data_YS9
# 
_chem_comp.id                                    YS9 
_chem_comp.name                                  "(1R,3R,7E,17beta)-17-[(2R,3S)-3-butyl-6-hydroxy-6-methylheptan-2-yl]-2-methylidene-9,10-secoestra-5,7-diene-1,3-diol" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C31 H52 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-04-29 
_chem_comp.pdbx_modified_date                    2015-04-10 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        472.743 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YS9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3WTQ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YS9 O30 O30 O 0 1 N N N 9.271  -3.779 28.452 -5.502 2.956  2.095  O30 YS9 1  
YS9 C27 C27 C 0 1 N N N 8.819  -2.610 27.673 -5.079 3.283  0.770  C27 YS9 2  
YS9 C29 C29 C 0 1 N N N 7.826  -1.811 28.548 -6.296 3.330  -0.156 C29 YS9 3  
YS9 C28 C28 C 0 1 N N N 8.137  -3.113 26.433 -4.391 4.650  0.777  C28 YS9 4  
YS9 C26 C26 C 0 1 N N N 10.014 -1.725 27.254 -4.098 2.221  0.271  C26 YS9 5  
YS9 C25 C25 C 0 1 N N N 10.892 -1.353 28.442 -4.821 0.878  0.145  C25 YS9 6  
YS9 C20 C20 C 0 1 N N S 12.139 -0.481 28.100 -3.868 -0.160 -0.451 C20 YS9 7  
YS9 C21 C21 C 0 1 N N N 12.855 -0.184 29.414 -4.623 -1.469 -0.689 C21 YS9 8  
YS9 C22 C22 C 0 1 N N N 13.842 -1.282 29.726 -5.678 -1.258 -1.777 C22 YS9 9  
YS9 C23 C23 C 0 1 N N N 15.034 -1.227 28.773 -6.507 -2.534 -1.937 C23 YS9 10 
YS9 C24 C24 C 0 1 N N N 15.673 -2.585 28.545 -7.562 -2.324 -3.026 C24 YS9 11 
YS9 C18 C18 C 0 1 N N R 11.811 0.793  27.316 -2.711 -0.408 0.520  C18 YS9 12 
YS9 C19 C19 C 0 1 N N N 10.738 1.573  28.120 -3.258 -0.984 1.827  C19 YS9 13 
YS9 C17 C17 C 0 1 N N R 13.079 1.583  26.945 -1.727 -1.400 -0.102 C17 YS9 14 
YS9 C16 C16 C 0 1 N N N 14.015 0.885  25.933 -1.207 -0.863 -1.462 C16 YS9 15 
YS9 C15 C15 C 0 1 N N N 14.633 1.998  25.044 0.342  -0.803 -1.345 C15 YS9 16 
YS9 C13 C13 C 0 1 N N R 12.852 2.988  26.354 -0.489 -1.533 0.771  C13 YS9 17 
YS9 C14 C14 C 0 1 N N S 14.216 3.284  25.765 0.639  -1.838 -0.257 C14 YS9 18 
YS9 C34 C34 C 0 1 N N N 11.708 2.968  25.349 -0.192 -0.187 1.435  C34 YS9 19 
YS9 C12 C12 C 0 1 N N N 12.581 4.095  27.348 -0.463 -2.622 1.817  C12 YS9 20 
YS9 C11 C11 C 0 1 N N N 12.561 5.478  26.665 0.839  -2.463 2.621  C11 YS9 21 
YS9 C10 C10 C 0 1 N N N 13.867 5.781  25.968 2.073  -2.565 1.727  C10 YS9 22 
YS9 C9  C9  C 0 1 N N N 14.206 4.609  25.042 1.925  -1.673 0.496  C9  YS9 23 
YS9 C8  C8  C 0 1 N N N 14.472 4.706  23.730 2.866  -0.814 0.119  C8  YS9 24 
YS9 C7  C7  C 0 1 N N N 14.362 5.941  22.946 4.109  -0.696 0.897  C7  YS9 25 
YS9 C6  C6  C 0 1 N N N 14.274 5.968  21.601 5.003  0.235  0.583  C6  YS9 26 
YS9 C1  C1  C 0 1 N N N 14.107 7.298  20.912 6.343  0.281  1.281  C1  YS9 27 
YS9 C2  C2  C 0 1 N N R 14.835 7.368  19.568 7.450  0.233  0.220  C2  YS9 28 
