data_3UA
# 
_chem_comp.id                                    3UA 
_chem_comp.name                                  
"(2R,5S)-5-[(1R)-1,2-dihydroxyethyl]-3,3,4,4-tetrafluorotetrahydrofuran-2-yl [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate (non-preferred name)" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C15 H20 F4 N2 O15 P2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-10-31 
_chem_comp.pdbx_modified_date                    2015-01-16 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        606.265 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     3UA 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4RPK 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
3UA F58 F58 F 0 1 N N N 33.250 -1.047 15.946 4.245  -1.046 -2.075 F58 3UA 1  
3UA C11 C11 C 0 1 N N N 33.908 -2.094 16.420 5.111  -0.041 -1.630 C11 3UA 2  
3UA F6  F6  F 0 1 N N N 34.950 -1.706 17.133 5.277  0.943  -2.611 F6  3UA 3  
3UA C12 C12 C 0 1 N N N 34.323 -3.077 15.302 6.476  -0.636 -1.208 C12 3UA 4  
3UA F7  F7  F 0 1 N N N 34.679 -2.485 14.187 6.675  -1.883 -1.810 F7  3UA 5  
3UA F57 F57 F 0 1 N N N 35.350 -3.810 15.730 7.516  0.239  -1.542 F57 3UA 6  
3UA C1  C1  C 0 1 N N R 33.019 -2.948 17.334 4.602  0.581  -0.305 C1  3UA 7  
3UA O   O   O 0 1 N N N 32.243 -3.676 16.355 5.045  -0.358 0.699  O   3UA 8  
3UA C   C   C 0 1 N N S 33.145 -4.059 15.260 6.367  -0.783 0.322  C   3UA 9  
3UA C13 C13 C 0 1 N N R 32.454 -4.257 13.918 6.577  -2.246 0.720  C13 3UA 10 
3UA O15 O15 O 0 1 N N N 32.973 -3.375 12.945 5.654  -3.071 0.005  O15 3UA 11 
3UA C14 C14 C 0 1 N N N 30.976 -4.073 13.958 6.343  -2.404 2.224  C14 3UA 12 
3UA O16 O16 O 0 1 N N N 30.392 -5.353 14.233 6.652  -3.743 2.615  O16 3UA 13 
3UA O1  O1  O 0 1 N N N 32.158 -2.128 18.094 3.177  0.678  -0.309 O1  3UA 14 
3UA P   P   P 0 1 N N N 31.549 -2.658 19.352 2.374  1.825  0.486  P   3UA 15 
3UA O3  O3  O 0 1 N N N 31.987 -1.855 20.417 2.720  3.262  -0.151 O3  3UA 16 
3UA O2  O2  O 0 1 N N N 31.898 -4.145 19.520 2.772  1.808  1.911  O2  3UA 17 
3UA O4  O4  O 0 1 N N N 30.037 -2.462 19.061 0.791  1.552  0.368  O4  3UA 18 
3UA P1  P1  P 0 1 N N N 29.503 -1.314 18.150 -0.501 2.109  1.150  P1  3UA 19 
3UA O6  O6  O 0 1 N N N 29.372 -1.697 16.809 -0.392 3.578  1.300  O6  3UA 20 
3UA O5  O5  O 0 1 N N N 30.285 0.001  18.291 -0.584 1.425  2.605  O5  3UA 21 
3UA O7  O7  O 0 1 N N N 28.096 -1.242 18.738 -1.830 1.753  0.313  O7  3UA 22 
3UA C2  C2  C 0 1 N N N 27.751 -0.642 19.956 -3.132 2.203  0.691  C2  3UA 23 
3UA C3  C3  C 0 1 N N R 26.404 -1.118 20.467 -4.162 1.688  -0.316 C3  3UA 24 
3UA O8  O8  O 0 1 N N N 25.390 -0.918 19.514 -4.316 0.258  -0.191 O8  3UA 25 
3UA C6  C6  C 0 1 N N S 26.364 -2.584 20.773 -5.560 2.265  0.002  C6  3UA 26 
3UA O10 O10 O 0 1 N N N 26.809 -2.857 22.071 -5.839 3.389  -0.835 O10 3UA 27 
3UA C5  C5  C 0 1 N N R 24.934 -2.914 20.604 -6.526 1.102  -0.313 C5  3UA 28 
