data_6RA
# 
_chem_comp.id                                    6RA 
_chem_comp.name                                  "N-[(1R)-1,2,3,4-tetrahydronaphthalen-1-yl]-1H-benzimidazol-2-amine" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C17 H17 N3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-05-31 
_chem_comp.pdbx_modified_date                    2023-05-12 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        263.337 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     6RA 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8SIA 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
6RA C7  C1  C 0 1 Y N N 116.896 96.276 145.963 -1.622 2.524  -0.447 C7  6RA 1  
6RA C6  C2  C 0 1 Y N N 116.648 95.520 144.835 -1.142 1.250  -0.227 C6  6RA 2  
6RA C9  C3  C 0 1 Y N N 119.171 95.577 145.926 -3.855 1.713  -0.191 C9  6RA 3  
6RA C13 C4  C 0 1 Y N N 115.000 93.544 142.333 0.932  -0.912 -0.420 C13 6RA 4  
6RA C20 C5  C 0 1 Y N N 113.893 94.071 140.524 2.629  0.079  0.602  C20 6RA 5  
6RA C8  C6  C 0 1 Y N N 118.151 96.302 146.508 -2.985 2.757  -0.425 C8  6RA 6  
6RA C18 C7  C 0 1 Y N N 112.087 94.319 139.007 4.846  0.878  1.023  C18 6RA 7  
6RA C16 C8  C 0 1 Y N N 111.684 93.421 141.207 4.394  -0.325 -1.003 C16 6RA 8  
6RA C19 C9  C 0 1 Y N N 113.436 94.459 139.277 3.529  0.752  1.414  C19 6RA 9  
6RA C1  C10 C 0 1 N N N 119.769 93.380 142.873 -3.708 -1.881 0.911  C1  6RA 10 
6RA C2  C11 C 0 1 N N N 118.374 92.790 142.875 -2.482 -2.252 0.068  C2  6RA 11 
6RA C3  C12 C 0 1 N N R 117.340 93.894 143.049 -1.423 -1.166 0.253  C3  6RA 12 
6RA C5  C13 C 0 1 Y N N 117.662 94.781 144.236 -2.016 0.198  0.016  C5  6RA 13 
6RA C10 C14 C 0 1 Y N N 118.945 94.812 144.787 -3.373 0.430  0.034  C10 6RA 14 
6RA C11 C15 C 0 1 N N N 120.065 93.981 144.215 -4.379 -0.665 0.276  C11 6RA 15 
6RA N12 N1  N 0 1 N N N 116.003 93.324 143.189 -0.331 -1.390 -0.697 N12 6RA 16 
6RA N14 N2  N 0 1 Y N N 113.758 93.226 142.632 1.978  -1.054 -1.196 N14 6RA 17 
6RA C15 C16 C 0 1 Y N N 113.037 93.555 141.490 3.058  -0.463 -0.621 C15 6RA 18 
6RA C17 C17 C 0 1 Y N N 111.223 93.808 139.959 5.276  0.340  -0.181 C17 6RA 19 
6RA N21 N3  N 0 1 Y N N 115.148 94.055 141.089 1.279  -0.214 0.701  N21 6RA 20 
6RA H27 H1  H 0 1 N N N 116.099 96.847 146.416 -0.936 3.337  -0.632 H27 6RA 21 
6RA H26 H2  H 0 1 N N N 115.654 95.502 144.413 -0.078 1.068  -0.245 H26 6RA 22 
6RA H29 H3  H 0 1 N N N 120.159 95.604 146.361 -4.919 1.896  -0.173 H29 6RA 23 
6RA H28 H4  H 0 1 N N N 118.343 96.890 147.393 -3.367 3.754  -0.589 H28 6RA 24 
6RA H35 H5  H 0 1 N N N 111.703 94.612 138.041 5.546  1.402  1.657  H35 6RA 25 
6RA H33 H6  H 0 1 N N N 111.004 93.023 141.946 4.735  -0.739 -1.941 H33 6RA 26 
6RA H36 H7  H 0 1 N N N 114.113 94.859 138.537 3.201  1.173  2.353  H36 6RA 27 
6RA H23 H8  H 0 1 N N N 120.501 92.588 142.658 -4.406 -2.717 0.931  H23 6RA 28 
6RA H22 H9  H 0 1 N N N 119.835 94.160 142.100 -3.395 -1.638 1.927  H22 6RA 29 
6RA H24 H10 H 0 1 N N N 118.196 92.272 141.921 -2.086 -3.211 0.399  H24 6RA 30 
6RA H25 H11 H 0 1 N N N 118.283 92.073 143.704 -2.764 -2.314 -0.983 H25 6RA 31 
6RA H4  H12 H 0 1 N N N 117.361 94.520 142.145 -1.032 -1.216 1.269  H4  6RA 32 