YS9 O32 O32 O 0 1 N N N 16.243 7.353  19.681 7.490  -1.067 -0.373 O32 YS9 29 
YS9 C5  C5  C 0 1 N N N 14.390 4.700  20.761 4.701  1.264  -0.483 C5  YS9 30 
YS9 C4  C4  C 0 1 N N R 14.737 4.794  19.278 5.811  1.213  -1.541 C4  YS9 31 
YS9 O31 O31 O 0 1 N N N 13.899 3.885  18.477 5.686  2.331  -2.422 O31 YS9 32 
YS9 C3  C3  C 0 1 N N N 14.427 6.187  18.789 7.145  1.265  -0.842 C3  YS9 33 
YS9 C33 C33 C 0 1 N N N 13.749 6.351  17.707 8.026  2.183  -1.154 C33 YS9 34 
YS9 H1  H1  H 0 1 N N N 9.706  -3.484 29.243 -6.127 3.588  2.476  H1  YS9 35 
YS9 H2  H2  H 0 1 N N N 8.340  -1.450 29.451 -6.995 4.087  0.199  H2  YS9 36 
YS9 H3  H3  H 0 1 N N N 7.443  -0.953 27.977 -5.973 3.579  -1.167 H3  YS9 37 
YS9 H4  H4  H 0 1 N N N 6.988  -2.462 28.839 -6.786 2.356  -0.162 H4  YS9 38 
YS9 H5  H5  H 0 1 N N N 7.283  -3.746 26.715 -3.524 4.617  1.438  H5  YS9 39 
YS9 H6  H6  H 0 1 N N N 7.780  -2.259 25.839 -4.069 4.900  -0.233 H6  YS9 40 
YS9 H7  H7  H 0 1 N N N 8.849  -3.703 25.837 -5.090 5.407  1.133  H7  YS9 41 
YS9 H8  H8  H 0 1 N N N 10.623 -2.274 26.521 -3.708 2.516  -0.703 H8  YS9 42 
YS9 H9  H9  H 0 1 N N N 9.629  -0.803 26.794 -3.275 2.125  0.978  H9  YS9 43 
YS9 H10 H10 H 0 1 N N N 10.274 -0.795 29.161 -5.148 0.548  1.131  H10 YS9 44 
YS9 H11 H11 H 0 1 N N N 11.246 -2.284 28.908 -5.687 0.992  -0.506 H11 YS9 45 
YS9 H12 H12 H 0 1 N N N 12.811 -1.094 27.481 -3.474 0.209  -1.398 H12 YS9 46 
YS9 H13 H13 H 0 1 N N N 13.390 0.773  29.328 -3.922 -2.241 -1.007 H13 YS9 47 
YS9 H14 H14 H 0 1 N N N 12.115 -0.119 30.225 -5.111 -1.779 0.235  H14 YS9 48 
YS9 H15 H15 H 0 1 N N N 13.342 -2.256 29.622 -6.332 -0.433 -1.495 H15 YS9 49 
YS9 H16 H16 H 0 1 N N N 14.200 -1.162 30.759 -5.185 -1.025 -2.721 H16 YS9 50 
YS9 H17 H17 H 0 1 N N N 15.791 -0.550 29.196 -5.853 -3.360 -2.220 H17 YS9 51 
YS9 H18 H18 H 0 1 N N N 14.691 -0.834 27.805 -7.000 -2.768 -0.994 H18 YS9 52 
YS9 H19 H19 H 0 1 N N N 16.522 -2.480 27.853 -8.152 -3.233 -3.140 H19 YS9 53 
YS9 H20 H20 H 0 1 N N N 16.030 -2.988 29.504 -8.215 -1.499 -2.744 H20 YS9 54 
YS9 H21 H21 H 0 1 N N N 14.930 -3.272 28.113 -7.068 -2.091 -3.969 H21 YS9 55 
YS9 H22 H22 H 0 1 N N N 11.339 0.480  26.373 -2.200 0.533  0.723  H22 YS9 56 
YS9 H23 H23 H 0 1 N N N 9.883  0.913  28.327 -2.435 -1.160 2.519  H23 YS9 57 
YS9 H24 H24 H 0 1 N N N 11.172 1.920  29.069 -3.960 -0.277 2.271  H24 YS9 58 
YS9 H25 H25 H 0 1 N N N 10.399 2.440  27.534 -3.770 -1.925 1.624  H25 YS9 59 
YS9 H26 H26 H 0 1 N N N 13.655 1.716  27.872 -2.202 -2.371 -0.236 H26 YS9 60 
YS9 H27 H27 H 0 1 N N N 13.442 0.180  25.312 -1.497 -1.539 -2.266 H27 YS9 61 
YS9 H28 H28 H 0 1 N N N 14.810 0.342  26.466 -1.608 0.134  -1.648 H28 YS9 62 
YS9 H29 H29 H 0 1 N N N 14.221 1.965  24.025 0.812  -1.086 -2.287 H29 YS9 63 
YS9 H30 H30 H 0 1 N N N 15.728 1.907  25.000 0.667  0.189  -1.033 H30 YS9 64 