3UA O9  O9  O 0 1 N N N 24.228 -2.648 21.799 -7.433 1.472  -1.354 O9  3UA 29 
3UA C4  C4  C 0 1 N N R 24.512 -2.008 19.489 -5.599 -0.040 -0.785 C4  3UA 30 
3UA N   N   N 0 1 N N N 24.498 -2.718 18.224 -6.095 -1.332 -0.304 N   3UA 31 
3UA C10 C10 C 0 1 N N N 23.425 -3.380 17.872 -6.460 -2.277 -1.189 C10 3UA 32 
3UA O12 O12 O 0 1 N N N 22.449 -3.415 18.581 -6.374 -2.048 -2.380 O12 3UA 33 
3UA C7  C7  C 0 1 N N N 25.521 -2.722 17.398 -6.178 -1.568 1.041  C7  3UA 34 
3UA C8  C8  C 0 1 N N N 25.478 -3.389 16.227 -6.636 -2.759 1.484  C8  3UA 35 
3UA C9  C9  C 0 1 N N N 24.342 -4.052 15.927 -7.022 -3.742 0.542  C9  3UA 36 
3UA N1  N1  N 0 1 N N N 23.346 -4.033 16.751 -6.920 -3.472 -0.775 N1  3UA 37 
3UA O11 O11 O 0 1 N N N 24.235 -4.671 14.892 -7.438 -4.823 0.917  O11 3UA 38 
3UA H1  H1  H 0 1 N N N 33.630 -3.616 17.959 5.052  1.560  -0.142 H1  3UA 39 
3UA H2  H2  H 0 1 N N N 33.564 -5.040 15.530 7.111  -0.154 0.810  H2  3UA 40 
3UA H3  H3  H 0 1 N N N 32.653 -5.290 13.598 7.596  -2.546 0.477  H3  3UA 41 
3UA H4  H4  H 0 1 N N N 33.917 -3.473 12.900 4.726  -2.860 0.174  H4  3UA 42 
3UA H5  H5  H 0 1 N N N 30.707 -3.359 14.751 6.985  -1.710 2.766  H5  3UA 43 
3UA H6  H6  H 0 1 N N N 30.618 -3.697 12.989 5.299  -2.190 2.454  H6  3UA 44 
3UA H7  H7  H 0 1 N N N 29.446 -5.270 14.265 6.526  -3.916 3.559  H7  3UA 45 
3UA H8  H8  H 0 1 N N N 32.430 -2.396 21.061 2.485  3.345  -1.086 H8  3UA 46 
3UA H9  H9  H 0 1 N N N 30.538 0.314  17.430 -0.658 0.461  2.582  H9  3UA 47 
3UA H10 H10 H 0 1 N N N 28.520 -0.888 20.703 -3.373 1.823  1.684  H10 3UA 48 
3UA H11 H11 H 0 1 N N N 27.712 0.448  19.815 -3.150 3.293  0.705  H11 3UA 49 
3UA H12 H12 H 0 1 N N N 26.167 -0.562 21.386 -3.865 1.952  -1.331 H12 3UA 50 
3UA H13 H13 H 0 1 N N N 26.962 -3.131 20.029 -5.627 2.546  1.053  H13 3UA 51 
3UA H14 H14 H 0 1 N N N 26.770 -3.793 22.229 -6.705 3.791  -0.677 H14 3UA 52 
3UA H15 H15 H 0 1 N N N 24.819 -3.965 20.299 -7.074 0.807  0.582  H15 3UA 53 
3UA H16 H16 H 0 1 N N N 24.523 -3.241 22.480 -7.999 2.225  -1.134 H16 3UA 54 
3UA H17 H17 H 0 1 N N N 23.492 -1.657 19.705 -5.522 -0.043 -1.872 H17 3UA 55 
3UA H18 H18 H 0 1 N N N 26.416 -2.179 17.663 -5.879 -0.806 1.746  H18 3UA 56 
3UA H19 H19 H 0 1 N N N 26.322 -3.392 15.554 -6.707 -2.958 2.543  H19 3UA 57 
3UA H20 H20 H 0 1 N N N 22.506 -4.526 16.524 -7.182 -4.141 -1.427 H20 3UA 58 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
3UA O15 C13 SING N N 1  
3UA C13 C14 SING N N 2  
3UA C13 C   SING N N 3  
3UA C14 O16 SING N N 4  
3UA F7  C12 SING N N 5  
3UA O11 C9  DOUB N N 6  
3UA C   C12 SING N N 7  
3UA C   O   SING N N 8  
3UA C12 F57 SING N N 9  
3UA C12 C11 SING N N 10 
3UA C9  C8  SING N N 11 
3UA C9  N1  SING N N 12 
3UA F58 C11 SING N N 13 
3UA C8  C7  DOUB N N 14 
3UA O   C1  SING N N 15 
3UA C11 F6  SING N N 16 
3UA C11 C1  SING N N 17 
3UA N1  C10 SING N N 18 