6RA H30 H13 H 0 1 N N N 120.280 93.163 144.918 -4.828 -0.957 -0.674 H30 6RA 33 
6RA H31 H14 H 0 1 N N N 120.953 94.622 144.116 -5.159 -0.296 0.942  H31 6RA 34 
6RA H32 H15 H 0 1 N N N 115.670 93.631 144.080 -0.496 -1.875 -1.521 H32 6RA 35 
6RA H34 H17 H 0 1 N N N 110.173 93.709 139.726 6.309  0.445  -0.477 H34 6RA 36 
6RA H37 H18 H 0 1 N N N 116.000 94.360 140.664 0.690  0.027  1.434  H37 6RA 37 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
6RA C18 C19 DOUB Y N 1  
6RA C18 C17 SING Y N 2  
6RA C19 C20 SING Y N 3  
6RA C17 C16 DOUB Y N 4  
6RA C20 N21 SING Y N 5  
6RA C20 C15 DOUB Y N 6  
6RA N21 C13 SING Y N 7  
6RA C16 C15 SING Y N 8  
6RA C15 N14 SING Y N 9  
6RA C13 N14 DOUB Y N 10 
6RA C13 N12 SING N N 11 
6RA C1  C2  SING N N 12 
6RA C1  C11 SING N N 13 
6RA C2  C3  SING N N 14 
6RA C3  N12 SING N N 15 
6RA C3  C5  SING N N 16 
6RA C11 C10 SING N N 17 
6RA C5  C10 DOUB Y N 18 
6RA C5  C6  SING Y N 19 
6RA C10 C9  SING Y N 20 
6RA C6  C7  DOUB Y N 21 
6RA C9  C8  DOUB Y N 22 
6RA C7  C8  SING Y N 23 
6RA C7  H27 SING N N 24 
6RA C6  H26 SING N N 25 
6RA C9  H29 SING N N 26 
6RA C8  H28 SING N N 27 
6RA C18 H35 SING N N 28 
6RA C16 H33 SING N N 29 
6RA C19 H36 SING N N 30 
6RA C1  H23 SING N N 31 
6RA C1  H22 SING N N 32 
6RA C2  H24 SING N N 33 
6RA C2  H25 SING N N 34 
6RA C3  H4  SING N N 35 
6RA C11 H30 SING N N 36 
6RA C11 H31 SING N N 37 
6RA N12 H32 SING N N 38 
6RA C17 H34 SING N N 39 
6RA N21 H37 SING N N 40 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
6RA SMILES           ACDLabs              12.01 "c1cccc2[NH]c(nc12)NC1CCCc2ccccc21"                                                                                                  
6RA InChI            InChI                1.06  "InChI=1S/C17H17N3/c1-2-8-13-12(6-1)7-5-11-14(13)18-17-19-15-9-3-4-10-16(15)20-17/h1-4,6,8-10,14H,5,7,11H2,(H2,18,19,20)/t14-/m1/s1" 
6RA InChIKey         InChI                1.06  XZIZUQSOFMLIIR-CQSZACIVSA-N                                                                                                          
6RA SMILES_CANONICAL CACTVS               3.385 "C1C[C@@H](Nc2[nH]c3ccccc3n2)c4ccccc4C1"                                                                                             
6RA SMILES           CACTVS               3.385 "C1C[CH](Nc2[nH]c3ccccc3n2)c4ccccc4C1"                                                                                               
6RA SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)CCC[C@H]2Nc3[nH]c4ccccc4n3"                                                                                              
6RA SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)CCCC2Nc3[nH]c4ccccc4n3"                                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
6RA "SYSTEMATIC NAME" ACDLabs              12.01 "N-[(1R)-1,2,3,4-tetrahydronaphthalen-1-yl]-1H-benzimidazol-2-amine"          
6RA "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[(1~{R})-1,2,3,4-tetrahydronaphthalen-1-yl]-1~{H}-benzimidazol-2-amine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
6RA "Create component" 2016-05-31 RCSB 
6RA "Initial release"  2023-05-17 RCSB 
# 