YS9 H31 H31 H 0 1 N N N 14.904 3.397  26.615 0.541  -2.850 -0.651 H31 YS9 65 
YS9 H32 H32 H 0 1 N N N 10.765 2.746  25.870 -0.974 0.041  2.160  H32 YS9 66 
YS9 H33 H33 H 0 1 N N N 11.633 3.950  24.859 0.771  -0.237 1.944  H33 YS9 67 
YS9 H34 H34 H 0 1 N N N 11.899 2.194  24.591 -0.161 0.594  0.675  H34 YS9 68 
YS9 H35 H35 H 0 1 N N N 11.605 3.917  27.823 -1.322 -2.519 2.480  H35 YS9 69 
YS9 H36 H36 H 0 1 N N N 13.369 4.087  28.115 -0.484 -3.599 1.335  H36 YS9 70 
YS9 H37 H37 H 0 1 N N N 12.378 6.249  27.428 0.836  -1.490 3.112  H37 YS9 71 
YS9 H38 H38 H 0 1 N N N 11.749 5.496  25.923 0.885  -3.244 3.380  H38 YS9 72 
YS9 H39 H39 H 0 1 N N N 14.665 5.908  26.714 2.952  -2.254 2.291  H39 YS9 73 
YS9 H40 H40 H 0 1 N N N 13.767 6.704  25.378 2.199  -3.600 1.407  H40 YS9 74 
YS9 H41 H41 H 0 1 N N N 14.790 3.811  23.215 2.719  -0.204 -0.760 H41 YS9 75 
YS9 H42 H42 H 0 1 N N N 14.351 6.882  23.476 4.294  -1.365 1.724  H42 YS9 76 
YS9 H43 H43 H 0 1 N N N 14.505 8.086  21.568 6.426  1.205  1.854  H43 YS9 77 
YS9 H44 H44 H 0 1 N N N 13.035 7.472  20.740 6.437  -0.574 1.950  H44 YS9 78 
YS9 H45 H45 H 0 1 N N N 14.509 8.278  19.043 8.411  0.454  0.683  H45 YS9 79 
YS9 H46 H46 H 0 1 N N N 16.529 8.108  20.181 8.168  -1.168 -1.054 H46 YS9 80 
YS9 H47 H47 H 0 1 N N N 13.420 4.186  20.828 3.742  1.037  -0.949 H47 YS9 81 
YS9 H48 H48 H 0 1 N N N 15.167 4.079  21.230 4.665  2.256  -0.034 H48 YS9 82 
YS9 H49 H49 H 0 1 N N N 15.803 4.570  19.129 5.731  0.287  -2.111 H49 YS9 83 
YS9 H50 H50 H 0 1 N N N 14.057 2.988  18.747 6.358  2.362  -3.116 H50 YS9 84 
YS9 H51 H51 H 0 1 N N N 13.486 7.346  17.380 7.798  2.912  -1.918 H51 YS9 85 
YS9 H52 H52 H 0 1 N N N 13.443 5.493  17.126 8.979  2.212  -0.647 H52 YS9 86 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YS9 C33 C3  DOUB N N 1  
YS9 O31 C4  SING N N 2  
YS9 C3  C4  SING N N 3  
YS9 C3  C2  SING N N 4  
YS9 C4  C5  SING N N 5  
YS9 C2  O32 SING N N 6  
YS9 C2  C1  SING N N 7  
YS9 C5  C6  SING N N 8  
YS9 C1  C6  SING N N 9  
YS9 C6  C7  DOUB N N 10 
YS9 C7  C8  SING N N 11 
YS9 C8  C9  DOUB N E 12 
YS9 C9  C14 SING N N 13 
YS9 C9  C10 SING N N 14 
YS9 C15 C14 SING N N 15 
YS9 C15 C16 SING N N 16 
YS9 C34 C13 SING N N 17 
YS9 C14 C13 SING N N 18 
YS9 C16 C17 SING N N 19 
YS9 C10 C11 SING N N 20 
YS9 C13 C17 SING N N 21 
YS9 C13 C12 SING N N 22 
YS9 C28 C27 SING N N 23 
YS9 C11 C12 SING N N 24 
YS9 C17 C18 SING N N 25 
YS9 C26 C27 SING N N 26 
YS9 C26 C25 SING N N 27 
YS9 C18 C20 SING N N 28 
YS9 C18 C19 SING N N 29 
YS9 C27 O30 SING N N 30 
YS9 C27 C29 SING N N 31 
YS9 C20 C25 SING N N 32 
YS9 C20 C21 SING N N 33 
YS9 C24 C23 SING N N 34 
YS9 C23 C22 SING N N 35 
YS9 C21 C22 SING N N 36 
YS9 O30 H1  SING N N 37 
YS9 C29 H2  SING N N 38 
YS9 C29 H3  SING N N 39 
YS9 C29 H4  SING N N 40 
YS9 C28 H5  SING N N 41 
YS9 C28 H6  SING N N 42 
YS9 C28 H7  SING N N 43 