3UA O6  P1  DOUB N N 19 
3UA C1  O1  SING N N 20 
3UA C7  N   SING N N 21 
3UA C10 N   SING N N 22 
3UA C10 O12 DOUB N N 23 
3UA O1  P   SING N N 24 
3UA P1  O5  SING N N 25 
3UA P1  O7  SING N N 26 
3UA P1  O4  SING N N 27 
3UA N   C4  SING N N 28 
3UA O7  C2  SING N N 29 
3UA O4  P   SING N N 30 
3UA P   O2  DOUB N N 31 
3UA P   O3  SING N N 32 
3UA C4  O8  SING N N 33 
3UA C4  C5  SING N N 34 
3UA O8  C3  SING N N 35 
3UA C2  C3  SING N N 36 
3UA C3  C6  SING N N 37 
3UA C5  C6  SING N N 38 
3UA C5  O9  SING N N 39 
3UA C6  O10 SING N N 40 
3UA C1  H1  SING N N 41 
3UA C   H2  SING N N 42 
3UA C13 H3  SING N N 43 
3UA O15 H4  SING N N 44 
3UA C14 H5  SING N N 45 
3UA C14 H6  SING N N 46 
3UA O16 H7  SING N N 47 
3UA O3  H8  SING N N 48 
3UA O5  H9  SING N N 49 
3UA C2  H10 SING N N 50 
3UA C2  H11 SING N N 51 
3UA C3  H12 SING N N 52 
3UA C6  H13 SING N N 53 
3UA O10 H14 SING N N 54 
3UA C5  H15 SING N N 55 
3UA O9  H16 SING N N 56 
3UA C4  H17 SING N N 57 
3UA C7  H18 SING N N 58 
3UA C8  H19 SING N N 59 
3UA N1  H20 SING N N 60 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
3UA SMILES           ACDLabs              12.01 "O=C1C=CN(C(=O)N1)C2OC(C(O)C2O)COP(=O)(OP(=O)(OC3OC(C(F)(F)C3(F)F)C(O)CO)O)O" 
3UA InChI            InChI                1.03  
"InChI=1S/C15H20F4N2O15P2/c16-14(17)10(5(23)3-22)34-12(15(14,18)19)35-38(30,31)36-37(28,29)32-4-6-8(25)9(26)11(33-6)21-2-1-7(24)20-13(21)27/h1-2,5-6,8-12,22-23,25-26H,3-4H2,(H,28,29)(H,30,31)(H,20,24,27)/t5-,6-,8-,9-,10+,11-,12-/m1/s1" 
3UA InChIKey         InChI                1.03  QGSSIXQRPAELEQ-UMEAPJPCSA-N 
3UA SMILES_CANONICAL CACTVS               3.385 "OC[C@@H](O)[C@@H]1O[C@H](O[P](O)(=O)O[P](O)(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)N3C=CC(=O)NC3=O)C(F)(F)C1(F)F" 
3UA SMILES           CACTVS               3.385 "OC[CH](O)[CH]1O[CH](O[P](O)(=O)O[P](O)(=O)OC[CH]2O[CH]([CH](O)[CH]2O)N3C=CC(=O)NC3=O)C(F)(F)C1(F)F" 
3UA SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C1=CN(C(=O)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)OP(=O)(O)O[C@@H]3C(C([C@@H](O3)[C@@H](CO)O)(F)F)(F)F)O)O" 
3UA SMILES           "OpenEye OEToolkits" 1.7.6 "C1=CN(C(=O)NC1=O)C2C(C(C(O2)COP(=O)(O)OP(=O)(O)OC3C(C(C(O3)C(CO)O)(F)F)(F)F)O)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
3UA "SYSTEMATIC NAME" ACDLabs              12.01 
"(2R,5S)-5-[(1R)-1,2-dihydroxyethyl]-3,3,4,4-tetrafluorotetrahydrofuran-2-yl [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate (non-preferred name)" 
3UA "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 
"[(2R,5S)-5-[(1R)-1,2-bis(oxidanyl)ethyl]-3,3,4,4-tetrakis(fluoranyl)oxolan-2-yl] [[(2R,3S,4R,5R)-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] hydrogen phosphate"      
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
3UA "Create component" 2014-10-31 RCSB 
3UA "Initial release"  2015-01-21 RCSB 
# 
