data_5VA
# 
_chem_comp.id                                    5VA 
_chem_comp.name                                  "~{N}-methyl-1-(3-thiophen-3-ylphenyl)methanamine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H13 N S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-12-07 
_chem_comp.pdbx_modified_date                    2023-02-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        203.303 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5VA 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5F57 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5VA C14 C1  C 0 1 N N N 20.899 -6.388  1.444  4.896  1.955  0.372  C14 5VA 1  
5VA N13 N1  N 0 1 N N N 20.107 -7.450  2.039  3.756  1.061  0.612  N13 5VA 2  
5VA C12 C2  C 0 1 N N N 20.123 -8.553  1.121  3.225  0.534  -0.653 C12 5VA 3  
5VA C2  C3  C 0 1 Y N N 19.291 -9.749  1.365  2.059  -0.377 -0.367 C2  5VA 4  
5VA C3  C4  C 0 1 Y N N 18.752 -10.398 0.261  2.273  -1.728 -0.156 C3  5VA 5  
5VA C4  C5  C 0 1 Y N N 17.965 -11.543 0.439  1.208  -2.569 0.107  C4  5VA 6  
5VA C5  C6  C 0 1 Y N N 17.726 -12.029 1.723  -0.076 -2.066 0.159  C5  5VA 7  
5VA C6  C7  C 0 1 Y N N 18.263 -11.384 2.819  -0.298 -0.707 -0.054 C6  5VA 8  
5VA C1  C8  C 0 1 Y N N 19.060 -10.233 2.650  0.780  0.138  -0.312 C1  5VA 9  
5VA C7  C9  C 0 1 Y N N 17.975 -11.963 4.200  -1.676 -0.160 0.001  C7  5VA 10 
5VA C11 C10 C 0 1 Y N N 18.307 -11.343 5.450  -1.952 1.141  -0.201 C11 5VA 11 
5VA S10 S1  S 0 1 Y N N 17.825 -12.312 6.658  -3.685 1.405  -0.057 S10 5VA 12 
5VA C9  C11 C 0 1 Y N N 17.174 -13.551 5.846  -3.952 -0.300 0.277  C9  5VA 13 
5VA C8  C12 C 0 1 Y N N 17.283 -13.310 4.430  -2.793 -0.953 0.260  C8  5VA 14 
5VA H1  H1  H 0 1 N N N 20.913 -5.519  2.118  4.577  2.792  -0.249 H1  5VA 15 
5VA H2  H2  H 0 1 N N N 21.927 -6.744  1.283  5.270  2.331  1.324  H2  5VA 16 
5VA H3  H3  H 0 1 N N N 20.456 -6.097  0.480  5.688  1.405  -0.138 H3  5VA 17 
5VA H4  H4  H 0 1 N N N 19.168 -7.138  2.184  3.034  1.528  1.140  H4  5VA 18 
5VA H6  H6  H 0 1 N N N 21.165 -8.901  1.066  2.894  1.361  -1.281 H6  5VA 19 
5VA H7  H7  H 0 1 N N N 19.818 -8.152  0.143  4.005  -0.026 -1.169 H7  5VA 20 
5VA H8  H8  H 0 1 N N N 18.940 -10.020 -0.733 3.276  -2.126 -0.196 H8  5VA 21 
5VA H9  H9  H 0 1 N N N 17.544 -12.048 -0.418 1.381  -3.623 0.271  H9  5VA 22 
5VA H10 H10 H 0 1 N N N 17.120 -12.912 1.861  -0.908 -2.724 0.363  H10 5VA 23 
5VA H11 H11 H 0 1 N N N 19.486 -9.733  3.507  0.614  1.193  -0.473 H11 5VA 24 
5VA H12 H12 H 0 1 N N N 18.797 -10.388 5.568  -1.221 1.907  -0.418 H12 5VA 25 
5VA H13 H13 H 0 1 N N N 16.726 -14.425 6.297  -4.915 -0.752 0.464  H13 5VA 26 
5VA H14 H14 H 0 1 N N N 16.932 -13.974 3.654  -2.722 -2.016 0.437  H14 5VA 27 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5VA C3  C4  DOUB Y N 1  
5VA C3  C2  SING Y N 2  
5VA C4  C5  SING Y N 3  
5VA C12 C2  SING N N 4  
5VA C12 N13 SING N N 5  
5VA C2  C1  DOUB Y N 6  
5VA C14 N13 SING N N 7  
5VA C5  C6  DOUB Y N 8  
5VA C1  C6  SING Y N 9  
5VA C6  C7  SING N N 10 
5VA C7  C8  SING Y N 11 
5VA C7  C11 DOUB Y N 12 
5VA C8  C9  DOUB Y N 13 
5VA C11 S10 SING Y N 14 
5VA C9  S10 SING Y N 15 
5VA C14 H1  SING N N 16 
5VA C14 H2  SING N N 17 
5VA C14 H3  SING N N 18 
5VA N13 H4  SING N N 19 
5VA C12 H6  SING N N 20 
5VA C12 H7  SING N N 21 
5VA C3  H8  SING N N 22 
5VA C4  H9  SING N N 23 
5VA C5  H10 SING N N 24 
5VA C1  H11 SING N N 25 
5VA C11 H12 SING N N 26 
5VA C9  H13 SING N N 27 
5VA C8  H14 SING N N 28 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5VA InChI            InChI                1.03  "InChI=1S/C12H13NS/c1-13-8-10-3-2-4-11(7-10)12-5-6-14-9-12/h2-7,9,13H,8H2,1H3" 
5VA InChIKey         InChI                1.03  SNXSVYZFYWVLHK-UHFFFAOYSA-N                                                    
5VA SMILES_CANONICAL CACTVS               3.385 "CNCc1cccc(c1)c2cscc2"                                                         
5VA SMILES           CACTVS               3.385 "CNCc1cccc(c1)c2cscc2"                                                         
5VA SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "CNCc1cccc(c1)c2ccsc2"                                                         
5VA SMILES           "OpenEye OEToolkits" 2.0.4 "CNCc1cccc(c1)c2ccsc2"                                                         
# 
_pdbx_chem_comp_identifier.comp_id           5VA 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.4 
_pdbx_chem_comp_identifier.identifier        "~{N}-methyl-1-(3-thiophen-3-ylphenyl)methanamine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5VA "Create component" 2015-12-07 RCSB 
5VA "Initial release"  2023-02-08 RCSB 
# 
