                                                                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
8XA "SYSTEMATIC NAME" ACDLabs              12.01 "9-(5-O-phosphono-beta-D-xylofuranosyl)-9H-purin-6-amine"                                       
8XA "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2R,3R,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
8XA "Create component" 2015-07-16 RCSB 
8XA "Initial release"  2015-07-29 RCSB 
# 
