data_6LA
# 
_chem_comp.id                                    6LA 
_chem_comp.name                                  "methyl 2-(acetylamino)-4,6-O-[(1S)-1-carboxyethylidene]-2-deoxy-beta-D-mannopyranoside" 
_chem_comp.type                                  D-saccharide 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H19 N O8" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-04-28 
_chem_comp.pdbx_modified_date                    2018-08-10 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        305.281 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     6LA 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5JKX 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
6LA C8  C1  C 0 1 N N N 17.418 -18.280 -0.650 -3.353 2.429  1.633  C8  6LA 1  
6LA C7  C2  C 0 1 N N N 17.635 -16.826 -1.151 -3.180 1.452  0.499  C7  6LA 2  
6LA O7  O1  O 0 1 N N N 18.216 -16.131 -0.309 -4.154 0.989  -0.058 O7  6LA 3  
6LA N2  N1  N 0 1 N N N 17.249 -16.365 -2.538 -1.944 1.091  0.103  N2  6LA 4  
6LA C2  C3  C 0 1 N N S 17.480 -14.860 -2.850 -1.775 0.141  -1.000 C2  6LA 5  
6LA C3  C4  C 0 1 N N R 18.424 -14.414 -3.985 -0.408 0.361  -1.659 C3  6LA 6  
6LA O3  O2  O 0 1 N N N 19.696 -14.949 -3.864 -0.291 1.721  -2.081 O3  6LA 7  
6LA C4  C5  C 0 1 N N S 17.750 -14.877 -5.230 0.680  0.047  -0.632 C4  6LA 8  
6LA O4  O3  O 0 1 N N N 18.514 -14.607 -6.493 1.982  0.183  -1.201 O4  6LA 9  
6LA CAB C6  C 0 1 N N S 17.836 -15.029 -7.558 3.033  -0.133 -0.281 CAB 6LA 10 
6LA CAK C7  C 0 1 N N N 18.688 -14.704 -8.750 4.383  -0.007 -0.990 CAK 6LA 11 
6LA CAL C8  C 0 1 N N N 17.732 -16.488 -7.438 2.986  0.827  0.879  CAL 6LA 12 
6LA OAN O4  O 0 1 N N N 16.664 -16.956 -7.855 2.089  1.633  0.961  OAN 6LA 13 
6LA OAM O5  O 0 1 N N N 18.710 -17.113 -6.936 3.941  0.788  1.822  OAM 6LA 14 
6LA O6  O6  O 0 1 N N N 16.541 -14.426 -7.683 2.877  -1.468 0.202  O6  6LA 15 
6LA C6  C9  C 0 1 N N N 15.617 -14.547 -6.574 1.618  -1.724 0.838  C6  6LA 16 
6LA C5  C10 C 0 1 N N R 16.447 -14.070 -5.345 0.503  -1.401 -0.157 C5  6LA 17 
6LA O5  O7  O 0 1 N N N 15.703 -14.333 -4.200 -0.782 -1.536 0.447  O5  6LA 18 
6LA C1  C11 C 0 1 N N R 16.186 -14.057 -3.007 -1.862 -1.287 -0.459 C1  6LA 19 
6LA O1  O8  O 0 1 N N N 15.035 -14.712 -2.430 -3.104 -1.460 0.226  O1  6LA 20 
6LA CAU C12 C 0 1 N N N 13.898 -13.813 -2.280 -3.345 -2.799 0.664  CAU 6LA 21 
6LA H1  H1  H 0 1 N N N 17.833 -18.385 0.363  -3.408 1.885  2.576  H1  6LA 22 
6LA H2  H2  H 0 1 N N N 16.341 -18.504 -0.630 -2.505 3.112  1.656  H2  6LA 23 
6LA H3  H3  H 0 1 N N N 17.925 -18.981 -1.329 -4.273 2.996  1.487  H3  6LA 24 
6LA H4  H4  H 0 1 N N N 16.867 -16.993 -3.216 -1.165 1.460  0.548  H4  6LA 25 
6LA H5  H5  H 0 1 N N N 17.943 -14.461 -1.936 -2.562 0.298  -1.737 H5  6LA 26 
6LA H6  H6  H 0 1 N N N 18.467 -13.315 -3.988 -0.305 -0.300 -2.519 H6  6LA 27 
6LA H7  H7  H 0 1 N N N 20.097 -14.635 -3.062 -0.962 1.992  -2.722 H7  6LA 28 
6LA H8  H8  H 0 1 N N N 17.513 -15.949 -5.156 0.583  0.722  0.218  H8  6LA 29 
6LA H9  H9  H 0 1 N N N 19.675 -15.175 -8.635 5.184  -0.242 -0.290 H9  6LA 30 
6LA H10 H10 H 0 1 N N N 18.204 -15.085 -9.661 4.418  -0.701 -1.830 H10 6LA 31 
6LA H11 H11 H 0 1 N N N 18.809 -13.613 -8.828 4.507  1.012  -1.356 H11 6LA 32 
6LA H12 H12 H 0 1 N N N 18.515 -18.043 -6.916 3.869  1.424  2.547  H12 6LA 33 
6LA H13 H13 H 0 1 N N N 14.737 -13.905 -6.725 1.560  -2.773 1.127  H13 6LA 34 
6LA H14 H14 H 0 1 N N N 15.292 -15.590 -6.447 1.517  -1.093 1.720  H14 6LA 35 