YS9 C26 H8  SING N N 44 
YS9 C26 H9  SING N N 45 
YS9 C25 H10 SING N N 46 
YS9 C25 H11 SING N N 47 
YS9 C20 H12 SING N N 48 
YS9 C21 H13 SING N N 49 
YS9 C21 H14 SING N N 50 
YS9 C22 H15 SING N N 51 
YS9 C22 H16 SING N N 52 
YS9 C23 H17 SING N N 53 
YS9 C23 H18 SING N N 54 
YS9 C24 H19 SING N N 55 
YS9 C24 H20 SING N N 56 
YS9 C24 H21 SING N N 57 
YS9 C18 H22 SING N N 58 
YS9 C19 H23 SING N N 59 
YS9 C19 H24 SING N N 60 
YS9 C19 H25 SING N N 61 
YS9 C17 H26 SING N N 62 
YS9 C16 H27 SING N N 63 
YS9 C16 H28 SING N N 64 
YS9 C15 H29 SING N N 65 
YS9 C15 H30 SING N N 66 
YS9 C14 H31 SING N N 67 
YS9 C34 H32 SING N N 68 
YS9 C34 H33 SING N N 69 
YS9 C34 H34 SING N N 70 
YS9 C12 H35 SING N N 71 
YS9 C12 H36 SING N N 72 
YS9 C11 H37 SING N N 73 
YS9 C11 H38 SING N N 74 
YS9 C10 H39 SING N N 75 
YS9 C10 H40 SING N N 76 
YS9 C8  H41 SING N N 77 
YS9 C7  H42 SING N N 78 
YS9 C1  H43 SING N N 79 
YS9 C1  H44 SING N N 80 
YS9 C2  H45 SING N N 81 
YS9 O32 H46 SING N N 82 
YS9 C5  H47 SING N N 83 
YS9 C5  H48 SING N N 84 
YS9 C4  H49 SING N N 85 
YS9 O31 H50 SING N N 86 
YS9 C33 H51 SING N N 87 
YS9 C33 H52 SING N N 88 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YS9 SMILES           ACDLabs              12.01 "OC3C(=C)\C(O)C/C(=C\C=C1/CCCC2(C)C(C(C)C(CCCC)CCC(O)(C)C)CCC12)C3" 
YS9 InChI            InChI                1.03  
"InChI=1S/C31H52O3/c1-7-8-10-24(16-18-30(4,5)34)21(2)26-14-15-27-25(11-9-17-31(26,27)6)13-12-23-19-28(32)22(3)29(33)20-23/h12-13,21,24,26-29,32-34H,3,7-11,14-20H2,1-2,4-6H3/b25-13+/t21-,24+,26-,27+,28-,29-,31-/m1/s1" 
YS9 InChIKey         InChI                1.03  RSXHMKSDJHHTDU-VWOHJUMJSA-N 
YS9 SMILES_CANONICAL CACTVS               3.385 "CCCC[C@@H](CCC(C)(C)O)[C@@H](C)[C@H]1CC[C@H]2/C(CCC[C@]12C)=C/C=C3C[C@@H](O)C(=C)[C@H](O)C3" 
YS9 SMILES           CACTVS               3.385 "CCCC[CH](CCC(C)(C)O)[CH](C)[CH]1CC[CH]2C(CCC[C]12C)=CC=C3C[CH](O)C(=C)[CH](O)C3" 
YS9 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CCCC[C@@H](CCC(C)(C)O)[C@@H](C)[C@H]1CC[C@@H]\2[C@@]1(CCC/C2=C\C=C3C[C@H](C(=C)[C@@H](C3)O)O)C" 
YS9 SMILES           "OpenEye OEToolkits" 1.7.6 "CCCCC(CCC(C)(C)O)C(C)C1CCC2C1(CCCC2=CC=C3CC(C(=C)C(C3)O)O)C" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YS9 "SYSTEMATIC NAME" ACDLabs              12.01 "(1R,3R,7E,17beta)-17-[(2R,3S)-3-butyl-6-hydroxy-6-methylheptan-2-yl]-2-methylidene-9,10-secoestra-5,7-diene-1,3-diol"                                                                   
YS9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(1R,3R)-5-[(2E)-2-[(1R,3aS,7aR)-1-[(2R,3S)-3-butyl-6-methyl-6-oxidanyl-heptan-2-yl]-7a-methyl-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-2-methylidene-cyclohexane-1,3-diol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YS9 "Create component" 2014-04-29 PDBJ 
YS9 "Initial release"  2015-04-15 RCSB 
# 