6LA H15 H15 H 0 1 N N N 16.679 -13.000 -5.450 0.572  -2.074 -1.012 H15 6LA 36 
6LA H16 H16 H 0 1 N N N 16.296 -12.996 -2.738 -1.807 -1.992 -1.289 H16 6LA 37 
6LA H17 H17 H 0 1 N N N 13.053 -14.361 -1.838 -2.555 -3.105 1.349  H17 6LA 38 
6LA H18 H18 H 0 1 N N N 14.177 -12.976 -1.622 -4.307 -2.846 1.174  H18 6LA 39 
6LA H19 H19 H 0 1 N N N 13.607 -13.423 -3.266 -3.357 -3.466 -0.198 H19 6LA 40 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
6LA CAK CAB SING N N 1  
6LA OAN CAL DOUB N N 2  
6LA O6  CAB SING N N 3  
6LA O6  C6  SING N N 4  
6LA CAB CAL SING N N 5  
6LA CAB O4  SING N N 6  
6LA CAL OAM SING N N 7  
6LA C6  C5  SING N N 8  
6LA O4  C4  SING N N 9  
6LA C5  C4  SING N N 10 
6LA C5  O5  SING N N 11 
6LA C4  C3  SING N N 12 
6LA O5  C1  SING N N 13 
6LA C3  O3  SING N N 14 
6LA C3  C2  SING N N 15 
6LA C1  C2  SING N N 16 
6LA C1  O1  SING N N 17 
6LA C2  N2  SING N N 18 
6LA N2  C7  SING N N 19 
6LA O1  CAU SING N N 20 
6LA C7  C8  SING N N 21 
6LA C7  O7  DOUB N N 22 
6LA C8  H1  SING N N 23 
6LA C8  H2  SING N N 24 
6LA C8  H3  SING N N 25 
6LA N2  H4  SING N N 26 
6LA C2  H5  SING N N 27 
6LA C3  H6  SING N N 28 
6LA O3  H7  SING N N 29 
6LA C4  H8  SING N N 30 
6LA CAK H9  SING N N 31 
6LA CAK H10 SING N N 32 
6LA CAK H11 SING N N 33 
6LA OAM H12 SING N N 34 
6LA C6  H13 SING N N 35 
6LA C6  H14 SING N N 36 
6LA C5  H15 SING N N 37 
6LA C1  H16 SING N N 38 
6LA CAU H17 SING N N 39 
6LA CAU H18 SING N N 40 
6LA CAU H19 SING N N 41 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
6LA SMILES           ACDLabs              12.01 "CC(=O)NC2C(O)C1OC(C(O)=O)(C)OCC1OC2OC"                                                                                                           
6LA InChI            InChI                1.03  "InChI=1S/C12H19NO8/c1-5(14)13-7-8(15)9-6(20-10(7)18-3)4-19-12(2,21-9)11(16)17/h6-10,15H,4H2,1-3H3,(H,13,14)(H,16,17)/t6-,7+,8-,9-,10-,12+/m1/s1" 
6LA InChIKey         InChI                1.03  KCXDWSUMIHDAQQ-KFRVFMFJSA-N                                                                                                                       
6LA SMILES_CANONICAL CACTVS               3.385 "CO[C@@H]1O[C@@H]2CO[C@@](C)(O[C@H]2[C@H](O)[C@@H]1NC(C)=O)C(O)=O"                                                                                
6LA SMILES           CACTVS               3.385 "CO[CH]1O[CH]2CO[C](C)(O[CH]2[CH](O)[CH]1NC(C)=O)C(O)=O"                                                                                          
6LA SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "CC(=O)N[C@H]1[C@H]([C@H]2[C@@H](CO[C@](O2)(C)C(=O)O)O[C@H]1OC)O"                                                                                 
6LA SMILES           "OpenEye OEToolkits" 2.0.4 "CC(=O)NC1C(C2C(COC(O2)(C)C(=O)O)OC1OC)O"                                                                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
6LA "SYSTEMATIC NAME" ACDLabs              12.01 "methyl 2-(acetylamino)-4,6-O-[(1S)-1-carboxyethylidene]-2-deoxy-beta-D-mannopyranoside"                                                                           
6LA "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "(2~{S},4~{a}~{R},6~{R},7~{S},8~{R},8~{a}~{S})-7-acetamido-6-methoxy-2-methyl-8-oxidanyl-4,4~{a},6,7,8,8~{a}-hexahydropyrano[3,2-d][1,3]dioxine-2-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
6LA "Create component" 2016-04-28 RCSB 
6LA "Initial release"  2018-08-15 RCSB 
# 
